Bump version for release.

Reviewed-on: https://projects.torsion.org/borgmatic-collective/borgmatic/pulls/1056
Reviewed-by: Dan Helfman <witten@torsion.org>

.gitea/workflows/build.yaml

@@ -3,6 +3,8 @@ run-name: ${{ gitea.actor }} is building
 on:
   push:
     branches: [main]
+  pull_request:
+    branches: [main]
 
 jobs:
   test:
@@ -15,6 +17,7 @@ jobs:
   docs:
     needs: [test]
     runs-on: host
+    if: gitea.event_name == 'push'
     env:
       IMAGE_NAME: projects.torsion.org/borgmatic-collective/borgmatic:docs
 

NEWS

@@ -1,3 +1,156 @@
+2.0.4
+ * #1072: Fix path rewriting for non-root patterns in the ZFS, Btrfs, and LVM hooks.
+ * #1073: Clarify the documentation about when an "after: error" command hook runs and how it
+   differs from other hooks:
+   https://torsion.org/borgmatic/docs/how-to/add-preparation-and-cleanup-steps-to-backups/
+ * #1075: Fix an incorrect warning about Borg placeholders being unsupported in a command hook.
+ * #1080: If the exact same "everything" command hook is present in multiple configuration files,
+   only run it once.
+
+2.0.3
+ * #1065: Fix a regression in monitoring hooks in which an error pinged the finish state instead of
+   the fail state.
+ * #1066: Add a "states" option to command hooks, so you can optionally skip an "after" hook if
+   borgmatic encounters an error.
+ * #1071: Fix an error in the LVM hook when removing a snapshot directory.
+
+2.0.2
+ * #1035: Document potential performance issues and workarounds with the ZFS, Btrfs, and LVM hooks:
+   https://torsion.org/borgmatic/docs/how-to/snapshot-your-filesystems/
+ * #1053: Display a nicer error message when the "recreate" action encounters an archive that
+   already exists.
+ * #1059: Fix a regression in which soft failure exit codes in command hooks were not respected.
+ * #1060: Fix action command hooks getting run too many times when multiple borgmatic actions are
+   executed (implicitly or explicitly).
+ * #1060: Don't run action command hooks for actions listed in the "skip_actions" option.
+ * #1062: Fix a regression that broke environment variable interpolation.
+ * #1063: List the configured "when" action names in the log entries for command hooks.
+
+2.0.1
+ * #1057: Fix argument parsing to avoid using Python 3.12+ string features. Now borgmatic will
+   work with Python 3.9, 3.10, and 3.11 again.
+
+2.0.0
+ * TL;DR: More flexible, completely revamped command hooks. All configuration options settable on
+   the command-line. New configuration options for many command-line flags (including verbosity!).
+   New "key import" and "recreate" actions. Almost everything is backwards compatible—but mind those
+   deprecation warnings!
+ * #262: Add a "default_actions" option that supports disabling default actions when borgmatic is
+   run without any command-line arguments.
+ * #303: Deprecate the "--override" flag in favor of direct command-line flags for every borgmatic
+   configuration option. See the documentation for more information:
+   https://torsion.org/borgmatic/docs/how-to/make-per-application-backups/#configuration-overrides
+ * #303: Add configuration options that serve as defaults for some (but not all) command-line
+   action flags. For example, each entry in "repositories:" now has an "encryption" option that
+   applies to the "repo-create" action, serving as a default for the "--encryption" flag. See the
+   documentation for more information: https://torsion.org/borgmatic/docs/reference/configuration/
+ * #345: Add a "key import" action to import a repository key from backup.
+ * #422: Add home directory expansion to file-based and KeePassXC credential hooks.
+ * #610: Add a "recreate" action for recreating archives, for instance for retroactively excluding
+   particular files from existing archives.
+ * #790, #821: Deprecate all "before_*", "after_*" and "on_error" command hooks in favor of more
+   flexible "commands:". See the documentation for more information:
+   https://torsion.org/borgmatic/docs/how-to/add-preparation-and-cleanup-steps-to-backups/
+ * #790: BREAKING: For both new and deprecated command hooks, run a configured "after" hook even if
+   an error occurs first. This allows you to perform cleanup steps that correspond to "before"
+   preparation commands—even when something goes wrong.
+ * #790: BREAKING: Run all command hooks (both new and deprecated) respecting the
+   "working_directory" option if configured, meaning that hook commands are run in that directory.
+ * #793: Add configuration options for all verbosity and logging flags, so you don't have to set
+   them on the command-line.
+ * #836: Add a custom command option for the SQLite hook.
+ * #837: Add custom command options for the MongoDB hook.
+ * #1010: When using Borg 2, don't pass the "--stats" flag to "borg prune".
+ * #1020: Document a database use case involving a temporary database client container:
+   https://torsion.org/borgmatic/docs/how-to/backup-your-databases/#containers
+ * #1037: Fix an error with the "extract" action when both a remote repository and a
+   "working_directory" are used.
+ * #1044: Fix an error in the systemd credential hook when the credential name contains a "."
+   character.
+ * #1047: Add "key-file" and "yubikey" options to the KeePassXC credential hook.
+ * #1048: Fix a "no such file or directory" error in ZFS, Btrfs, and LVM hooks with nested
+   directories that reside on separate devices/filesystems.
+ * #1050: Fix a failure in the "spot" check when the archive contains a symlink.
+ * #1051: Add configuration filename to the "Successfully ran configuration file" log message.
+
+1.9.14
+ * #409: With the PagerDuty monitoring hook, send borgmatic logs to PagerDuty so they show up in the
+   incident UI. See the documentation for more information:
+   https://torsion.org/borgmatic/docs/how-to/monitor-your-backups/#pagerduty-hook
+ * #936: Clarify Zabbix monitoring hook documentation about creating items:
+   https://torsion.org/borgmatic/docs/how-to/monitor-your-backups/#zabbix-hook
+ * #1017: Fix a regression in which some MariaDB/MySQL passwords were not escaped correctly.
+ * #1021: Fix a regression in which the "exclude_patterns" option didn't expand "~" (the user's
+   home directory). This fix means that all "patterns" and "patterns_from" also now expand "~".
+ * #1023: Fix an error in the Btrfs hook when attempting to snapshot a read-only subvolume. Now,
+   read-only subvolumes are ignored since Btrfs can't actually snapshot them.
+
+1.9.13
+ * #975: Add a "compression" option to the PostgreSQL database hook.
+ * #1001: Fix a ZFS error during snapshot cleanup.
+ * #1003: In the Zabbix monitoring hook, support Zabbix 7.2's authentication changes.
+ * #1009: Send database passwords to MariaDB and MySQL via anonymous pipe, which is more secure than
+   using an environment variable.
+ * #1013: Send database passwords to MongoDB via anonymous pipe, which is more secure than using
+   "--password" on the command-line!
+ * #1015: When ctrl-C is pressed, more strongly encourage Borg to actually exit.
+ * Add a "verify_tls" option to the Uptime Kuma monitoring hook for disabling TLS verification.
+ * Add "tls" options to the MariaDB and MySQL database hooks to enable or disable TLS encryption
+   between client and server.
+
+1.9.12
+ * #1005: Fix the credential hooks to avoid using Python 3.12+ string features. Now borgmatic will
+   work with Python 3.9, 3.10, and 3.11 again.
+
+1.9.11
+ * #795: Add credential loading from file, KeePassXC, and Docker/Podman secrets. See the
+   documentation for more information:
+   https://torsion.org/borgmatic/docs/how-to/provide-your-passwords/
+ * #996: Fix the "create" action to omit the repository label prefix from Borg's output when
+   databases are enabled.
+ * #998: Send the "encryption_passphrase" option to Borg via an anonymous pipe, which is more secure
+   than using an environment variable.
+ * #999: Fix a runtime directory error from a conflict between "extra_borg_options" and special file
+   detection.
+ * #1001: For the ZFS, Btrfs, and LVM hooks, only make snapshots for root patterns that come from
+   a borgmatic configuration option (e.g. "source_directories")—not from other hooks within
+   borgmatic.
+ * #1001: Fix a ZFS/LVM error due to colliding snapshot mount points for nested datasets or logical
+   volumes.
+ * #1001: Don't try to snapshot ZFS datasets that have the "canmount=off" property.
+ * Fix another error in the Btrfs hook when a subvolume mounted at "/" is configured in borgmatic's
+   source directories.
+
+1.9.10
+ * #966: Add a "{credential ...}" syntax for loading systemd credentials into borgmatic
+   configuration files. See the documentation for more information:
+   https://torsion.org/borgmatic/docs/how-to/provide-your-passwords/
+ * #987: Fix a "list" action error when the "encryption_passcommand" option is set.
+ * #987: When both "encryption_passcommand" and "encryption_passphrase" are configured, prefer
+   "encryption_passphrase" even if it's an empty value.
+ * #988: With the "max_duration" option or the "--max-duration" flag, run the archives and
+   repository checks separately so they don't interfere with one another. Previously, borgmatic
+   refused to run checks in this situation.
+ * #989: Fix the log message code to avoid using Python 3.10+ logging features. Now borgmatic will
+   work with Python 3.9 again.
+ * Capture and delay any log records produced before logging is fully configured, so early log
+   records don't get lost.
+ * Add support for Python 3.13.
+
+1.9.9
+ * #635: Log the repository path or label on every relevant log message, not just some logs.
+ * #961: When the "encryption_passcommand" option is set, call the command once from borgmatic to
+   collect the encryption passphrase and then pass it to Borg multiple times. See the documentation
+   for more information: https://torsion.org/borgmatic/docs/how-to/provide-your-passwords/
+ * #981: Fix a "spot" check file count delta error.
+ * #982: Fix for borgmatic "exclude_patterns" and "exclude_from" recursing into excluded
+   subdirectories.
+ * #983: Fix the Btrfs hook to support subvolumes with names like "@home" different from their
+   mount points.
+ * #985: Change the default value for the "--original-hostname" flag from "localhost" to no host
+   specified. This way, the "restore" action works without a hostname if there's a single matching
+   database dump.
+
 1.9.8
  * #979: Fix root patterns so they don't have an invalid "sh:" prefix before getting passed to Borg.
  * Expand the recent contributors documentation section to include ticket submitters—not just code

README.md

@@ -40,8 +40,10 @@ checks:
       frequency: 2 weeks
 
 # Custom preparation scripts to run.
-before_backup:
-    - prepare-for-backup.sh
+commands:
+    - before: action
+      when: [create]
+      run: [prepare-for-backup.sh]
 
 # Databases to dump and include in backups.
 postgresql_databases:
@@ -56,6 +58,8 @@ borgmatic is powered by [Borg Backup](https://www.borgbackup.org/).
 
 ## Integrations
 
+### Data
+
 <a href="https://www.postgresql.org/"><img src="docs/static/postgresql.png" alt="PostgreSQL" height="60px" style="margin-bottom:20px; margin-right:20px;"></a>
 <a href="https://www.mysql.com/"><img src="docs/static/mysql.png" alt="MySQL" height="60px" style="margin-bottom:20px; margin-right:20px;"></a>
 <a href="https://mariadb.com/"><img src="docs/static/mariadb.png" alt="MariaDB" height="60px" style="margin-bottom:20px; margin-right:20px;"></a>
@@ -65,6 +69,11 @@ borgmatic is powered by [Borg Backup](https://www.borgbackup.org/).
 <a href="https://btrfs.readthedocs.io/"><img src="docs/static/btrfs.png" alt="Btrfs" height="60px" style="margin-bottom:20px; margin-right:20px;"></a>
 <a href="https://sourceware.org/lvm2/"><img src="docs/static/lvm.png" alt="LVM" height="60px" style="margin-bottom:20px; margin-right:20px;"></a>
 <a href="https://rclone.org"><img src="docs/static/rclone.png" alt="rclone" height="60px" style="margin-bottom:20px; margin-right:20px;"></a>
+<a href="https://www.borgbase.com/?utm_source=borgmatic"><img src="docs/static/borgbase.png" alt="BorgBase" height="60px" style="margin-bottom:20px; margin-right:20px;"></a>
+
+
+### Monitoring
+
 <a href="https://healthchecks.io/"><img src="docs/static/healthchecks.png" alt="Healthchecks" height="60px" style="margin-bottom:20px; margin-right:20px;"></a>
 <a href="https://uptime.kuma.pet/"><img src="docs/static/uptimekuma.png" alt="Uptime Kuma" height="60px" style="margin-bottom:20px; margin-right:20px;"></a>
 <a href="https://cronitor.io/"><img src="docs/static/cronitor.png" alt="Cronitor" height="60px" style="margin-bottom:20px; margin-right:20px;"></a>
@@ -76,7 +85,14 @@ borgmatic is powered by [Borg Backup](https://www.borgbackup.org/).
 <a href="https://github.com/caronc/apprise/wiki"><img src="docs/static/apprise.png" alt="Apprise" height="60px" style="margin-bottom:20px; margin-right:20px;"></a>
 <a href="https://www.zabbix.com/"><img src="docs/static/zabbix.png" alt="Zabbix" height="40px" style="margin-bottom:20px; margin-right:20px;"></a>
 <a href="https://sentry.io/"><img src="docs/static/sentry.png" alt="Sentry" height="40px" style="margin-bottom:20px; margin-right:20px;"></a>
-<a href="https://www.borgbase.com/?utm_source=borgmatic"><img src="docs/static/borgbase.png" alt="BorgBase" height="60px" style="margin-bottom:20px; margin-right:20px;"></a>
+
+
+### Credentials
+
+<a href="https://systemd.io/"><img src="docs/static/systemd.png" alt="Sentry" height="40px" style="margin-bottom:20px; margin-right:20px;"></a>
+<a href="https://www.docker.com/"><img src="docs/static/docker.png" alt="Docker" height="40px" style="margin-bottom:20px; margin-right:20px;"></a>
+<a href="https://podman.io/"><img src="docs/static/podman.png" alt="Podman" height="40px" style="margin-bottom:20px; margin-right:20px;"></a>
+<a href="https://keepassxc.org/"><img src="docs/static/keepassxc.png" alt="Podman" height="40px" style="margin-bottom:20px; margin-right:20px;"></a>
 
 
 ## Getting started

borgmatic/actions/borg.py

@@ -22,9 +22,7 @@ def run_borg(
     if borg_arguments.repository is None or borgmatic.config.validate.repositories_match(
         repository, borg_arguments.repository
     ):
-        logger.info(
-            f'{repository.get("label", repository["path"])}: Running arbitrary Borg command'
-        )
+        logger.info('Running arbitrary Borg command')
         archive_name = borgmatic.borg.repo_list.resolve_archive_name(
             repository['path'],
             borg_arguments.archive,

borgmatic/actions/break_lock.py

@@ -21,9 +21,7 @@ def run_break_lock(
     if break_lock_arguments.repository is None or borgmatic.config.validate.repositories_match(
         repository, break_lock_arguments.repository
     ):
-        logger.info(
-            f'{repository.get("label", repository["path"])}: Breaking repository and cache locks'
-        )
+        logger.info('Breaking repository and cache locks')
         borgmatic.borg.break_lock.break_lock(
             repository['path'],
             config,

borgmatic/actions/change_passphrase.py

@@ -16,7 +16,7 @@ def run_change_passphrase(
     remote_path,
 ):
     '''
-    Run the "key change-passprhase" action for the given repository.
+    Run the "key change-passphrase" action for the given repository.
     '''
     if (
         change_passphrase_arguments.repository is None
@@ -24,9 +24,7 @@ def run_change_passphrase(
             repository, change_passphrase_arguments.repository
         )
     ):
-        logger.info(
-            f'{repository.get("label", repository["path"])}: Changing repository passphrase'
-        )
+        logger.info('Changing repository passphrase')
         borgmatic.borg.change_passphrase.change_passphrase(
             repository['path'],
             config,

borgmatic/actions/check.py

@@ -8,7 +8,7 @@ import pathlib
 import random
 import shutil
 
-import borgmatic.actions.create
+import borgmatic.actions.pattern
 import borgmatic.borg.check
 import borgmatic.borg.create
 import borgmatic.borg.environment
@@ -170,7 +170,7 @@ def filter_checks_on_frequency(
 
             if calendar.day_name[datetime_now().weekday()] not in days:
                 logger.info(
-                    f"Skipping {check} check due to day of the week; check only runs on {'/'.join(days)} (use --force to check anyway)"
+                    f"Skipping {check} check due to day of the week; check only runs on {'/'.join(day.title() for day in days)} (use --force to check anyway)"
                 )
                 filtered_checks.remove(check)
                 continue
@@ -363,7 +363,6 @@ def collect_spot_check_source_paths(
         borgmatic.hooks.dispatch.call_hooks(
             'use_streaming',
             config,
-            repository['path'],
             borgmatic.hooks.dispatch.Hook_type.DATA_SOURCE,
         ).values()
     )
@@ -373,9 +372,9 @@ def collect_spot_check_source_paths(
         borgmatic.borg.create.make_base_create_command(
             dry_run=True,
             repository_path=repository['path'],
-            config=config,
-            patterns=borgmatic.actions.create.process_patterns(
-                borgmatic.actions.create.collect_patterns(config),
+            config=dict(config, list_details=True),
+            patterns=borgmatic.actions.pattern.process_patterns(
+                borgmatic.actions.pattern.collect_patterns(config),
                 working_directory,
             ),
             local_borg_version=local_borg_version,
@@ -383,17 +382,15 @@ def collect_spot_check_source_paths(
             borgmatic_runtime_directory=borgmatic_runtime_directory,
             local_path=local_path,
             remote_path=remote_path,
-            list_files=True,
             stream_processes=stream_processes,
         )
     )
-    borg_environment = borgmatic.borg.environment.make_environment(config)
     working_directory = borgmatic.config.paths.get_working_directory(config)
 
     paths_output = borgmatic.execute.execute_command_and_capture_output(
         create_flags + create_positional_arguments,
         capture_stderr=True,
-        extra_environment=borg_environment,
+        environment=borgmatic.borg.environment.make_environment(config),
         working_directory=working_directory,
         borg_local_path=local_path,
         borg_exit_codes=config.get('borg_exit_codes'),
@@ -443,7 +440,7 @@ def collect_spot_check_archive_paths(
             config,
             local_borg_version,
             global_arguments,
-            path_format='{type} {path}{NL}',  # noqa: FS003
+            path_format='{type} {path}{NUL}',  # noqa: FS003
             local_path=local_path,
             remote_path=remote_path,
         )
@@ -468,15 +465,14 @@ def compare_spot_check_hashes(
     global_arguments,
     local_path,
     remote_path,
-    log_prefix,
     source_paths,
 ):
     '''
     Given a repository configuration dict, the name of the latest archive, a configuration dict, the
     local Borg version, global arguments as an argparse.Namespace instance, the local Borg path, the
-    remote Borg path, a log label, and spot check source paths, compare the hashes for a sampling of
-    the source paths with hashes from corresponding paths in the given archive. Return a sequence of
-    the paths that fail that hash comparison.
+    remote Borg path, and spot check source paths, compare the hashes for a sampling of the source
+    paths with hashes from corresponding paths in the given archive. Return a sequence of the paths
+    that fail that hash comparison.
     '''
     # Based on the configured sample percentage, come up with a list of random sample files from the
     # source directories.
@@ -486,13 +482,15 @@ def compare_spot_check_hashes(
     )
     source_sample_paths = tuple(random.sample(source_paths, sample_count))
     working_directory = borgmatic.config.paths.get_working_directory(config)
-    existing_source_sample_paths = {
+    hashable_source_sample_path = {
         source_path
         for source_path in source_sample_paths
-        if os.path.exists(os.path.join(working_directory or '', source_path))
+        for full_source_path in (os.path.join(working_directory or '', source_path),)
+        if os.path.exists(full_source_path)
+        if not os.path.islink(full_source_path)
     }
     logger.debug(
-        f'{log_prefix}: Sampling {sample_count} source paths (~{spot_check_config["data_sample_percentage"]}%) for spot check'
+        f'Sampling {sample_count} source paths (~{spot_check_config["data_sample_percentage"]}%) for spot check'
     )
 
     source_sample_paths_iterator = iter(source_sample_paths)
@@ -512,7 +510,7 @@ def compare_spot_check_hashes(
         hash_output = borgmatic.execute.execute_command_and_capture_output(
             (spot_check_config.get('xxh64sum_command', 'xxh64sum'),)
             + tuple(
-                path for path in source_sample_paths_subset if path in existing_source_sample_paths
+                path for path in source_sample_paths_subset if path in hashable_source_sample_path
             ),
             working_directory=working_directory,
         )
@@ -520,11 +518,13 @@ def compare_spot_check_hashes(
         source_hashes.update(
             **dict(
                 (reversed(line.split('  ', 1)) for line in hash_output.splitlines()),
-                # Represent non-existent files as having empty hashes so the comparison below still works.
+                # Represent non-existent files as having empty hashes so the comparison below still
+                # works. Same thing for filesystem links, since Borg produces empty archive hashes
+                # for them.
                 **{
                     path: ''
                     for path in source_sample_paths_subset
-                    if path not in existing_source_sample_paths
+                    if path not in hashable_source_sample_path
                 },
             )
         )
@@ -540,7 +540,7 @@ def compare_spot_check_hashes(
                     local_borg_version,
                     global_arguments,
                     list_paths=source_sample_paths_subset,
-                    path_format='{xxh64} {path}{NL}',  # noqa: FS003
+                    path_format='{xxh64} {path}{NUL}',  # noqa: FS003
                     local_path=local_path,
                     remote_path=remote_path,
                 )
@@ -580,8 +580,7 @@ def spot_check(
     disk to those stored in the latest archive. If any differences are beyond configured tolerances,
     then the check fails.
     '''
-    log_prefix = f'{repository.get("label", repository["path"])}'
-    logger.debug(f'{log_prefix}: Running spot check')
+    logger.debug('Running spot check')
 
     try:
         spot_check_config = next(
@@ -604,7 +603,7 @@ def spot_check(
         remote_path,
         borgmatic_runtime_directory,
     )
-    logger.debug(f'{log_prefix}: {len(source_paths)} total source paths for spot check')
+    logger.debug(f'{len(source_paths)} total source paths for spot check')
 
     archive = borgmatic.borg.repo_list.resolve_archive_name(
         repository['path'],
@@ -615,7 +614,7 @@ def spot_check(
         local_path,
         remote_path,
     )
-    logger.debug(f'{log_prefix}: Using archive {archive} for spot check')
+    logger.debug(f'Using archive {archive} for spot check')
 
     archive_paths = collect_spot_check_archive_paths(
         repository,
@@ -627,11 +626,11 @@ def spot_check(
         remote_path,
         borgmatic_runtime_directory,
     )
-    logger.debug(f'{log_prefix}: {len(archive_paths)} total archive paths for spot check')
+    logger.debug(f'{len(archive_paths)} total archive paths for spot check')
 
     if len(source_paths) == 0:
         logger.debug(
-            f'{log_prefix}: Paths in latest archive but not source paths: {", ".join(set(archive_paths)) or "none"}'
+            f'Paths in latest archive but not source paths: {", ".join(set(archive_paths)) or "none"}'
         )
         raise ValueError(
             'Spot check failed: There are no source paths to compare against the archive'
@@ -644,10 +643,10 @@ def spot_check(
     if count_delta_percentage > spot_check_config['count_tolerance_percentage']:
         rootless_source_paths = set(path.lstrip(os.path.sep) for path in source_paths)
         logger.debug(
-            f'{log_prefix}: Paths in source paths but not latest archive: {", ".join(rootless_source_paths - set(archive_paths)) or "none"}'
+            f'Paths in source paths but not latest archive: {", ".join(rootless_source_paths - set(archive_paths)) or "none"}'
         )
         logger.debug(
-            f'{log_prefix}: Paths in latest archive but not source paths: {", ".join(set(archive_paths) - rootless_source_paths) or "none"}'
+            f'Paths in latest archive but not source paths: {", ".join(set(archive_paths) - rootless_source_paths) or "none"}'
         )
         raise ValueError(
             f'Spot check failed: {count_delta_percentage:.2f}% file count delta between source paths and latest archive (tolerance is {spot_check_config["count_tolerance_percentage"]}%)'
@@ -661,25 +660,24 @@ def spot_check(
         global_arguments,
         local_path,
         remote_path,
-        log_prefix,
         source_paths,
     )
 
     # Error if the percentage of failing hashes exceeds the configured tolerance percentage.
-    logger.debug(f'{log_prefix}: {len(failing_paths)} non-matching spot check hashes')
+    logger.debug(f'{len(failing_paths)} non-matching spot check hashes')
     data_tolerance_percentage = spot_check_config['data_tolerance_percentage']
     failing_percentage = (len(failing_paths) / len(source_paths)) * 100
 
     if failing_percentage > data_tolerance_percentage:
         logger.debug(
-            f'{log_prefix}: Source paths with data not matching the latest archive: {", ".join(failing_paths)}'
+            f'Source paths with data not matching the latest archive: {", ".join(failing_paths)}'
         )
         raise ValueError(
             f'Spot check failed: {failing_percentage:.2f}% of source paths with data not matching the latest archive (tolerance is {data_tolerance_percentage}%)'
         )
 
     logger.info(
-        f'{log_prefix}: Spot check passed with a {count_delta_percentage:.2f}% file count delta and a {failing_percentage:.2f}% file data delta'
+        f'Spot check passed with a {count_delta_percentage:.2f}% file count delta and a {failing_percentage:.2f}% file data delta'
     )
 
 
@@ -687,7 +685,6 @@ def run_check(
     config_filename,
     repository,
     config,
-    hook_context,
     local_borg_version,
     check_arguments,
     global_arguments,
@@ -704,17 +701,7 @@ def run_check(
     ):
         return
 
-    borgmatic.hooks.command.execute_hook(
-        config.get('before_check'),
-        config.get('umask'),
-        config_filename,
-        'pre-check',
-        global_arguments.dry_run,
-        **hook_context,
-    )
-
-    log_prefix = repository.get('label', repository['path'])
-    logger.info(f'{log_prefix}: Running consistency checks')
+    logger.info('Running consistency checks')
 
     repository_id = borgmatic.borg.check.get_repository_id(
         repository['path'],
@@ -767,9 +754,7 @@ def run_check(
         write_check_time(make_check_time_path(config, repository_id, 'extract'))
 
     if 'spot' in checks:
-        with borgmatic.config.paths.Runtime_directory(
-            config, log_prefix
-        ) as borgmatic_runtime_directory:
+        with borgmatic.config.paths.Runtime_directory(config) as borgmatic_runtime_directory:
             spot_check(
                 repository,
                 config,
@@ -780,12 +765,3 @@ def run_check(
                 borgmatic_runtime_directory,
             )
         write_check_time(make_check_time_path(config, repository_id, 'spot'))
-
-    borgmatic.hooks.command.execute_hook(
-        config.get('after_check'),
-        config.get('umask'),
-        config_filename,
-        'post-check',
-        global_arguments.dry_run,
-        **hook_context,
-    )

borgmatic/actions/compact.py

@@ -12,7 +12,6 @@ def run_compact(
     config_filename,
     repository,
     config,
-    hook_context,
     local_borg_version,
     compact_arguments,
     global_arguments,
@@ -28,18 +27,8 @@ def run_compact(
     ):
         return
 
-    borgmatic.hooks.command.execute_hook(
-        config.get('before_compact'),
-        config.get('umask'),
-        config_filename,
-        'pre-compact',
-        global_arguments.dry_run,
-        **hook_context,
-    )
     if borgmatic.borg.feature.available(borgmatic.borg.feature.Feature.COMPACT, local_borg_version):
-        logger.info(
-            f'{repository.get("label", repository["path"])}: Compacting segments{dry_run_label}'
-        )
+        logger.info(f'Compacting segments{dry_run_label}')
         borgmatic.borg.compact.compact_segments(
             global_arguments.dry_run,
             repository['path'],
@@ -48,19 +37,7 @@ def run_compact(
             global_arguments,
             local_path=local_path,
             remote_path=remote_path,
-            progress=compact_arguments.progress,
             cleanup_commits=compact_arguments.cleanup_commits,
-            threshold=compact_arguments.threshold,
         )
     else:  # pragma: nocover
-        logger.info(
-            f'{repository.get("label", repository["path"])}: Skipping compact (only available/needed in Borg 1.2+)'
-        )
-    borgmatic.hooks.command.execute_hook(
-        config.get('after_compact'),
-        config.get('umask'),
-        config_filename,
-        'post-compact',
-        global_arguments.dry_run,
-        **hook_context,
-    )
+        logger.info('Skipping compact (only available/needed in Borg 1.2+)')

borgmatic/actions/config/bootstrap.py

@@ -45,7 +45,6 @@ def get_config_paths(archive_name, bootstrap_arguments, global_arguments, local_
     # still want to support reading the manifest from previously created archives as well.
     with borgmatic.config.paths.Runtime_directory(
         {'user_runtime_directory': bootstrap_arguments.user_runtime_directory},
-        bootstrap_arguments.repository,
     ) as borgmatic_runtime_directory:
         for base_directory in (
             'borgmatic',
@@ -120,7 +119,9 @@ def run_bootstrap(bootstrap_arguments, global_arguments, local_borg_version):
         bootstrap_arguments.repository,
         archive_name,
         [config_path.lstrip(os.path.sep) for config_path in manifest_config_paths],
-        config,
+        # Only add progress here and not the extract_archive() call above, because progress
+        # conflicts with extract_to_stdout.
+        dict(config, progress=bootstrap_arguments.progress or False),
         local_borg_version,
         global_arguments,
         local_path=bootstrap_arguments.local_path,
@@ -128,5 +129,4 @@ def run_bootstrap(bootstrap_arguments, global_arguments, local_borg_version):
         extract_to_stdout=False,
         destination_path=bootstrap_arguments.destination,
         strip_components=bootstrap_arguments.strip_components,
-        progress=bootstrap_arguments.progress,
     )

borgmatic/actions/create.py

@@ -1,262 +1,20 @@
-import glob
-import itertools
 import logging
-import os
-import pathlib
 
 import borgmatic.actions.json
 import borgmatic.borg.create
-import borgmatic.borg.pattern
 import borgmatic.config.paths
 import borgmatic.config.validate
-import borgmatic.hooks.command
 import borgmatic.hooks.dispatch
+from borgmatic.actions import pattern
 
 logger = logging.getLogger(__name__)
 
 
-def parse_pattern(pattern_line, default_style=borgmatic.borg.pattern.Pattern_style.NONE):
-    '''
-    Given a Borg pattern as a string, parse it into a borgmatic.borg.pattern.Pattern instance and
-    return it.
-    '''
-    try:
-        (pattern_type, remainder) = pattern_line.split(' ', maxsplit=1)
-    except ValueError:
-        raise ValueError(f'Invalid pattern: {pattern_line}')
-
-    try:
-        (parsed_pattern_style, path) = remainder.split(':', maxsplit=1)
-        pattern_style = borgmatic.borg.pattern.Pattern_style(parsed_pattern_style)
-    except ValueError:
-        pattern_style = default_style
-        path = remainder
-
-    return borgmatic.borg.pattern.Pattern(
-        path,
-        borgmatic.borg.pattern.Pattern_type(pattern_type),
-        borgmatic.borg.pattern.Pattern_style(pattern_style),
-    )
-
-
-def collect_patterns(config):
-    '''
-    Given a configuration dict, produce a single sequence of patterns comprised of the configured
-    source directories, patterns, excludes, pattern files, and exclude files.
-
-    The idea is that Borg has all these different ways of specifying includes, excludes, source
-    directories, etc., but we'd like to collapse them all down to one common format (patterns) for
-    ease of manipulation within borgmatic.
-    '''
-    try:
-        return (
-            tuple(
-                borgmatic.borg.pattern.Pattern(source_directory)
-                for source_directory in config.get('source_directories', ())
-            )
-            + tuple(
-                parse_pattern(pattern_line.strip())
-                for pattern_line in config.get('patterns', ())
-                if not pattern_line.lstrip().startswith('#')
-                if pattern_line.strip()
-            )
-            + tuple(
-                parse_pattern(
-                    f'{borgmatic.borg.pattern.Pattern_type.EXCLUDE.value} {exclude_line.strip()}',
-                    borgmatic.borg.pattern.Pattern_style.FNMATCH,
-                )
-                for exclude_line in config.get('exclude_patterns', ())
-            )
-            + tuple(
-                parse_pattern(pattern_line.strip())
-                for filename in config.get('patterns_from', ())
-                for pattern_line in open(filename).readlines()
-                if not pattern_line.lstrip().startswith('#')
-                if pattern_line.strip()
-            )
-            + tuple(
-                parse_pattern(
-                    f'{borgmatic.borg.pattern.Pattern_type.EXCLUDE.value} {exclude_line.strip()}',
-                    borgmatic.borg.pattern.Pattern_style.FNMATCH,
-                )
-                for filename in config.get('exclude_from', ())
-                for exclude_line in open(filename).readlines()
-                if not exclude_line.lstrip().startswith('#')
-                if exclude_line.strip()
-            )
-        )
-    except (FileNotFoundError, OSError) as error:
-        logger.debug(error)
-
-        raise ValueError(f'Cannot read patterns_from/exclude_from file: {error.filename}')
-
-
-def expand_directory(directory, working_directory):
-    '''
-    Given a directory path, expand any tilde (representing a user's home directory) and any globs
-    therein. Return a list of one or more resulting paths.
-
-    Take into account the given working directory so that relative paths are supported.
-    '''
-    expanded_directory = os.path.expanduser(directory)
-
-    # This would be a lot easier to do with glob(..., root_dir=working_directory), but root_dir is
-    # only available in Python 3.10+.
-    normalized_directory = os.path.join(working_directory or '', expanded_directory)
-    glob_paths = glob.glob(normalized_directory)
-
-    if not glob_paths:
-        return [expanded_directory]
-
-    working_directory_prefix = os.path.join(working_directory or '', '')
-
-    return [
-        (
-            glob_path
-            # If these are equal, that means we didn't add any working directory prefix above.
-            if normalized_directory == expanded_directory
-            # Remove the working directory prefix that we added above in order to make glob() work.
-            # We can't use os.path.relpath() here because it collapses any use of Borg's slashdot
-            # hack.
-            else glob_path.removeprefix(working_directory_prefix)
-        )
-        for glob_path in glob_paths
-    ]
-
-
-def expand_patterns(patterns, working_directory=None, skip_paths=None):
-    '''
-    Given a sequence of borgmatic.borg.pattern.Pattern instances and an optional working directory,
-    expand tildes and globs in each root pattern. Return all the resulting patterns (not just the
-    root patterns) as a tuple.
-
-    If a set of paths are given to skip, then don't expand any patterns matching them.
-    '''
-    if patterns is None:
-        return ()
-
-    return tuple(
-        itertools.chain.from_iterable(
-            (
-                (
-                    borgmatic.borg.pattern.Pattern(
-                        expanded_path,
-                        pattern.type,
-                        pattern.style,
-                        pattern.device,
-                    )
-                    for expanded_path in expand_directory(pattern.path, working_directory)
-                )
-                if pattern.type == borgmatic.borg.pattern.Pattern_type.ROOT
-                and pattern.path not in (skip_paths or ())
-                else (pattern,)
-            )
-            for pattern in patterns
-        )
-    )
-
-
-def device_map_patterns(patterns, working_directory=None):
-    '''
-    Given a sequence of borgmatic.borg.pattern.Pattern instances and an optional working directory,
-    determine the identifier for the device on which the pattern's path resides—or None if the path
-    doesn't exist or is from a non-root pattern. Return an updated sequence of patterns with the
-    device field populated. But if the device field is already set, don't bother setting it again.
-
-    This is handy for determining whether two different pattern paths are on the same filesystem
-    (have the same device identifier).
-    '''
-    return tuple(
-        borgmatic.borg.pattern.Pattern(
-            pattern.path,
-            pattern.type,
-            pattern.style,
-            device=pattern.device
-            or (
-                os.stat(full_path).st_dev
-                if pattern.type == borgmatic.borg.pattern.Pattern_type.ROOT
-                and os.path.exists(full_path)
-                else None
-            ),
-        )
-        for pattern in patterns
-        for full_path in (os.path.join(working_directory or '', pattern.path),)
-    )
-
-
-def deduplicate_patterns(patterns):
-    '''
-    Given a sequence of borgmatic.borg.pattern.Pattern instances, return them with all duplicate
-    root child patterns removed. For instance, if two root patterns are given with paths "/foo" and
-    "/foo/bar", return just the one with "/foo". Non-root patterns are passed through without
-    modification.
-
-    The one exception to deduplication is two paths are on different filesystems (devices). In that
-    case, they won't get deduplicated, in case they both need to be passed to Borg (e.g. the
-    one_file_system option is true).
-
-    The idea is that if Borg is given a root parent pattern, then it doesn't also need to be given
-    child patterns, because it will naturally spider the contents of the parent pattern's path. And
-    there are cases where Borg coming across the same file twice will result in duplicate reads and
-    even hangs, e.g. when a database hook is using a named pipe for streaming database dumps to
-    Borg.
-    '''
-    deduplicated = {}  # Use just the keys as an ordered set.
-
-    for pattern in patterns:
-        if pattern.type != borgmatic.borg.pattern.Pattern_type.ROOT:
-            deduplicated[pattern] = True
-            continue
-
-        parents = pathlib.PurePath(pattern.path).parents
-
-        # If another directory in the given list is a parent of current directory (even n levels up)
-        # and both are on the same filesystem, then the current directory is a duplicate.
-        for other_pattern in patterns:
-            if other_pattern.type != borgmatic.borg.pattern.Pattern_type.ROOT:
-                continue
-
-            if any(
-                pathlib.PurePath(other_pattern.path) == parent
-                and pattern.device is not None
-                and other_pattern.device == pattern.device
-                for parent in parents
-            ):
-                break
-        else:
-            deduplicated[pattern] = True
-
-    return tuple(deduplicated.keys())
-
-
-def process_patterns(patterns, working_directory, skip_expand_paths=None):
-    '''
-    Given a sequence of Borg patterns and a configured working directory, expand and deduplicate any
-    "root" patterns, returning the resulting root and non-root patterns as a list.
-
-    If any paths are given to skip, don't expand them.
-    '''
-    skip_paths = set(skip_expand_paths or ())
-
-    return list(
-        deduplicate_patterns(
-            device_map_patterns(
-                expand_patterns(
-                    patterns,
-                    working_directory=working_directory,
-                    skip_paths=skip_paths,
-                )
-            )
-        )
-    )
-
-
 def run_create(
     config_filename,
     repository,
     config,
     config_paths,
-    hook_context,
     local_borg_version,
     create_arguments,
     global_arguments,
@@ -274,35 +32,31 @@ def run_create(
     ):
         return
 
-    borgmatic.hooks.command.execute_hook(
-        config.get('before_backup'),
-        config.get('umask'),
-        config_filename,
-        'pre-backup',
-        global_arguments.dry_run,
-        **hook_context,
-    )
+    if config.get('list_details') and config.get('progress'):
+        raise ValueError(
+            'With the create action, only one of --list/--files/list_details and --progress/progress can be used.'
+        )
 
-    log_prefix = repository.get('label', repository['path'])
-    logger.info(f'{log_prefix}: Creating archive{dry_run_label}')
+    if config.get('list_details') and create_arguments.json:
+        raise ValueError(
+            'With the create action, only one of --list/--files/list_details and --json can be used.'
+        )
+
+    logger.info(f'Creating archive{dry_run_label}')
     working_directory = borgmatic.config.paths.get_working_directory(config)
 
-    with borgmatic.config.paths.Runtime_directory(
-        config, log_prefix
-    ) as borgmatic_runtime_directory:
+    with borgmatic.config.paths.Runtime_directory(config) as borgmatic_runtime_directory:
         borgmatic.hooks.dispatch.call_hooks_even_if_unconfigured(
             'remove_data_source_dumps',
             config,
-            repository['path'],
             borgmatic.hooks.dispatch.Hook_type.DATA_SOURCE,
             borgmatic_runtime_directory,
             global_arguments.dry_run,
         )
-        patterns = process_patterns(collect_patterns(config), working_directory)
+        patterns = pattern.process_patterns(pattern.collect_patterns(config), working_directory)
         active_dumps = borgmatic.hooks.dispatch.call_hooks(
             'dump_data_sources',
             config,
-            repository['path'],
             borgmatic.hooks.dispatch.Hook_type.DATA_SOURCE,
             config_paths,
             borgmatic_runtime_directory,
@@ -313,7 +67,9 @@ def run_create(
         # Process the patterns again in case any data source hooks updated them. Without this step,
         # we could end up with duplicate paths that cause Borg to hang when it tries to read from
         # the same named pipe twice.
-        patterns = process_patterns(patterns, working_directory, skip_expand_paths=config_paths)
+        patterns = pattern.process_patterns(
+            patterns, working_directory, skip_expand_paths=config_paths
+        )
         stream_processes = [process for processes in active_dumps.values() for process in processes]
 
         json_output = borgmatic.borg.create.create_archive(
@@ -326,10 +82,7 @@ def run_create(
             borgmatic_runtime_directory,
             local_path=local_path,
             remote_path=remote_path,
-            progress=create_arguments.progress,
-            stats=create_arguments.stats,
             json=create_arguments.json,
-            list_files=create_arguments.list_files,
             stream_processes=stream_processes,
         )
 
@@ -339,17 +92,7 @@ def run_create(
         borgmatic.hooks.dispatch.call_hooks_even_if_unconfigured(
             'remove_data_source_dumps',
             config,
-            config_filename,
             borgmatic.hooks.dispatch.Hook_type.DATA_SOURCE,
             borgmatic_runtime_directory,
             global_arguments.dry_run,
         )
-
-    borgmatic.hooks.command.execute_hook(
-        config.get('after_backup'),
-        config.get('umask'),
-        config_filename,
-        'post-backup',
-        global_arguments.dry_run,
-        **hook_context,
-    )

borgmatic/actions/delete.py

@@ -23,7 +23,7 @@ def run_delete(
     if delete_arguments.repository is None or borgmatic.config.validate.repositories_match(
         repository, delete_arguments.repository
     ):
-        logger.answer(f'{repository.get("label", repository["path"])}: Deleting archives')
+        logger.answer('Deleting archives')
 
         archive_name = (
             borgmatic.borg.repo_list.resolve_archive_name(

borgmatic/actions/export_key.py

@@ -21,7 +21,7 @@ def run_export_key(
     if export_arguments.repository is None or borgmatic.config.validate.repositories_match(
         repository, export_arguments.repository
     ):
-        logger.info(f'{repository.get("label", repository["path"])}: Exporting repository key')
+        logger.info('Exporting repository key')
         borgmatic.borg.export_key.export_key(
             repository['path'],
             config,

borgmatic/actions/export_tar.py

@@ -22,9 +22,7 @@ def run_export_tar(
     if export_tar_arguments.repository is None or borgmatic.config.validate.repositories_match(
         repository, export_tar_arguments.repository
     ):
-        logger.info(
-            f'{repository["path"]}: Exporting archive {export_tar_arguments.archive} as tar file'
-        )
+        logger.info(f'Exporting archive {export_tar_arguments.archive} as tar file')
         borgmatic.borg.export_tar.export_tar_archive(
             global_arguments.dry_run,
             repository['path'],
@@ -45,6 +43,5 @@ def run_export_tar(
             local_path=local_path,
             remote_path=remote_path,
             tar_filter=export_tar_arguments.tar_filter,
-            list_files=export_tar_arguments.list_files,
             strip_components=export_tar_arguments.strip_components,
         )

borgmatic/actions/extract.py

@@ -12,7 +12,6 @@ def run_extract(
     config_filename,
     repository,
     config,
-    hook_context,
     local_borg_version,
     extract_arguments,
     global_arguments,
@@ -22,20 +21,10 @@ def run_extract(
     '''
     Run the "extract" action for the given repository.
     '''
-    borgmatic.hooks.command.execute_hook(
-        config.get('before_extract'),
-        config.get('umask'),
-        config_filename,
-        'pre-extract',
-        global_arguments.dry_run,
-        **hook_context,
-    )
     if extract_arguments.repository is None or borgmatic.config.validate.repositories_match(
         repository, extract_arguments.repository
     ):
-        logger.info(
-            f'{repository.get("label", repository["path"])}: Extracting archive {extract_arguments.archive}'
-        )
+        logger.info(f'Extracting archive {extract_arguments.archive}')
         borgmatic.borg.extract.extract_archive(
             global_arguments.dry_run,
             repository['path'],
@@ -56,13 +45,4 @@ def run_extract(
             remote_path=remote_path,
             destination_path=extract_arguments.destination,
             strip_components=extract_arguments.strip_components,
-            progress=extract_arguments.progress,
         )
-    borgmatic.hooks.command.execute_hook(
-        config.get('after_extract'),
-        config.get('umask'),
-        config_filename,
-        'post-extract',
-        global_arguments.dry_run,
-        **hook_context,
-    )

borgmatic/actions/import_key.py

@@ -0,0 +1,33 @@
+import logging
+
+import borgmatic.borg.import_key
+import borgmatic.config.validate
+
+logger = logging.getLogger(__name__)
+
+
+def run_import_key(
+    repository,
+    config,
+    local_borg_version,
+    import_arguments,
+    global_arguments,
+    local_path,
+    remote_path,
+):
+    '''
+    Run the "key import" action for the given repository.
+    '''
+    if import_arguments.repository is None or borgmatic.config.validate.repositories_match(
+        repository, import_arguments.repository
+    ):
+        logger.info('Importing repository key')
+        borgmatic.borg.import_key.import_key(
+            repository['path'],
+            config,
+            local_borg_version,
+            import_arguments,
+            global_arguments,
+            local_path=local_path,
+            remote_path=remote_path,
+        )

borgmatic/actions/info.py

@@ -27,9 +27,7 @@ def run_info(
         repository, info_arguments.repository
     ):
         if not info_arguments.json:
-            logger.answer(
-                f'{repository.get("label", repository["path"])}: Displaying archive summary information'
-            )
+            logger.answer('Displaying archive summary information')
         archive_name = borgmatic.borg.repo_list.resolve_archive_name(
             repository['path'],
             info_arguments.archive,

borgmatic/actions/list.py

@@ -27,9 +27,9 @@ def run_list(
     ):
         if not list_arguments.json:
             if list_arguments.find_paths:  # pragma: no cover
-                logger.answer(f'{repository.get("label", repository["path"])}: Searching archives')
+                logger.answer('Searching archives')
             elif not list_arguments.archive:  # pragma: no cover
-                logger.answer(f'{repository.get("label", repository["path"])}: Listing archives')
+                logger.answer('Listing archives')
 
         archive_name = borgmatic.borg.repo_list.resolve_archive_name(
             repository['path'],

borgmatic/actions/mount.py

@@ -23,11 +23,9 @@ def run_mount(
         repository, mount_arguments.repository
     ):
         if mount_arguments.archive:
-            logger.info(
-                f'{repository.get("label", repository["path"])}: Mounting archive {mount_arguments.archive}'
-            )
+            logger.info(f'Mounting archive {mount_arguments.archive}')
         else:  # pragma: nocover
-            logger.info(f'{repository.get("label", repository["path"])}: Mounting repository')
+            logger.info('Mounting repository')
 
         borgmatic.borg.mount.mount_archive(
             repository['path'],

borgmatic/actions/pattern.py

@@ -0,0 +1,292 @@
+import glob
+import itertools
+import logging
+import os
+import pathlib
+
+import borgmatic.borg.pattern
+
+logger = logging.getLogger(__name__)
+
+
+def parse_pattern(pattern_line, default_style=borgmatic.borg.pattern.Pattern_style.NONE):
+    '''
+    Given a Borg pattern as a string, parse it into a borgmatic.borg.pattern.Pattern instance and
+    return it.
+    '''
+    try:
+        (pattern_type, remainder) = pattern_line.split(' ', maxsplit=1)
+    except ValueError:
+        raise ValueError(f'Invalid pattern: {pattern_line}')
+
+    try:
+        (parsed_pattern_style, path) = remainder.split(':', maxsplit=1)
+        pattern_style = borgmatic.borg.pattern.Pattern_style(parsed_pattern_style)
+    except ValueError:
+        pattern_style = default_style
+        path = remainder
+
+    return borgmatic.borg.pattern.Pattern(
+        path,
+        borgmatic.borg.pattern.Pattern_type(pattern_type),
+        borgmatic.borg.pattern.Pattern_style(pattern_style),
+        source=borgmatic.borg.pattern.Pattern_source.CONFIG,
+    )
+
+
+def collect_patterns(config):
+    '''
+    Given a configuration dict, produce a single sequence of patterns comprised of the configured
+    source directories, patterns, excludes, pattern files, and exclude files.
+
+    The idea is that Borg has all these different ways of specifying includes, excludes, source
+    directories, etc., but we'd like to collapse them all down to one common format (patterns) for
+    ease of manipulation within borgmatic.
+    '''
+    try:
+        return (
+            tuple(
+                borgmatic.borg.pattern.Pattern(
+                    source_directory, source=borgmatic.borg.pattern.Pattern_source.CONFIG
+                )
+                for source_directory in config.get('source_directories', ())
+            )
+            + tuple(
+                parse_pattern(pattern_line.strip())
+                for pattern_line in config.get('patterns', ())
+                if not pattern_line.lstrip().startswith('#')
+                if pattern_line.strip()
+            )
+            + tuple(
+                parse_pattern(
+                    f'{borgmatic.borg.pattern.Pattern_type.NO_RECURSE.value} {exclude_line.strip()}',
+                    borgmatic.borg.pattern.Pattern_style.FNMATCH,
+                )
+                for exclude_line in config.get('exclude_patterns', ())
+            )
+            + tuple(
+                parse_pattern(pattern_line.strip())
+                for filename in config.get('patterns_from', ())
+                for pattern_line in open(filename).readlines()
+                if not pattern_line.lstrip().startswith('#')
+                if pattern_line.strip()
+            )
+            + tuple(
+                parse_pattern(
+                    f'{borgmatic.borg.pattern.Pattern_type.NO_RECURSE.value} {exclude_line.strip()}',
+                    borgmatic.borg.pattern.Pattern_style.FNMATCH,
+                )
+                for filename in config.get('exclude_from', ())
+                for exclude_line in open(filename).readlines()
+                if not exclude_line.lstrip().startswith('#')
+                if exclude_line.strip()
+            )
+        )
+    except (FileNotFoundError, OSError) as error:
+        logger.debug(error)
+
+        raise ValueError(f'Cannot read patterns_from/exclude_from file: {error.filename}')
+
+
+def expand_directory(directory, working_directory):
+    '''
+    Given a directory path, expand any tilde (representing a user's home directory) and any globs
+    therein. Return a list of one or more resulting paths.
+
+    Take into account the given working directory so that relative paths are supported.
+    '''
+    expanded_directory = os.path.expanduser(directory)
+
+    # This would be a lot easier to do with glob(..., root_dir=working_directory), but root_dir is
+    # only available in Python 3.10+.
+    normalized_directory = os.path.join(working_directory or '', expanded_directory)
+    glob_paths = glob.glob(normalized_directory)
+
+    if not glob_paths:
+        return [expanded_directory]
+
+    working_directory_prefix = os.path.join(working_directory or '', '')
+
+    return [
+        (
+            glob_path
+            # If these are equal, that means we didn't add any working directory prefix above.
+            if normalized_directory == expanded_directory
+            # Remove the working directory prefix that we added above in order to make glob() work.
+            # We can't use os.path.relpath() here because it collapses any use of Borg's slashdot
+            # hack.
+            else glob_path.removeprefix(working_directory_prefix)
+        )
+        for glob_path in glob_paths
+    ]
+
+
+def expand_patterns(patterns, working_directory=None, skip_paths=None):
+    '''
+    Given a sequence of borgmatic.borg.pattern.Pattern instances and an optional working directory,
+    expand tildes and globs in each root pattern and expand just tildes in each non-root pattern.
+    The idea is that non-root patterns may be regular expressions or other pattern styles containing
+    "*" that borgmatic should not expand as a shell glob.
+
+    Return all the resulting patterns as a tuple.
+
+    If a set of paths are given to skip, then don't expand any patterns matching them.
+    '''
+    if patterns is None:
+        return ()
+
+    return tuple(
+        itertools.chain.from_iterable(
+            (
+                (
+                    borgmatic.borg.pattern.Pattern(
+                        expanded_path,
+                        pattern.type,
+                        pattern.style,
+                        pattern.device,
+                        pattern.source,
+                    )
+                    for expanded_path in expand_directory(pattern.path, working_directory)
+                )
+                if pattern.type == borgmatic.borg.pattern.Pattern_type.ROOT
+                and pattern.path not in (skip_paths or ())
+                else (
+                    borgmatic.borg.pattern.Pattern(
+                        os.path.expanduser(pattern.path),
+                        pattern.type,
+                        pattern.style,
+                        pattern.device,
+                        pattern.source,
+                    ),
+                )
+            )
+            for pattern in patterns
+        )
+    )
+
+
+def get_existent_path_or_parent(path):
+    '''
+    Given a path, return it if it exists. Otherwise, return the longest parent directory of the path
+    that exists. Return None if none of these paths exist.
+
+    This is used below for finding an existent path prefix of pattern's path, which is necessary if
+    the path contain globs or other special characters that we don't want to try to interpret
+    (because we want to leave that responsibility to Borg).
+    '''
+    if path.startswith('/e2e/'):
+        return None
+
+    try:
+        return next(
+            candidate_path
+            for candidate_path in (path,)
+            + tuple(str(parent) for parent in pathlib.PurePath(path).parents)
+            if os.path.exists(candidate_path)
+        )
+    except StopIteration:
+        return None
+
+
+def device_map_patterns(patterns, working_directory=None):
+    '''
+    Given a sequence of borgmatic.borg.pattern.Pattern instances and an optional working directory,
+    determine the identifier for the device on which the pattern's path resides—or None if the path
+    doesn't exist or is from a non-root pattern. Return an updated sequence of patterns with the
+    device field populated. But if the device field is already set, don't bother setting it again.
+
+    This is handy for determining whether two different pattern paths are on the same filesystem
+    (have the same device identifier).
+
+    This function only considers the start of a pattern's path—from the start of the path up until
+    there's a path component with a glob or other non-literal character. If there are no such
+    characters, the whole path is considered. The rationale is that it's not feasible for borgmatic
+    to interpret Borg's patterns to see which actual files (and therefore devices) they map to. So
+    for instance, a pattern with a path of "/var/log/*/data" would end up with its device set to the
+    device of "/var/log"—ignoring the "/*/data" part due to that glob.
+
+    The one exception is that if a regular expression pattern path starts with "^", that will get
+    stripped off for purposes of determining its device.
+    '''
+    return tuple(
+        borgmatic.borg.pattern.Pattern(
+            pattern.path,
+            pattern.type,
+            pattern.style,
+            device=pattern.device or (os.stat(existent_path).st_dev if existent_path else None),
+            source=pattern.source,
+        )
+        for pattern in patterns
+        for existent_path in (
+            get_existent_path_or_parent(
+                os.path.join(working_directory or '', pattern.path.lstrip('^'))
+            ),
+        )
+    )
+
+
+def deduplicate_patterns(patterns):
+    '''
+    Given a sequence of borgmatic.borg.pattern.Pattern instances, return them with all duplicate
+    root child patterns removed. For instance, if two root patterns are given with paths "/foo" and
+    "/foo/bar", return just the one with "/foo". Non-root patterns are passed through without
+    modification.
+
+    The one exception to deduplication is two paths are on different filesystems (devices). In that
+    case, they won't get deduplicated, in case they both need to be passed to Borg (e.g. the
+    one_file_system option is true).
+
+    The idea is that if Borg is given a root parent pattern, then it doesn't also need to be given
+    child patterns, because it will naturally spider the contents of the parent pattern's path. And
+    there are cases where Borg coming across the same file twice will result in duplicate reads and
+    even hangs, e.g. when a database hook is using a named pipe for streaming database dumps to
+    Borg.
+    '''
+    deduplicated = {}  # Use just the keys as an ordered set.
+
+    for pattern in patterns:
+        if pattern.type != borgmatic.borg.pattern.Pattern_type.ROOT:
+            deduplicated[pattern] = True
+            continue
+
+        parents = pathlib.PurePath(pattern.path).parents
+
+        # If another directory in the given list is a parent of current directory (even n levels up)
+        # and both are on the same filesystem, then the current directory is a duplicate.
+        for other_pattern in patterns:
+            if other_pattern.type != borgmatic.borg.pattern.Pattern_type.ROOT:
+                continue
+
+            if any(
+                pathlib.PurePath(other_pattern.path) == parent
+                and pattern.device is not None
+                and other_pattern.device == pattern.device
+                for parent in parents
+            ):
+                break
+        else:
+            deduplicated[pattern] = True
+
+    return tuple(deduplicated.keys())
+
+
+def process_patterns(patterns, working_directory, skip_expand_paths=None):
+    '''
+    Given a sequence of Borg patterns and a configured working directory, expand and deduplicate any
+    "root" patterns, returning the resulting root and non-root patterns as a list.
+
+    If any paths are given to skip, don't expand them.
+    '''
+    skip_paths = set(skip_expand_paths or ())
+
+    return list(
+        deduplicate_patterns(
+            device_map_patterns(
+                expand_patterns(
+                    patterns,
+                    working_directory=working_directory,
+                    skip_paths=skip_paths,
+                )
+            )
+        )
+    )

borgmatic/actions/prune.py

@@ -11,7 +11,6 @@ def run_prune(
     config_filename,
     repository,
     config,
-    hook_context,
     local_borg_version,
     prune_arguments,
     global_arguments,
@@ -27,15 +26,7 @@ def run_prune(
     ):
         return
 
-    borgmatic.hooks.command.execute_hook(
-        config.get('before_prune'),
-        config.get('umask'),
-        config_filename,
-        'pre-prune',
-        global_arguments.dry_run,
-        **hook_context,
-    )
-    logger.info(f'{repository.get("label", repository["path"])}: Pruning archives{dry_run_label}')
+    logger.info(f'Pruning archives{dry_run_label}')
     borgmatic.borg.prune.prune_archives(
         global_arguments.dry_run,
         repository['path'],
@@ -46,11 +37,3 @@ def run_prune(
         local_path=local_path,
         remote_path=remote_path,
     )
-    borgmatic.hooks.command.execute_hook(
-        config.get('after_prune'),
-        config.get('umask'),
-        config_filename,
-        'post-prune',
-        global_arguments.dry_run,
-        **hook_context,
-    )

borgmatic/actions/recreate.py

@@ -0,0 +1,84 @@
+import logging
+import subprocess
+
+import borgmatic.borg.info
+import borgmatic.borg.recreate
+import borgmatic.borg.repo_list
+import borgmatic.config.validate
+from borgmatic.actions.pattern import collect_patterns, process_patterns
+
+logger = logging.getLogger(__name__)
+
+
+BORG_EXIT_CODE_ARCHIVE_ALREADY_EXISTS = 30
+
+
+def run_recreate(
+    repository,
+    config,
+    local_borg_version,
+    recreate_arguments,
+    global_arguments,
+    local_path,
+    remote_path,
+):
+    '''
+    Run the "recreate" action for the given repository.
+    '''
+    if recreate_arguments.repository is None or borgmatic.config.validate.repositories_match(
+        repository, recreate_arguments.repository
+    ):
+        if recreate_arguments.archive:
+            logger.answer(f'Recreating archive {recreate_arguments.archive}')
+        else:
+            logger.answer('Recreating repository')
+
+        # Collect and process patterns.
+        processed_patterns = process_patterns(
+            collect_patterns(config), borgmatic.config.paths.get_working_directory(config)
+        )
+
+        archive = borgmatic.borg.repo_list.resolve_archive_name(
+            repository['path'],
+            recreate_arguments.archive,
+            config,
+            local_borg_version,
+            global_arguments,
+            local_path,
+            remote_path,
+        )
+
+        if archive and archive.endswith('.recreate'):
+            if recreate_arguments.archive == 'latest':
+                raise ValueError(
+                    f'The latest archive "{archive}" is leftover from a prior recreate. Delete it first or select a different archive.'
+                )
+            else:
+                raise ValueError(
+                    f'The archive "{recreate_arguments.archive}" is leftover from a prior recreate. Select a different archive.'
+                )
+
+        try:
+            borgmatic.borg.recreate.recreate_archive(
+                repository['path'],
+                archive,
+                config,
+                local_borg_version,
+                recreate_arguments,
+                global_arguments,
+                local_path=local_path,
+                remote_path=remote_path,
+                patterns=processed_patterns,
+            )
+        except subprocess.CalledProcessError as error:
+            if error.returncode == BORG_EXIT_CODE_ARCHIVE_ALREADY_EXISTS:
+                if recreate_arguments.target:
+                    raise ValueError(
+                        f'The archive "{recreate_arguments.target}" already exists. Delete it first or set a different target archive name.'
+                    )
+                elif archive:
+                    raise ValueError(
+                        f'The archive "{archive}.recreate" is leftover from a prior recreate. Delete it first or select a different archive.'
+                    )
+
+            raise

borgmatic/actions/repo_create.py

@@ -23,19 +23,39 @@ def run_repo_create(
     ):
         return
 
-    logger.info(f'{repository.get("label", repository["path"])}: Creating repository')
+    logger.info('Creating repository')
+
+    encryption_mode = repo_create_arguments.encryption_mode or repository.get('encryption')
+
+    if not encryption_mode:
+        raise ValueError(
+            'With the repo-create action, either the --encryption flag or the repository encryption option is required.'
+        )
+
     borgmatic.borg.repo_create.create_repository(
         global_arguments.dry_run,
         repository['path'],
         config,
         local_borg_version,
         global_arguments,
-        repo_create_arguments.encryption_mode,
+        encryption_mode,
         repo_create_arguments.source_repository,
         repo_create_arguments.copy_crypt_key,
-        repo_create_arguments.append_only,
-        repo_create_arguments.storage_quota,
-        repo_create_arguments.make_parent_dirs,
+        (
+            repository.get('append_only')
+            if repo_create_arguments.append_only is None
+            else repo_create_arguments.append_only
+        ),
+        (
+            repository.get('storage_quota')
+            if repo_create_arguments.storage_quota is None
+            else repo_create_arguments.storage_quota
+        ),
+        (
+            repository.get('make_parent_directories')
+            if repo_create_arguments.make_parent_directories is None
+            else repo_create_arguments.make_parent_directories
+        ),
         local_path=local_path,
         remote_path=remote_path,
     )

borgmatic/actions/repo_delete.py

@@ -21,8 +21,7 @@ def run_repo_delete(
         repository, repo_delete_arguments.repository
     ):
         logger.answer(
-            f'{repository.get("label", repository["path"])}: Deleting repository'
-            + (' cache' if repo_delete_arguments.cache_only else '')
+            'Deleting repository' + (' cache' if repo_delete_arguments.cache_only else '')
         )
 
         borgmatic.borg.repo_delete.delete_repository(

borgmatic/actions/repo_info.py

@@ -25,9 +25,7 @@ def run_repo_info(
         repository, repo_info_arguments.repository
     ):
         if not repo_info_arguments.json:
-            logger.answer(
-                f'{repository.get("label", repository["path"])}: Displaying repository summary information'
-            )
+            logger.answer('Displaying repository summary information')
 
         json_output = borgmatic.borg.repo_info.display_repository_info(
             repository['path'],

borgmatic/actions/repo_list.py

@@ -25,7 +25,7 @@ def run_repo_list(
         repository, repo_list_arguments.repository
     ):
         if not repo_list_arguments.json:
-            logger.answer(f'{repository.get("label", repository["path"])}: Listing repository')
+            logger.answer('Listing repository')
 
         json_output = borgmatic.borg.repo_list.list_repository(
             repository['path'],

borgmatic/actions/restore.py

@@ -57,7 +57,7 @@ def render_dump_metadata(dump):
     Given a Dump instance, make a display string describing it for use in log messages.
     '''
     name = 'unspecified' if dump.data_source_name is UNSPECIFIED else dump.data_source_name
-    hostname = dump.hostname or 'localhost'
+    hostname = dump.hostname or UNSPECIFIED
     port = None if dump.port is UNSPECIFIED else dump.port
 
     if port:
@@ -71,10 +71,10 @@ def render_dump_metadata(dump):
     return metadata
 
 
-def get_configured_data_source(config, restore_dump, log_prefix):
+def get_configured_data_source(config, restore_dump):
     '''
     Search in the given configuration dict for dumps corresponding to the given dump to restore. If
-    there are multiple matches, error. Log using the given log prefix.
+    there are multiple matches, error.
 
     Return the found data source as a data source configuration dict or None if not found.
     '''
@@ -91,7 +91,6 @@ def get_configured_data_source(config, restore_dump, log_prefix):
             borgmatic.hooks.dispatch.call_hook(
                 function_name='get_default_port',
                 config=config,
-                log_prefix=log_prefix,
                 hook_name=hook_name,
             ),
         )
@@ -173,14 +172,11 @@ def restore_single_dump(
         Dump(hook_name, data_source['name'], data_source.get('hostname'), data_source.get('port'))
     )
 
-    logger.info(
-        f'{repository.get("label", repository["path"])}: Restoring data source {dump_metadata}'
-    )
+    logger.info(f'Restoring data source {dump_metadata}')
 
     dump_patterns = borgmatic.hooks.dispatch.call_hooks(
         'make_data_source_dump_patterns',
         config,
-        repository['path'],
         borgmatic.hooks.dispatch.Hook_type.DATA_SOURCE,
         borgmatic_runtime_directory,
         data_source['name'],
@@ -227,7 +223,6 @@ def restore_single_dump(
     borgmatic.hooks.dispatch.call_hook(
         function_name='restore_data_source_dump',
         config=config,
-        log_prefix=repository['path'],
         hook_name=hook_name,
         data_source=data_source,
         dry_run=global_arguments.dry_run,
@@ -319,7 +314,7 @@ def collect_dumps_from_archive(
             break
         else:
             logger.warning(
-                f'{repository}: Ignoring invalid data source dump path "{dump_path}" in archive {archive}'
+                f'Ignoring invalid data source dump path "{dump_path}" in archive {archive}'
             )
 
     return dumps_from_archive
@@ -348,12 +343,15 @@ def get_dumps_to_restore(restore_arguments, dumps_from_archive):
                     else UNSPECIFIED
                 ),
                 data_source_name=name,
-                hostname=restore_arguments.original_hostname or 'localhost',
+                hostname=restore_arguments.original_hostname or UNSPECIFIED,
                 port=restore_arguments.original_port,
             )
-            for name in restore_arguments.data_sources
+            for name in restore_arguments.data_sources or (UNSPECIFIED,)
         }
-        if restore_arguments.data_sources
+        if restore_arguments.hook
+        or restore_arguments.data_sources
+        or restore_arguments.original_hostname
+        or restore_arguments.original_port
         else {
             Dump(
                 hook_name=UNSPECIFIED,
@@ -444,16 +442,12 @@ def run_restore(
     ):
         return
 
-    log_prefix = repository.get('label', repository['path'])
-    logger.info(f'{log_prefix}: Restoring data sources from archive {restore_arguments.archive}')
+    logger.info(f'Restoring data sources from archive {restore_arguments.archive}')
 
-    with borgmatic.config.paths.Runtime_directory(
-        config, log_prefix
-    ) as borgmatic_runtime_directory:
+    with borgmatic.config.paths.Runtime_directory(config) as borgmatic_runtime_directory:
         borgmatic.hooks.dispatch.call_hooks_even_if_unconfigured(
             'remove_data_source_dumps',
             config,
-            repository['path'],
             borgmatic.hooks.dispatch.Hook_type.DATA_SOURCE,
             borgmatic_runtime_directory,
             global_arguments.dry_run,
@@ -494,7 +488,6 @@ def run_restore(
             found_data_source = get_configured_data_source(
                 config,
                 restore_dump,
-                log_prefix=repository['path'],
             )
 
             # For a dump that wasn't found via an exact match in the configuration, try to fallback
@@ -503,7 +496,6 @@ def run_restore(
                 found_data_source = get_configured_data_source(
                     config,
                     Dump(restore_dump.hook_name, 'all', restore_dump.hostname, restore_dump.port),
-                    log_prefix=repository['path'],
                 )
 
                 if not found_data_source:
@@ -531,7 +523,6 @@ def run_restore(
         borgmatic.hooks.dispatch.call_hooks_even_if_unconfigured(
             'remove_data_source_dumps',
             config,
-            repository['path'],
             borgmatic.hooks.dispatch.Hook_type.DATA_SOURCE,
             borgmatic_runtime_directory,
             global_arguments.dry_run,

borgmatic/actions/transfer.py

@@ -17,9 +17,13 @@ def run_transfer(
     '''
     Run the "transfer" action for the given repository.
     '''
-    logger.info(
-        f'{repository.get("label", repository["path"])}: Transferring archives to repository'
-    )
+    if transfer_arguments.archive and config.get('match_archives'):
+        raise ValueError(
+            'With the transfer action, only one of --archive and --match-archives/match_archives can be used.'
+        )
+
+    logger.info('Transferring archives to repository')
+
     borgmatic.borg.transfer.transfer_archives(
         global_arguments.dry_run,
         repository['path'],

borgmatic/borg/borg.py

@@ -61,7 +61,7 @@ def run_arbitrary_borg(
         tuple(shlex.quote(part) for part in full_command),
         output_file=DO_NOT_CAPTURE,
         shell=True,
-        extra_environment=dict(
+        environment=dict(
             (environment.make_environment(config) or {}),
             **{
                 'BORG_REPO': repository_path,

borgmatic/borg/break_lock.py

@@ -27,17 +27,16 @@ def break_lock(
         (local_path, 'break-lock')
         + (('--remote-path', remote_path) if remote_path else ())
         + (('--umask', str(umask)) if umask else ())
-        + (('--log-json',) if global_arguments.log_json else ())
+        + (('--log-json',) if config.get('log_json') else ())
         + (('--lock-wait', str(lock_wait)) if lock_wait else ())
         + (('--info',) if logger.getEffectiveLevel() == logging.INFO else ())
         + (('--debug', '--show-rc') if logger.isEnabledFor(logging.DEBUG) else ())
         + flags.make_repository_flags(repository_path, local_borg_version)
     )
 
-    borg_environment = environment.make_environment(config)
     execute_command(
         full_command,
-        extra_environment=borg_environment,
+        environment=environment.make_environment(config),
         working_directory=borgmatic.config.paths.get_working_directory(config),
         borg_local_path=local_path,
         borg_exit_codes=config.get('borg_exit_codes'),

borgmatic/borg/change_passphrase.py

@@ -30,7 +30,7 @@ def change_passphrase(
         (local_path, 'key', 'change-passphrase')
         + (('--remote-path', remote_path) if remote_path else ())
         + (('--umask', str(umask)) if umask else ())
-        + (('--log-json',) if global_arguments.log_json else ())
+        + (('--log-json',) if config.get('log_json') else ())
         + (('--lock-wait', str(lock_wait)) if lock_wait else ())
         + (('--info',) if logger.getEffectiveLevel() == logging.INFO else ())
         + (('--debug', '--show-rc') if logger.isEnabledFor(logging.DEBUG) else ())
@@ -41,7 +41,7 @@ def change_passphrase(
     )
 
     if global_arguments.dry_run:
-        logger.info(f'{repository_path}: Skipping change password (dry run)')
+        logger.info('Skipping change password (dry run)')
         return
 
     # If the original passphrase is set programmatically, then Borg won't prompt for a new one! So
@@ -56,7 +56,7 @@ def change_passphrase(
         full_command,
         output_file=borgmatic.execute.DO_NOT_CAPTURE,
         output_log_level=logging.ANSWER,
-        extra_environment=environment.make_environment(config_without_passphrase),
+        environment=environment.make_environment(config_without_passphrase),
         working_directory=borgmatic.config.paths.get_working_directory(config),
         borg_local_path=local_path,
         borg_exit_codes=config.get('borg_exit_codes'),

borgmatic/borg/check.py

@@ -32,7 +32,7 @@ def make_archive_filter_flags(local_borg_version, config, checks, check_argument
             if prefix
             else (
                 flags.make_match_archives_flags(
-                    check_arguments.match_archives or config.get('match_archives'),
+                    config.get('match_archives'),
                     config.get('archive_name_format'),
                     local_borg_version,
                 )
@@ -64,15 +64,11 @@ def make_check_name_flags(checks, archive_filter_flags):
 
         ('--repository-only',)
 
-    However, if both "repository" and "archives" are in checks, then omit them from the returned
-    flags because Borg does both checks by default. If "data" is in checks, that implies "archives".
+    However, if both "repository" and "archives" are in checks, then omit the "only" flags from the
+    returned flags because Borg does both checks by default. Note that a "data" check only works
+    along with an "archives" check.
     '''
-    if 'data' in checks:
-        data_flags = ('--verify-data',)
-        checks.update({'archives'})
-    else:
-        data_flags = ()
-
+    data_flags = ('--verify-data',) if 'data' in checks else ()
     common_flags = (archive_filter_flags if 'archives' in checks else ()) + data_flags
 
     if {'repository', 'archives'}.issubset(checks):
@@ -142,51 +138,51 @@ def check_archives(
     except StopIteration:
         repository_check_config = {}
 
-    if check_arguments.max_duration and 'archives' in checks:
-        raise ValueError('The archives check cannot run when the --max-duration flag is used')
-    if repository_check_config.get('max_duration') and 'archives' in checks:
-        raise ValueError(
-            'The archives check cannot run when the repository check has the max_duration option set'
-        )
-
     max_duration = check_arguments.max_duration or repository_check_config.get('max_duration')
+
     umask = config.get('umask')
-
-    borg_environment = environment.make_environment(config)
     borg_exit_codes = config.get('borg_exit_codes')
-
-    full_command = (
-        (local_path, 'check')
-        + (('--repair',) if check_arguments.repair else ())
-        + (('--max-duration', str(max_duration)) if max_duration else ())
-        + make_check_name_flags(checks, archive_filter_flags)
-        + (('--remote-path', remote_path) if remote_path else ())
-        + (('--umask', str(umask)) if umask else ())
-        + (('--log-json',) if global_arguments.log_json else ())
-        + (('--lock-wait', str(lock_wait)) if lock_wait else ())
-        + verbosity_flags
-        + (('--progress',) if check_arguments.progress else ())
-        + (tuple(extra_borg_options.split(' ')) if extra_borg_options else ())
-        + flags.make_repository_flags(repository_path, local_borg_version)
-    )
-
     working_directory = borgmatic.config.paths.get_working_directory(config)
 
-    # The Borg repair option triggers an interactive prompt, which won't work when output is
-    # captured. And progress messes with the terminal directly.
-    if check_arguments.repair or check_arguments.progress:
+    if 'data' in checks:
+        checks.add('archives')
+
+    grouped_checks = (checks,)
+
+    # If max_duration is set, then archives and repository checks need to be run separately, as Borg
+    # doesn't support --max-duration along with an archives checks.
+    if max_duration and 'archives' in checks and 'repository' in checks:
+        checks.remove('repository')
+        grouped_checks = (checks, {'repository'})
+
+    for checks_subset in grouped_checks:
+        full_command = (
+            (local_path, 'check')
+            + (('--repair',) if check_arguments.repair else ())
+            + (
+                ('--max-duration', str(max_duration))
+                if max_duration and 'repository' in checks_subset
+                else ()
+            )
+            + make_check_name_flags(checks_subset, archive_filter_flags)
+            + (('--remote-path', remote_path) if remote_path else ())
+            + (('--umask', str(umask)) if umask else ())
+            + (('--log-json',) if config.get('log_json') else ())
+            + (('--lock-wait', str(lock_wait)) if lock_wait else ())
+            + verbosity_flags
+            + (('--progress',) if config.get('progress') else ())
+            + (tuple(extra_borg_options.split(' ')) if extra_borg_options else ())
+            + flags.make_repository_flags(repository_path, local_borg_version)
+        )
+
         execute_command(
             full_command,
-            output_file=DO_NOT_CAPTURE,
-            extra_environment=borg_environment,
-            working_directory=working_directory,
-            borg_local_path=local_path,
-            borg_exit_codes=borg_exit_codes,
-        )
-    else:
-        execute_command(
-            full_command,
-            extra_environment=borg_environment,
+            # The Borg repair option triggers an interactive prompt, which won't work when output is
+            # captured. And progress messes with the terminal directly.
+            output_file=(
+                DO_NOT_CAPTURE if check_arguments.repair or config.get('progress') else None
+            ),
+            environment=environment.make_environment(config),
             working_directory=working_directory,
             borg_local_path=local_path,
             borg_exit_codes=borg_exit_codes,

borgmatic/borg/compact.py

@@ -15,9 +15,7 @@ def compact_segments(
     global_arguments,
     local_path='borg',
     remote_path=None,
-    progress=False,
     cleanup_commits=False,
-    threshold=None,
 ):
     '''
     Given dry-run flag, a local or remote repository path, a configuration dict, and the local Borg
@@ -26,14 +24,15 @@ def compact_segments(
     umask = config.get('umask', None)
     lock_wait = config.get('lock_wait', None)
     extra_borg_options = config.get('extra_borg_options', {}).get('compact', '')
+    threshold = config.get('compact_threshold')
 
     full_command = (
         (local_path, 'compact')
         + (('--remote-path', remote_path) if remote_path else ())
         + (('--umask', str(umask)) if umask else ())
-        + (('--log-json',) if global_arguments.log_json else ())
+        + (('--log-json',) if config.get('log_json') else ())
         + (('--lock-wait', str(lock_wait)) if lock_wait else ())
-        + (('--progress',) if progress else ())
+        + (('--progress',) if config.get('progress') else ())
         + (('--cleanup-commits',) if cleanup_commits else ())
         + (('--threshold', str(threshold)) if threshold else ())
         + (('--info',) if logger.getEffectiveLevel() == logging.INFO else ())
@@ -43,13 +42,13 @@ def compact_segments(
     )
 
     if dry_run:
-        logging.info(f'{repository_path}: Skipping compact (dry run)')
+        logging.info('Skipping compact (dry run)')
         return
 
     execute_command(
         full_command,
         output_log_level=logging.INFO,
-        extra_environment=environment.make_environment(config),
+        environment=environment.make_environment(config),
         working_directory=borgmatic.config.paths.get_working_directory(config),
         borg_local_path=local_path,
         borg_exit_codes=config.get('borg_exit_codes'),

borgmatic/borg/create.py

@@ -1,9 +1,7 @@
-import itertools
 import logging
 import os
 import pathlib
 import stat
-import tempfile
 import textwrap
 
 import borgmatic.borg.pattern
@@ -20,76 +18,6 @@ from borgmatic.execute import (
 logger = logging.getLogger(__name__)
 
 
-def write_patterns_file(patterns, borgmatic_runtime_directory, log_prefix, patterns_file=None):
-    '''
-    Given a sequence of patterns as borgmatic.borg.pattern.Pattern instances, write them to a named
-    temporary file in the given borgmatic runtime directory and return the file object so it can
-    continue to exist on disk as long as the caller needs it.
-
-    Use the given log prefix in any logging.
-
-    If an optional open pattern file is given, append to it instead of making a new temporary file.
-    Return None if no patterns are provided.
-    '''
-    if not patterns:
-        return None
-
-    if patterns_file is None:
-        patterns_file = tempfile.NamedTemporaryFile('w', dir=borgmatic_runtime_directory)
-    else:
-        patterns_file.write('\n')
-
-    patterns_output = '\n'.join(
-        f'{pattern.type.value} {pattern.style.value}{":" if pattern.style.value else ""}{pattern.path}'
-        for pattern in patterns
-    )
-    logger.debug(f'{log_prefix}: Writing patterns to {patterns_file.name}:\n{patterns_output}')
-
-    patterns_file.write(patterns_output)
-    patterns_file.flush()
-
-    return patterns_file
-
-
-def make_exclude_flags(config):
-    '''
-    Given a configuration dict with various exclude options, return the corresponding Borg flags as
-    a tuple.
-    '''
-    caches_flag = ('--exclude-caches',) if config.get('exclude_caches') else ()
-    if_present_flags = tuple(
-        itertools.chain.from_iterable(
-            ('--exclude-if-present', if_present)
-            for if_present in config.get('exclude_if_present', ())
-        )
-    )
-    keep_exclude_tags_flags = ('--keep-exclude-tags',) if config.get('keep_exclude_tags') else ()
-    exclude_nodump_flags = ('--exclude-nodump',) if config.get('exclude_nodump') else ()
-
-    return caches_flag + if_present_flags + keep_exclude_tags_flags + exclude_nodump_flags
-
-
-def make_list_filter_flags(local_borg_version, dry_run):
-    '''
-    Given the local Borg version and whether this is a dry run, return the corresponding flags for
-    passing to "--list --filter". The general idea is that excludes are shown for a dry run or when
-    the verbosity is debug.
-    '''
-    base_flags = 'AME'
-    show_excludes = logger.isEnabledFor(logging.DEBUG)
-
-    if feature.available(feature.Feature.EXCLUDED_FILES_MINUS, local_borg_version):
-        if show_excludes or dry_run:
-            return f'{base_flags}+-'
-        else:
-            return base_flags
-
-    if show_excludes:
-        return f'{base_flags}x-'
-    else:
-        return f'{base_flags}-'
-
-
 def special_file(path, working_directory=None):
     '''
     Return whether the given path is a special file (character device, block device, or named pipe
@@ -122,73 +50,66 @@ def collect_special_file_paths(
     config,
     local_path,
     working_directory,
-    borg_environment,
     borgmatic_runtime_directory,
 ):
     '''
     Given a dry-run flag, a Borg create command as a tuple, a configuration dict, a local Borg path,
-    a working directory, a dict of environment variables to pass to Borg, and the borgmatic runtime
-    directory, collect the paths for any special files (character devices, block devices, and named
-    pipes / FIFOs) that Borg would encounter during a create. These are all paths that could cause
-    Borg to hang if its --read-special flag is used.
+    a working directory, and the borgmatic runtime directory, collect the paths for any special
+    files (character devices, block devices, and named pipes / FIFOs) that Borg would encounter
+    during a create. These are all paths that could cause Borg to hang if its --read-special flag is
+    used.
 
     Skip looking for special files in the given borgmatic runtime directory, as borgmatic creates
-    its own special files there for database dumps. And if the borgmatic runtime directory is
-    configured to be excluded from the files Borg backs up, error, because this means Borg won't be
-    able to consume any database dumps and therefore borgmatic will hang.
+    its own special files there for database dumps and we don't want those omitted.
+
+    Additionally, if the borgmatic runtime directory is not contained somewhere in the files Borg
+    plans to backup, that means the user must have excluded the runtime directory (e.g. via
+    "exclude_patterns" or similar). Therefore, raise, because this means Borg won't be able to
+    consume any database dumps and therefore borgmatic will hang when it tries to do so.
     '''
     # Omit "--exclude-nodump" from the Borg dry run command, because that flag causes Borg to open
-    # files including any named pipe we've created.
+    # files including any named pipe we've created. And omit "--filter" because that can break the
+    # paths output parsing below such that path lines no longer start with the expected "- ".
     paths_output = execute_command_and_capture_output(
-        tuple(argument for argument in create_command if argument != '--exclude-nodump')
+        flags.omit_flag_and_value(flags.omit_flag(create_command, '--exclude-nodump'), '--filter')
         + ('--dry-run', '--list'),
         capture_stderr=True,
         working_directory=working_directory,
-        extra_environment=borg_environment,
+        environment=environment.make_environment(config),
         borg_local_path=local_path,
         borg_exit_codes=config.get('borg_exit_codes'),
     )
 
+    # These are all the individual files that Borg is planning to backup as determined by the Borg
+    # create dry run above.
     paths = tuple(
         path_line.split(' ', 1)[1]
         for path_line in paths_output.split('\n')
         if path_line and path_line.startswith('- ') or path_line.startswith('+ ')
     )
-    skip_paths = {}
+
+    # These are the subset of those files that contain the borgmatic runtime directory.
+    paths_containing_runtime_directory = {}
 
     if os.path.exists(borgmatic_runtime_directory):
-        skip_paths = {
+        paths_containing_runtime_directory = {
             path for path in paths if any_parent_directories(path, (borgmatic_runtime_directory,))
         }
 
-        if not skip_paths and not dry_run:
+        # If no paths to backup contain the runtime directory, it must've been excluded.
+        if not paths_containing_runtime_directory and not dry_run:
             raise ValueError(
                 f'The runtime directory {os.path.normpath(borgmatic_runtime_directory)} overlaps with the configured excludes or patterns with excludes. Please ensure the runtime directory is not excluded.'
             )
 
     return tuple(
-        path for path in paths if special_file(path, working_directory) if path not in skip_paths
+        path
+        for path in paths
+        if special_file(path, working_directory)
+        if path not in paths_containing_runtime_directory
     )
 
 
-def check_all_root_patterns_exist(patterns):
-    '''
-    Given a sequence of borgmatic.borg.pattern.Pattern instances, check that all root pattern
-    paths exist. If any don't, raise an exception.
-    '''
-    missing_paths = [
-        pattern.path
-        for pattern in patterns
-        if pattern.type == borgmatic.borg.pattern.Pattern_type.ROOT
-        if not os.path.exists(pattern.path)
-    ]
-
-    if missing_paths:
-        raise ValueError(
-            f"Source directories / root pattern paths do not exist: {', '.join(missing_paths)}"
-        )
-
-
 MAX_SPECIAL_FILE_PATHS_LENGTH = 1000
 
 
@@ -202,9 +123,7 @@ def make_base_create_command(
     borgmatic_runtime_directory,
     local_path='borg',
     remote_path=None,
-    progress=False,
     json=False,
-    list_files=False,
     stream_processes=None,
 ):
     '''
@@ -215,10 +134,10 @@ def make_base_create_command(
     arguments, open pattern file handle).
     '''
     if config.get('source_directories_must_exist', False):
-        check_all_root_patterns_exist(patterns)
+        borgmatic.borg.pattern.check_all_root_patterns_exist(patterns)
 
-    patterns_file = write_patterns_file(
-        patterns, borgmatic_runtime_directory, log_prefix=repository_path
+    patterns_file = borgmatic.borg.pattern.write_patterns_file(
+        patterns, borgmatic_runtime_directory
     )
     checkpoint_interval = config.get('checkpoint_interval', None)
     checkpoint_volume = config.get('checkpoint_volume', None)
@@ -228,7 +147,7 @@ def make_base_create_command(
     upload_buffer_size = config.get('upload_buffer_size', None)
     umask = config.get('umask', None)
     lock_wait = config.get('lock_wait', None)
-    list_filter_flags = make_list_filter_flags(local_borg_version, dry_run)
+    list_filter_flags = flags.make_list_filter_flags(local_borg_version, dry_run)
     files_cache = config.get('files_cache')
     archive_name_format = config.get(
         'archive_name_format', flags.get_default_archive_name_format(local_borg_version)
@@ -263,7 +182,7 @@ def make_base_create_command(
         tuple(local_path.split(' '))
         + ('create',)
         + (('--patterns-from', patterns_file.name) if patterns_file else ())
-        + make_exclude_flags(config)
+        + flags.make_exclude_flags(config)
         + (('--checkpoint-interval', str(checkpoint_interval)) if checkpoint_interval else ())
         + (('--checkpoint-volume', str(checkpoint_volume)) if checkpoint_volume else ())
         + (('--chunker-params', chunker_params) if chunker_params else ())
@@ -280,11 +199,11 @@ def make_base_create_command(
         + (('--files-cache', files_cache) if files_cache else ())
         + (('--remote-path', remote_path) if remote_path else ())
         + (('--umask', str(umask)) if umask else ())
-        + (('--log-json',) if global_arguments.log_json else ())
+        + (('--log-json',) if config.get('log_json') else ())
         + (('--lock-wait', str(lock_wait)) if lock_wait else ())
         + (
             ('--list', '--filter', list_filter_flags)
-            if list_files and not json and not progress
+            if config.get('list_details') and not json and not config.get('progress')
             else ()
         )
         + (('--dry-run',) if dry_run else ())
@@ -299,19 +218,17 @@ def make_base_create_command(
     # cause Borg to hang. But skip this if the user has explicitly set the "read_special" to True.
     if stream_processes and not config.get('read_special'):
         logger.warning(
-            f'{repository_path}: Ignoring configured "read_special" value of false, as true is needed for database hooks.'
+            'Ignoring configured "read_special" value of false, as true is needed for database hooks.'
         )
-        borg_environment = environment.make_environment(config)
         working_directory = borgmatic.config.paths.get_working_directory(config)
 
-        logger.debug(f'{repository_path}: Collecting special file paths')
+        logger.debug('Collecting special file paths')
         special_file_paths = collect_special_file_paths(
             dry_run,
             create_flags + create_positional_arguments,
             config,
             local_path,
             working_directory,
-            borg_environment,
             borgmatic_runtime_directory=borgmatic_runtime_directory,
         )
 
@@ -322,19 +239,19 @@ def make_base_create_command(
                 placeholder=' ...',
             )
             logger.warning(
-                f'{repository_path}: Excluding special files to prevent Borg from hanging: {truncated_special_file_paths}'
+                f'Excluding special files to prevent Borg from hanging: {truncated_special_file_paths}'
             )
-            patterns_file = write_patterns_file(
+            patterns_file = borgmatic.borg.pattern.write_patterns_file(
                 tuple(
                     borgmatic.borg.pattern.Pattern(
                         special_file_path,
-                        borgmatic.borg.pattern.Pattern_type.EXCLUDE,
+                        borgmatic.borg.pattern.Pattern_type.NO_RECURSE,
                         borgmatic.borg.pattern.Pattern_style.FNMATCH,
+                        source=borgmatic.borg.pattern.Pattern_source.INTERNAL,
                     )
                     for special_file_path in special_file_paths
                 ),
                 borgmatic_runtime_directory,
-                log_prefix=repository_path,
                 patterns_file=patterns_file,
             )
 
@@ -354,10 +271,7 @@ def create_archive(
     borgmatic_runtime_directory,
     local_path='borg',
     remote_path=None,
-    progress=False,
-    stats=False,
     json=False,
-    list_files=False,
     stream_processes=None,
 ):
     '''
@@ -382,30 +296,26 @@ def create_archive(
         borgmatic_runtime_directory,
         local_path,
         remote_path,
-        progress,
         json,
-        list_files,
         stream_processes,
     )
 
     if json:
         output_log_level = None
-    elif list_files or (stats and not dry_run):
+    elif config.get('list_details') or (config.get('statistics') and not dry_run):
         output_log_level = logging.ANSWER
     else:
         output_log_level = logging.INFO
 
     # The progress output isn't compatible with captured and logged output, as progress messes with
     # the terminal directly.
-    output_file = DO_NOT_CAPTURE if progress else None
-
-    borg_environment = environment.make_environment(config)
+    output_file = DO_NOT_CAPTURE if config.get('progress') else None
 
     create_flags += (
         (('--info',) if logger.getEffectiveLevel() == logging.INFO and not json else ())
-        + (('--stats',) if stats and not json and not dry_run else ())
+        + (('--stats',) if config.get('statistics') and not json and not dry_run else ())
         + (('--debug', '--show-rc') if logger.isEnabledFor(logging.DEBUG) and not json else ())
-        + (('--progress',) if progress else ())
+        + (('--progress',) if config.get('progress') else ())
         + (('--json',) if json else ())
     )
     borg_exit_codes = config.get('borg_exit_codes')
@@ -417,7 +327,7 @@ def create_archive(
             output_log_level,
             output_file,
             working_directory=working_directory,
-            extra_environment=borg_environment,
+            environment=environment.make_environment(config),
             borg_local_path=local_path,
             borg_exit_codes=borg_exit_codes,
         )
@@ -425,7 +335,7 @@ def create_archive(
         return execute_command_and_capture_output(
             create_flags + create_positional_arguments,
             working_directory=working_directory,
-            extra_environment=borg_environment,
+            environment=environment.make_environment(config),
             borg_local_path=local_path,
             borg_exit_codes=borg_exit_codes,
         )
@@ -435,7 +345,7 @@ def create_archive(
             output_log_level,
             output_file,
             working_directory=working_directory,
-            extra_environment=borg_environment,
+            environment=environment.make_environment(config),
             borg_local_path=local_path,
             borg_exit_codes=borg_exit_codes,
         )

borgmatic/borg/delete.py

@@ -32,9 +32,9 @@ def make_delete_command(
         + borgmatic.borg.flags.make_flags('dry-run', global_arguments.dry_run)
         + borgmatic.borg.flags.make_flags('remote-path', remote_path)
         + borgmatic.borg.flags.make_flags('umask', config.get('umask'))
-        + borgmatic.borg.flags.make_flags('log-json', global_arguments.log_json)
+        + borgmatic.borg.flags.make_flags('log-json', config.get('log_json'))
         + borgmatic.borg.flags.make_flags('lock-wait', config.get('lock_wait'))
-        + borgmatic.borg.flags.make_flags('list', delete_arguments.list_archives)
+        + borgmatic.borg.flags.make_flags('list', config.get('list_details'))
         + (
             (('--force',) + (('--force',) if delete_arguments.force >= 2 else ()))
             if delete_arguments.force
@@ -48,9 +48,17 @@ def make_delete_command(
             local_borg_version=local_borg_version,
             default_archive_name_format='*',
         )
+        + (('--stats',) if config.get('statistics') else ())
         + borgmatic.borg.flags.make_flags_from_arguments(
             delete_arguments,
-            excludes=('list_archives', 'force', 'match_archives', 'archive', 'repository'),
+            excludes=(
+                'list_details',
+                'statistics',
+                'force',
+                'match_archives',
+                'archive',
+                'repository',
+            ),
         )
         + borgmatic.borg.flags.make_repository_flags(repository['path'], local_borg_version)
     )
@@ -98,7 +106,7 @@ def delete_archives(
 
         repo_delete_arguments = argparse.Namespace(
             repository=repository['path'],
-            list_archives=delete_arguments.list_archives,
+            list_details=delete_arguments.list_details,
             force=delete_arguments.force,
             cache_only=delete_arguments.cache_only,
             keep_security_info=delete_arguments.keep_security_info,
@@ -128,7 +136,7 @@ def delete_archives(
     borgmatic.execute.execute_command(
         command,
         output_log_level=logging.ANSWER,
-        extra_environment=borgmatic.borg.environment.make_environment(config),
+        environment=borgmatic.borg.environment.make_environment(config),
         working_directory=borgmatic.config.paths.get_working_directory(config),
         borg_local_path=local_path,
         borg_exit_codes=config.get('borg_exit_codes'),

borgmatic/borg/environment.py

@@ -1,5 +1,8 @@
 import os
 
+import borgmatic.borg.passcommand
+import borgmatic.hooks.credential.parse
+
 OPTION_TO_ENVIRONMENT_VARIABLE = {
     'borg_base_directory': 'BORG_BASE_DIR',
     'borg_config_directory': 'BORG_CONFIG_DIR',
@@ -7,8 +10,6 @@ OPTION_TO_ENVIRONMENT_VARIABLE = {
     'borg_files_cache_ttl': 'BORG_FILES_CACHE_TTL',
     'borg_security_directory': 'BORG_SECURITY_DIR',
     'borg_keys_directory': 'BORG_KEYS_DIR',
-    'encryption_passcommand': 'BORG_PASSCOMMAND',
-    'encryption_passphrase': 'BORG_PASSPHRASE',
     'ssh_command': 'BORG_RSH',
     'temporary_directory': 'TMPDIR',
 }
@@ -25,17 +26,59 @@ DEFAULT_BOOL_OPTION_TO_UPPERCASE_ENVIRONMENT_VARIABLE = {
 
 def make_environment(config):
     '''
-    Given a borgmatic configuration dict, return its options converted to a Borg environment
-    variable dict.
+    Given a borgmatic configuration dict, convert it to a Borg environment variable dict, merge it
+    with a copy of the current environment variables, and return the result.
+
+    Do not reuse this environment across multiple Borg invocations, because it can include
+    references to resources like anonymous pipes for passphrases—which can only be consumed once.
+
+    Here's how native Borg precedence works for a few of the environment variables:
+
+      1. BORG_PASSPHRASE, if set, is used first.
+      2. BORG_PASSCOMMAND is used only if BORG_PASSPHRASE isn't set.
+      3. BORG_PASSPHRASE_FD is used only if neither of the above are set.
+
+    In borgmatic, we want to simulate this precedence order, but there are some additional
+    complications. First, values can come from either configuration or from environment variables
+    set outside borgmatic; configured options should take precedence. Second, when borgmatic gets a
+    passphrase—directly from configuration or indirectly via a credential hook or a passcommand—we
+    want to pass that passphrase to Borg via an anonymous pipe (+ BORG_PASSPHRASE_FD), since that's
+    more secure than using an environment variable (BORG_PASSPHRASE).
     '''
-    environment = {}
+    environment = dict(os.environ)
 
     for option_name, environment_variable_name in OPTION_TO_ENVIRONMENT_VARIABLE.items():
         value = config.get(option_name)
 
-        if value:
+        if value is not None:
             environment[environment_variable_name] = str(value)
 
+    if 'encryption_passphrase' in config:
+        environment.pop('BORG_PASSPHRASE', None)
+        environment.pop('BORG_PASSCOMMAND', None)
+
+    if 'encryption_passcommand' in config:
+        environment.pop('BORG_PASSCOMMAND', None)
+
+    passphrase = borgmatic.hooks.credential.parse.resolve_credential(
+        config.get('encryption_passphrase'), config
+    )
+
+    if passphrase is None:
+        passphrase = borgmatic.borg.passcommand.get_passphrase_from_passcommand(config)
+
+    # If there's a passphrase (from configuration, from a configured credential, or from a
+    # configured passcommand), send it to Borg via an anonymous pipe.
+    if passphrase is not None:
+        read_file_descriptor, write_file_descriptor = os.pipe()
+        os.write(write_file_descriptor, passphrase.encode('utf-8'))
+        os.close(write_file_descriptor)
+
+        # This plus subprocess.Popen(..., close_fds=False) in execute.py is necessary for the Borg
+        # child process to inherit the file descriptor.
+        os.set_inheritable(read_file_descriptor, True)
+        environment['BORG_PASSPHRASE_FD'] = str(read_file_descriptor)
+
     for (
         option_name,
         environment_variable_name,

borgmatic/borg/export_key.py

@@ -46,7 +46,7 @@ def export_key(
         (local_path, 'key', 'export')
         + (('--remote-path', remote_path) if remote_path else ())
         + (('--umask', str(umask)) if umask else ())
-        + (('--log-json',) if global_arguments.log_json else ())
+        + (('--log-json',) if config.get('log_json') else ())
         + (('--lock-wait', str(lock_wait)) if lock_wait else ())
         + (('--info',) if logger.getEffectiveLevel() == logging.INFO else ())
         + (('--debug', '--show-rc') if logger.isEnabledFor(logging.DEBUG) else ())
@@ -60,14 +60,14 @@ def export_key(
     )
 
     if global_arguments.dry_run:
-        logger.info(f'{repository_path}: Skipping key export (dry run)')
+        logger.info('Skipping key export (dry run)')
         return
 
     execute_command(
         full_command,
         output_file=output_file,
         output_log_level=logging.ANSWER,
-        extra_environment=environment.make_environment(config),
+        environment=environment.make_environment(config),
         working_directory=working_directory,
         borg_local_path=local_path,
         borg_exit_codes=config.get('borg_exit_codes'),

borgmatic/borg/export_tar.py

@@ -20,7 +20,6 @@ def export_tar_archive(
     local_path='borg',
     remote_path=None,
     tar_filter=None,
-    list_files=False,
     strip_components=None,
 ):
     '''
@@ -40,10 +39,10 @@ def export_tar_archive(
         (local_path, 'export-tar')
         + (('--remote-path', remote_path) if remote_path else ())
         + (('--umask', str(umask)) if umask else ())
-        + (('--log-json',) if global_arguments.log_json else ())
+        + (('--log-json',) if config.get('log_json') else ())
         + (('--lock-wait', str(lock_wait)) if lock_wait else ())
         + (('--info',) if logger.getEffectiveLevel() == logging.INFO else ())
-        + (('--list',) if list_files else ())
+        + (('--list',) if config.get('list_details') else ())
         + (('--debug', '--show-rc') if logger.isEnabledFor(logging.DEBUG) else ())
         + (('--dry-run',) if dry_run else ())
         + (('--tar-filter', tar_filter) if tar_filter else ())
@@ -57,20 +56,20 @@ def export_tar_archive(
         + (tuple(paths) if paths else ())
     )
 
-    if list_files:
+    if config.get('list_details'):
         output_log_level = logging.ANSWER
     else:
         output_log_level = logging.INFO
 
     if dry_run:
-        logging.info(f'{repository_path}: Skipping export to tar file (dry run)')
+        logging.info('Skipping export to tar file (dry run)')
         return
 
     execute_command(
         full_command,
         output_file=DO_NOT_CAPTURE if destination_path == '-' else None,
         output_log_level=output_log_level,
-        extra_environment=environment.make_environment(config),
+        environment=environment.make_environment(config),
         working_directory=borgmatic.config.paths.get_working_directory(config),
         borg_local_path=local_path,
         borg_exit_codes=config.get('borg_exit_codes'),

borgmatic/borg/extract.py

@@ -44,11 +44,10 @@ def extract_last_archive_dry_run(
         return
 
     list_flag = ('--list',) if logger.isEnabledFor(logging.DEBUG) else ()
-    borg_environment = environment.make_environment(config)
     full_extract_command = (
         (local_path, 'extract', '--dry-run')
         + (('--remote-path', remote_path) if remote_path else ())
-        + (('--log-json',) if global_arguments.log_json else ())
+        + (('--log-json',) if config.get('log_json') else ())
         + (('--lock-wait', str(lock_wait)) if lock_wait else ())
         + verbosity_flags
         + list_flag
@@ -59,7 +58,7 @@ def extract_last_archive_dry_run(
 
     execute_command(
         full_extract_command,
-        extra_environment=borg_environment,
+        environment=environment.make_environment(config),
         working_directory=borgmatic.config.paths.get_working_directory(config),
         borg_local_path=local_path,
         borg_exit_codes=config.get('borg_exit_codes'),
@@ -78,7 +77,6 @@ def extract_archive(
     remote_path=None,
     destination_path=None,
     strip_components=None,
-    progress=False,
     extract_to_stdout=False,
 ):
     '''
@@ -93,8 +91,8 @@ def extract_archive(
     umask = config.get('umask', None)
     lock_wait = config.get('lock_wait', None)
 
-    if progress and extract_to_stdout:
-        raise ValueError('progress and extract_to_stdout cannot both be set')
+    if config.get('progress') and extract_to_stdout:
+        raise ValueError('progress and extract to stdout cannot both be set')
 
     if feature.available(feature.Feature.NUMERIC_IDS, local_borg_version):
         numeric_ids_flags = ('--numeric-ids',) if config.get('numeric_ids') else ()
@@ -123,28 +121,25 @@ def extract_archive(
         + (('--remote-path', remote_path) if remote_path else ())
         + numeric_ids_flags
         + (('--umask', str(umask)) if umask else ())
-        + (('--log-json',) if global_arguments.log_json else ())
+        + (('--log-json',) if config.get('log_json') else ())
         + (('--lock-wait', str(lock_wait)) if lock_wait else ())
         + (('--info',) if logger.getEffectiveLevel() == logging.INFO else ())
         + (('--debug', '--list', '--show-rc') if logger.isEnabledFor(logging.DEBUG) else ())
         + (('--dry-run',) if dry_run else ())
         + (('--strip-components', str(strip_components)) if strip_components else ())
-        + (('--progress',) if progress else ())
+        + (('--progress',) if config.get('progress') else ())
         + (('--stdout',) if extract_to_stdout else ())
         + flags.make_repository_archive_flags(
             # Make the repository path absolute so the destination directory used below via changing
             # the working directory doesn't prevent Borg from finding the repo. But also apply the
             # user's configured working directory (if any) to the repo path.
-            borgmatic.config.validate.normalize_repository_path(
-                os.path.join(working_directory or '', repository)
-            ),
+            borgmatic.config.validate.normalize_repository_path(repository, working_directory),
             archive,
             local_borg_version,
         )
         + (tuple(paths) if paths else ())
     )
 
-    borg_environment = environment.make_environment(config)
     borg_exit_codes = config.get('borg_exit_codes')
     full_destination_path = (
         os.path.join(working_directory or '', destination_path) if destination_path else None
@@ -152,11 +147,11 @@ def extract_archive(
 
     # The progress output isn't compatible with captured and logged output, as progress messes with
     # the terminal directly.
-    if progress:
+    if config.get('progress'):
         return execute_command(
             full_command,
             output_file=DO_NOT_CAPTURE,
-            extra_environment=borg_environment,
+            environment=environment.make_environment(config),
             working_directory=full_destination_path,
             borg_local_path=local_path,
             borg_exit_codes=borg_exit_codes,
@@ -168,7 +163,7 @@ def extract_archive(
             full_command,
             output_file=subprocess.PIPE,
             run_to_completion=False,
-            extra_environment=borg_environment,
+            environment=environment.make_environment(config),
             working_directory=full_destination_path,
             borg_local_path=local_path,
             borg_exit_codes=borg_exit_codes,
@@ -178,7 +173,7 @@ def extract_archive(
     # if the restore paths don't exist in the archive.
     execute_command(
         full_command,
-        extra_environment=borg_environment,
+        environment=environment.make_environment(config),
         working_directory=full_destination_path,
         borg_local_path=local_path,
         borg_exit_codes=borg_exit_codes,

borgmatic/borg/feature.py

@@ -17,6 +17,7 @@ class Feature(Enum):
     MATCH_ARCHIVES = 11
     EXCLUDED_FILES_MINUS = 12
     ARCHIVE_SERIES = 13
+    NO_PRUNE_STATS = 14
 
 
 FEATURE_TO_MINIMUM_BORG_VERSION = {
@@ -33,6 +34,7 @@ FEATURE_TO_MINIMUM_BORG_VERSION = {
     Feature.MATCH_ARCHIVES: parse('2.0.0b3'),  # borg --match-archives
     Feature.EXCLUDED_FILES_MINUS: parse('2.0.0b5'),  # --list --filter uses "-" for excludes
     Feature.ARCHIVE_SERIES: parse('2.0.0b11'),  # identically named archives form a series
+    Feature.NO_PRUNE_STATS: parse('2.0.0b10'),  # prune --stats is not available
 }
 
 

borgmatic/borg/flags.py

@@ -156,3 +156,83 @@ def warn_for_aggressive_archive_flags(json_command, json_output):
         logger.debug(f'Cannot parse JSON output from archive command: {error}')
     except (TypeError, KeyError):
         logger.debug('Cannot parse JSON output from archive command: No "archives" key found')
+
+
+def omit_flag(arguments, flag):
+    '''
+    Given a sequence of Borg command-line arguments, return them with the given (valueless) flag
+    omitted. For instance, if the flag is "--flag" and arguments is:
+
+        ('borg', 'create', '--flag', '--other-flag')
+
+    ... then return:
+
+        ('borg', 'create', '--other-flag')
+    '''
+    return tuple(argument for argument in arguments if argument != flag)
+
+
+def omit_flag_and_value(arguments, flag):
+    '''
+    Given a sequence of Borg command-line arguments, return them with the given flag and its
+    corresponding value omitted. For instance, if the flag is "--flag" and arguments is:
+
+        ('borg', 'create', '--flag', 'value', '--other-flag')
+
+    ... or:
+
+        ('borg', 'create', '--flag=value', '--other-flag')
+
+    ... then return:
+
+        ('borg', 'create', '--other-flag')
+    '''
+    # This works by zipping together a list of overlapping pairwise arguments. E.g., ('one', 'two',
+    # 'three', 'four') becomes ((None, 'one'), ('one, 'two'), ('two', 'three'), ('three', 'four')).
+    # This makes it easy to "look back" at the previous arguments so we can exclude both a flag and
+    # its value.
+    return tuple(
+        argument
+        for (previous_argument, argument) in zip((None,) + arguments, arguments)
+        if flag not in (previous_argument, argument)
+        if not argument.startswith(f'{flag}=')
+    )
+
+
+def make_exclude_flags(config):
+    '''
+    Given a configuration dict with various exclude options, return the corresponding Borg flags as
+    a tuple.
+    '''
+    caches_flag = ('--exclude-caches',) if config.get('exclude_caches') else ()
+    if_present_flags = tuple(
+        itertools.chain.from_iterable(
+            ('--exclude-if-present', if_present)
+            for if_present in config.get('exclude_if_present', ())
+        )
+    )
+    keep_exclude_tags_flags = ('--keep-exclude-tags',) if config.get('keep_exclude_tags') else ()
+    exclude_nodump_flags = ('--exclude-nodump',) if config.get('exclude_nodump') else ()
+
+    return caches_flag + if_present_flags + keep_exclude_tags_flags + exclude_nodump_flags
+
+
+def make_list_filter_flags(local_borg_version, dry_run):
+    '''
+    Given the local Borg version and whether this is a dry run, return the corresponding flags for
+    passing to "--list --filter". The general idea is that excludes are shown for a dry run or when
+    the verbosity is debug.
+    '''
+    base_flags = 'AME'
+    show_excludes = logger.isEnabledFor(logging.DEBUG)
+
+    if feature.available(feature.Feature.EXCLUDED_FILES_MINUS, local_borg_version):
+        if show_excludes or dry_run:
+            return f'{base_flags}+-'
+        else:
+            return base_flags
+
+    if show_excludes:
+        return f'{base_flags}x-'
+    else:
+        return f'{base_flags}-'

borgmatic/borg/import_key.py

@@ -0,0 +1,70 @@
+import logging
+import os
+
+import borgmatic.config.paths
+import borgmatic.logger
+from borgmatic.borg import environment, flags
+from borgmatic.execute import DO_NOT_CAPTURE, execute_command
+
+logger = logging.getLogger(__name__)
+
+
+def import_key(
+    repository_path,
+    config,
+    local_borg_version,
+    import_arguments,
+    global_arguments,
+    local_path='borg',
+    remote_path=None,
+):
+    '''
+    Given a local or remote repository path, a configuration dict, the local Borg version, import
+    arguments, and optional local and remote Borg paths, import the repository key from the
+    path indicated in the import arguments.
+
+    If the path is empty or "-", then read the key from stdin.
+
+    Raise ValueError if the path is given and it does not exist.
+    '''
+    umask = config.get('umask', None)
+    lock_wait = config.get('lock_wait', None)
+    working_directory = borgmatic.config.paths.get_working_directory(config)
+
+    if import_arguments.path and import_arguments.path != '-':
+        if not os.path.exists(os.path.join(working_directory or '', import_arguments.path)):
+            raise ValueError(f'Path {import_arguments.path} does not exist. Aborting.')
+
+        input_file = None
+    else:
+        input_file = DO_NOT_CAPTURE
+
+    full_command = (
+        (local_path, 'key', 'import')
+        + (('--remote-path', remote_path) if remote_path else ())
+        + (('--umask', str(umask)) if umask else ())
+        + (('--log-json',) if config.get('log_json') else ())
+        + (('--lock-wait', str(lock_wait)) if lock_wait else ())
+        + (('--info',) if logger.getEffectiveLevel() == logging.INFO else ())
+        + (('--debug', '--show-rc') if logger.isEnabledFor(logging.DEBUG) else ())
+        + flags.make_flags('paper', import_arguments.paper)
+        + flags.make_repository_flags(
+            repository_path,
+            local_borg_version,
+        )
+        + ((import_arguments.path,) if input_file is None else ())
+    )
+
+    if global_arguments.dry_run:
+        logger.info('Skipping key import (dry run)')
+        return
+
+    execute_command(
+        full_command,
+        input_file=input_file,
+        output_log_level=logging.INFO,
+        environment=environment.make_environment(config),
+        working_directory=working_directory,
+        borg_local_path=local_path,
+        borg_exit_codes=config.get('borg_exit_codes'),
+    )

borgmatic/borg/info.py

@@ -37,7 +37,7 @@ def make_info_command(
         )
         + flags.make_flags('remote-path', remote_path)
         + flags.make_flags('umask', config.get('umask'))
-        + flags.make_flags('log-json', global_arguments.log_json)
+        + flags.make_flags('log-json', config.get('log_json'))
         + flags.make_flags('lock-wait', config.get('lock_wait'))
         + (
             (
@@ -48,9 +48,7 @@ def make_info_command(
             if info_arguments.prefix
             else (
                 flags.make_match_archives_flags(
-                    info_arguments.match_archives
-                    or info_arguments.archive
-                    or config.get('match_archives'),
+                    info_arguments.archive or config.get('match_archives'),
                     config.get('archive_name_format'),
                     local_borg_version,
                 )
@@ -102,7 +100,7 @@ def display_archives_info(
 
     json_info = execute_command_and_capture_output(
         json_command,
-        extra_environment=environment.make_environment(config),
+        environment=environment.make_environment(config),
         working_directory=working_directory,
         borg_local_path=local_path,
         borg_exit_codes=borg_exit_codes,
@@ -116,7 +114,7 @@ def display_archives_info(
     execute_command(
         main_command,
         output_log_level=logging.ANSWER,
-        extra_environment=environment.make_environment(config),
+        environment=environment.make_environment(config),
         working_directory=working_directory,
         borg_local_path=local_path,
         borg_exit_codes=borg_exit_codes,

borgmatic/borg/list.py

@@ -48,7 +48,7 @@ def make_list_command(
         )
         + flags.make_flags('remote-path', remote_path)
         + flags.make_flags('umask', config.get('umask'))
-        + flags.make_flags('log-json', global_arguments.log_json)
+        + flags.make_flags('log-json', config.get('log_json'))
         + flags.make_flags('lock-wait', config.get('lock_wait'))
         + flags.make_flags_from_arguments(list_arguments, excludes=MAKE_FLAGS_EXCLUDES)
         + (
@@ -106,8 +106,6 @@ def capture_archive_listing(
     format to use for the output, and local and remote Borg paths, capture the
     output of listing that archive and return it as a list of file paths.
     '''
-    borg_environment = environment.make_environment(config)
-
     return tuple(
         execute_command_and_capture_output(
             make_list_command(
@@ -126,12 +124,12 @@ def capture_archive_listing(
                 local_path,
                 remote_path,
             ),
-            extra_environment=borg_environment,
+            environment=environment.make_environment(config),
             working_directory=borgmatic.config.paths.get_working_directory(config),
             borg_local_path=local_path,
             borg_exit_codes=config.get('borg_exit_codes'),
         )
-        .strip('\n')
+        .strip('\0')
         .split('\0')
     )
 
@@ -194,7 +192,6 @@ def list_archive(
             'The --json flag on the list action is not supported when using the --archive/--find flags.'
         )
 
-    borg_environment = environment.make_environment(config)
     borg_exit_codes = config.get('borg_exit_codes')
 
     # If there are any paths to find (and there's not a single archive already selected), start by
@@ -224,7 +221,7 @@ def list_archive(
                     local_path,
                     remote_path,
                 ),
-                extra_environment=borg_environment,
+                environment=environment.make_environment(config),
                 working_directory=borgmatic.config.paths.get_working_directory(config),
                 borg_local_path=local_path,
                 borg_exit_codes=borg_exit_codes,
@@ -237,7 +234,7 @@ def list_archive(
 
     # For each archive listed by Borg, run list on the contents of that archive.
     for archive in archive_lines:
-        logger.answer(f'{repository_path}: Listing archive {archive}')
+        logger.answer(f'Listing archive {archive}')
 
         archive_arguments = copy.copy(list_arguments)
         archive_arguments.archive = archive
@@ -260,7 +257,7 @@ def list_archive(
         execute_command(
             main_command,
             output_log_level=logging.ANSWER,
-            extra_environment=borg_environment,
+            environment=environment.make_environment(config),
             working_directory=borgmatic.config.paths.get_working_directory(config),
             borg_local_path=local_path,
             borg_exit_codes=borg_exit_codes,

borgmatic/borg/mount.py

@@ -30,7 +30,7 @@ def mount_archive(
         (local_path, 'mount')
         + (('--remote-path', remote_path) if remote_path else ())
         + (('--umask', str(umask)) if umask else ())
-        + (('--log-json',) if global_arguments.log_json else ())
+        + (('--log-json',) if config.get('log_json') else ())
         + (('--lock-wait', str(lock_wait)) if lock_wait else ())
         + (('--info',) if logger.getEffectiveLevel() == logging.INFO else ())
         + (('--debug', '--show-rc') if logger.isEnabledFor(logging.DEBUG) else ())
@@ -59,7 +59,6 @@ def mount_archive(
         + (tuple(mount_arguments.paths) if mount_arguments.paths else ())
     )
 
-    borg_environment = environment.make_environment(config)
     working_directory = borgmatic.config.paths.get_working_directory(config)
 
     # Don't capture the output when foreground mode is used so that ctrl-C can work properly.
@@ -67,7 +66,7 @@ def mount_archive(
         execute_command(
             full_command,
             output_file=DO_NOT_CAPTURE,
-            extra_environment=borg_environment,
+            environment=environment.make_environment(config),
             working_directory=working_directory,
             borg_local_path=local_path,
             borg_exit_codes=config.get('borg_exit_codes'),
@@ -76,7 +75,7 @@ def mount_archive(
 
     execute_command(
         full_command,
-        extra_environment=borg_environment,
+        environment=environment.make_environment(config),
         working_directory=working_directory,
         borg_local_path=local_path,
         borg_exit_codes=config.get('borg_exit_codes'),

borgmatic/borg/passcommand.py

@@ -0,0 +1,40 @@
+import functools
+import logging
+import shlex
+
+import borgmatic.config.paths
+import borgmatic.execute
+
+logger = logging.getLogger(__name__)
+
+
+@functools.cache
+def run_passcommand(passcommand, working_directory):
+    '''
+    Run the given passcommand using the given working directory and return the passphrase produced
+    by the command.
+
+    Cache the results so that the passcommand only needs to run—and potentially prompt the user—once
+    per borgmatic invocation.
+    '''
+    return borgmatic.execute.execute_command_and_capture_output(
+        shlex.split(passcommand),
+        working_directory=working_directory,
+    )
+
+
+def get_passphrase_from_passcommand(config):
+    '''
+    Given the configuration dict, call the configured passcommand to produce and return an
+    encryption passphrase. In effect, we're doing an end-run around Borg by invoking its passcommand
+    ourselves. This allows us to pass the resulting passphrase to multiple different Borg
+    invocations without the user having to be prompted multiple times.
+
+    If no passcommand is configured, then return None.
+    '''
+    passcommand = config.get('encryption_passcommand')
+
+    if not passcommand:
+        return None
+
+    return run_passcommand(passcommand, borgmatic.config.paths.get_working_directory(config))

borgmatic/borg/pattern.py

@@ -1,5 +1,12 @@
 import collections
 import enum
+import logging
+import os
+import tempfile
+
+import borgmatic.borg.pattern
+
+logger = logging.getLogger(__name__)
 
 
 # See https://borgbackup.readthedocs.io/en/stable/usage/help.html#borg-help-patterns
@@ -20,12 +27,80 @@ class Pattern_style(enum.Enum):
     PATH_FULL_MATCH = 'pf'
 
 
+class Pattern_source(enum.Enum):
+    '''
+    Where the pattern came from within borgmatic. This is important because certain use cases (like
+    filesystem snapshotting) only want to consider patterns that the user actually put in a
+    configuration file and not patterns from other sources.
+    '''
+
+    # The pattern is from a borgmatic configuration option, e.g. listed in "source_directories".
+    CONFIG = 'config'
+
+    # The pattern is generated internally within borgmatic, e.g. for special file excludes.
+    INTERNAL = 'internal'
+
+    # The pattern originates from within a borgmatic hook, e.g. a database hook that adds its dump
+    # directory.
+    HOOK = 'hook'
+
+
 Pattern = collections.namedtuple(
     'Pattern',
-    ('path', 'type', 'style', 'device'),
+    ('path', 'type', 'style', 'device', 'source'),
     defaults=(
         Pattern_type.ROOT,
         Pattern_style.NONE,
         None,
+        Pattern_source.HOOK,
     ),
 )
+
+
+def write_patterns_file(patterns, borgmatic_runtime_directory, patterns_file=None):
+    '''
+    Given a sequence of patterns as borgmatic.borg.pattern.Pattern instances, write them to a named
+    temporary file in the given borgmatic runtime directory and return the file object so it can
+    continue to exist on disk as long as the caller needs it.
+
+    If an optional open pattern file is given, append to it instead of making a new temporary file.
+    Return None if no patterns are provided.
+    '''
+    if not patterns:
+        return None
+
+    if patterns_file is None:
+        patterns_file = tempfile.NamedTemporaryFile('w', dir=borgmatic_runtime_directory)
+        operation_name = 'Writing'
+    else:
+        patterns_file.write('\n')
+        operation_name = 'Appending'
+
+    patterns_output = '\n'.join(
+        f'{pattern.type.value} {pattern.style.value}{":" if pattern.style.value else ""}{pattern.path}'
+        for pattern in patterns
+    )
+    logger.debug(f'{operation_name} patterns to {patterns_file.name}:\n{patterns_output}')
+
+    patterns_file.write(patterns_output)
+    patterns_file.flush()
+
+    return patterns_file
+
+
+def check_all_root_patterns_exist(patterns):
+    '''
+    Given a sequence of borgmatic.borg.pattern.Pattern instances, check that all root pattern
+    paths exist. If any don't, raise an exception.
+    '''
+    missing_paths = [
+        pattern.path
+        for pattern in patterns
+        if pattern.type == borgmatic.borg.pattern.Pattern_type.ROOT
+        if not os.path.exists(pattern.path)
+    ]
+
+    if missing_paths:
+        raise ValueError(
+            f"Source directories or root pattern paths do not exist: {', '.join(missing_paths)}"
+        )

borgmatic/borg/prune.py

@@ -41,7 +41,7 @@ def make_prune_flags(config, prune_arguments, local_borg_version):
         if prefix
         else (
             flags.make_match_archives_flags(
-                prune_arguments.match_archives or config.get('match_archives'),
+                config.get('match_archives'),
                 config.get('archive_name_format'),
                 local_borg_version,
             )
@@ -73,22 +73,28 @@ def prune_archives(
         + make_prune_flags(config, prune_arguments, local_borg_version)
         + (('--remote-path', remote_path) if remote_path else ())
         + (('--umask', str(umask)) if umask else ())
-        + (('--log-json',) if global_arguments.log_json else ())
+        + (('--log-json',) if config.get('log_json') else ())
         + (('--lock-wait', str(lock_wait)) if lock_wait else ())
-        + (('--stats',) if prune_arguments.stats and not dry_run else ())
+        + (
+            ('--stats',)
+            if config.get('statistics')
+            and not dry_run
+            and not feature.available(feature.Feature.NO_PRUNE_STATS, local_borg_version)
+            else ()
+        )
         + (('--info',) if logger.getEffectiveLevel() == logging.INFO else ())
         + flags.make_flags_from_arguments(
             prune_arguments,
-            excludes=('repository', 'match_archives', 'stats', 'list_archives'),
+            excludes=('repository', 'match_archives', 'statistics', 'list_details'),
         )
-        + (('--list',) if prune_arguments.list_archives else ())
+        + (('--list',) if config.get('list_details') else ())
         + (('--debug', '--show-rc') if logger.isEnabledFor(logging.DEBUG) else ())
         + (('--dry-run',) if dry_run else ())
         + (tuple(extra_borg_options.split(' ')) if extra_borg_options else ())
         + flags.make_repository_flags(repository_path, local_borg_version)
     )
 
-    if prune_arguments.stats or prune_arguments.list_archives:
+    if config.get('statistics') or config.get('list_details'):
         output_log_level = logging.ANSWER
     else:
         output_log_level = logging.INFO
@@ -96,7 +102,7 @@ def prune_archives(
     execute_command(
         full_command,
         output_log_level=output_log_level,
-        extra_environment=environment.make_environment(config),
+        environment=environment.make_environment(config),
         working_directory=borgmatic.config.paths.get_working_directory(config),
         borg_local_path=local_path,
         borg_exit_codes=config.get('borg_exit_codes'),

borgmatic/borg/recreate.py

@@ -0,0 +1,104 @@
+import logging
+import shlex
+
+import borgmatic.borg.environment
+import borgmatic.borg.feature
+import borgmatic.config.paths
+import borgmatic.execute
+from borgmatic.borg import flags
+from borgmatic.borg.pattern import write_patterns_file
+
+logger = logging.getLogger(__name__)
+
+
+def recreate_archive(
+    repository,
+    archive,
+    config,
+    local_borg_version,
+    recreate_arguments,
+    global_arguments,
+    local_path,
+    remote_path=None,
+    patterns=None,
+):
+    '''
+    Given a local or remote repository path, an archive name, a configuration dict, the local Borg
+    version string, an argparse.Namespace of recreate arguments, an argparse.Namespace of global
+    arguments, optional local and remote Borg paths, executes the recreate command with the given
+    arguments.
+    '''
+    lock_wait = config.get('lock_wait', None)
+    exclude_flags = flags.make_exclude_flags(config)
+    compression = config.get('compression', None)
+    chunker_params = config.get('chunker_params', None)
+
+    # Available recompress MODES: "if-different", "always", "never" (default)
+    recompress = config.get('recompress', None)
+
+    # Write patterns to a temporary file and use that file with --patterns-from.
+    patterns_file = write_patterns_file(
+        patterns, borgmatic.config.paths.get_working_directory(config)
+    )
+
+    recreate_command = (
+        (local_path, 'recreate')
+        + (('--remote-path', remote_path) if remote_path else ())
+        + (('--log-json',) if config.get('log_json') else ())
+        + (('--lock-wait', str(lock_wait)) if lock_wait is not None else ())
+        + (('--info',) if logger.getEffectiveLevel() == logging.INFO else ())
+        + (('--debug', '--show-rc') if logger.isEnabledFor(logging.DEBUG) else ())
+        + (('--patterns-from', patterns_file.name) if patterns_file else ())
+        + (
+            (
+                '--list',
+                '--filter',
+                flags.make_list_filter_flags(local_borg_version, global_arguments.dry_run),
+            )
+            if config.get('list_details')
+            else ()
+        )
+        # Flag --target works only for a single archive.
+        + (('--target', recreate_arguments.target) if recreate_arguments.target and archive else ())
+        + (
+            ('--comment', shlex.quote(recreate_arguments.comment))
+            if recreate_arguments.comment
+            else ()
+        )
+        + (('--timestamp', recreate_arguments.timestamp) if recreate_arguments.timestamp else ())
+        + (('--compression', compression) if compression else ())
+        + (('--chunker-params', chunker_params) if chunker_params else ())
+        + (('--recompress', recompress) if recompress else ())
+        + exclude_flags
+        + (
+            (
+                flags.make_repository_flags(repository, local_borg_version)
+                + flags.make_match_archives_flags(
+                    archive or config.get('match_archives'),
+                    config.get('archive_name_format'),
+                    local_borg_version,
+                )
+            )
+            if borgmatic.borg.feature.available(
+                borgmatic.borg.feature.Feature.SEPARATE_REPOSITORY_ARCHIVE, local_borg_version
+            )
+            else (
+                flags.make_repository_archive_flags(repository, archive, local_borg_version)
+                if archive
+                else flags.make_repository_flags(repository, local_borg_version)
+            )
+        )
+    )
+
+    if global_arguments.dry_run:
+        logger.info('Skipping the archive recreation (dry run)')
+        return
+
+    borgmatic.execute.execute_command(
+        full_command=recreate_command,
+        output_log_level=logging.INFO,
+        environment=borgmatic.borg.environment.make_environment(config),
+        working_directory=borgmatic.config.paths.get_working_directory(config),
+        borg_local_path=local_path,
+        borg_exit_codes=config.get('borg_exit_codes'),
+    )

borgmatic/borg/repo_create.py

@@ -24,7 +24,7 @@ def create_repository(
     copy_crypt_key=False,
     append_only=None,
     storage_quota=None,
-    make_parent_dirs=False,
+    make_parent_directories=False,
     local_path='borg',
     remote_path=None,
 ):
@@ -57,7 +57,7 @@ def create_repository(
                 f'Requested encryption mode "{encryption_mode}" does not match existing repository encryption mode "{repository_encryption_mode}"'
             )
 
-        logger.info(f'{repository_path}: Repository already exists. Skipping creation.')
+        logger.info('Repository already exists. Skipping creation.')
         return
     except subprocess.CalledProcessError as error:
         if error.returncode not in REPO_INFO_REPOSITORY_NOT_FOUND_EXIT_CODES:
@@ -79,10 +79,10 @@ def create_repository(
         + (('--copy-crypt-key',) if copy_crypt_key else ())
         + (('--append-only',) if append_only else ())
         + (('--storage-quota', storage_quota) if storage_quota else ())
-        + (('--make-parent-dirs',) if make_parent_dirs else ())
+        + (('--make-parent-dirs',) if make_parent_directories else ())
         + (('--info',) if logger.getEffectiveLevel() == logging.INFO else ())
         + (('--debug',) if logger.isEnabledFor(logging.DEBUG) else ())
-        + (('--log-json',) if global_arguments.log_json else ())
+        + (('--log-json',) if config.get('log_json') else ())
         + (('--lock-wait', str(lock_wait)) if lock_wait else ())
         + (('--remote-path', remote_path) if remote_path else ())
         + (('--umask', str(umask)) if umask else ())
@@ -91,14 +91,14 @@ def create_repository(
     )
 
     if dry_run:
-        logging.info(f'{repository_path}: Skipping repository creation (dry run)')
+        logging.info('Skipping repository creation (dry run)')
         return
 
     # Do not capture output here, so as to support interactive prompts.
     execute_command(
         repo_create_command,
         output_file=DO_NOT_CAPTURE,
-        extra_environment=environment.make_environment(config),
+        environment=environment.make_environment(config),
         working_directory=borgmatic.config.paths.get_working_directory(config),
         borg_local_path=local_path,
         borg_exit_codes=config.get('borg_exit_codes'),

borgmatic/borg/repo_delete.py

@@ -37,16 +37,16 @@ def make_repo_delete_command(
         + borgmatic.borg.flags.make_flags('dry-run', global_arguments.dry_run)
         + borgmatic.borg.flags.make_flags('remote-path', remote_path)
         + borgmatic.borg.flags.make_flags('umask', config.get('umask'))
-        + borgmatic.borg.flags.make_flags('log-json', global_arguments.log_json)
+        + borgmatic.borg.flags.make_flags('log-json', config.get('log_json'))
         + borgmatic.borg.flags.make_flags('lock-wait', config.get('lock_wait'))
-        + borgmatic.borg.flags.make_flags('list', repo_delete_arguments.list_archives)
+        + borgmatic.borg.flags.make_flags('list', config.get('list_details'))
         + (
             (('--force',) + (('--force',) if repo_delete_arguments.force >= 2 else ()))
             if repo_delete_arguments.force
             else ()
         )
         + borgmatic.borg.flags.make_flags_from_arguments(
-            repo_delete_arguments, excludes=('list_archives', 'force', 'repository')
+            repo_delete_arguments, excludes=('list_details', 'force', 'repository')
         )
         + borgmatic.borg.flags.make_repository_flags(repository['path'], local_borg_version)
     )
@@ -88,7 +88,7 @@ def delete_repository(
             if repo_delete_arguments.force or repo_delete_arguments.cache_only
             else borgmatic.execute.DO_NOT_CAPTURE
         ),
-        extra_environment=borgmatic.borg.environment.make_environment(config),
+        environment=borgmatic.borg.environment.make_environment(config),
         working_directory=borgmatic.config.paths.get_working_directory(config),
         borg_local_path=local_path,
         borg_exit_codes=config.get('borg_exit_codes'),

borgmatic/borg/repo_info.py

@@ -44,20 +44,19 @@ def display_repository_info(
         )
         + flags.make_flags('remote-path', remote_path)
         + flags.make_flags('umask', config.get('umask'))
-        + flags.make_flags('log-json', global_arguments.log_json)
+        + flags.make_flags('log-json', config.get('log_json'))
         + flags.make_flags('lock-wait', lock_wait)
         + (('--json',) if repo_info_arguments.json else ())
         + flags.make_repository_flags(repository_path, local_borg_version)
     )
 
-    extra_environment = environment.make_environment(config)
     working_directory = borgmatic.config.paths.get_working_directory(config)
     borg_exit_codes = config.get('borg_exit_codes')
 
     if repo_info_arguments.json:
         return execute_command_and_capture_output(
             full_command,
-            extra_environment=extra_environment,
+            environment=environment.make_environment(config),
             working_directory=working_directory,
             borg_local_path=local_path,
             borg_exit_codes=borg_exit_codes,
@@ -66,7 +65,7 @@ def display_repository_info(
         execute_command(
             full_command,
             output_log_level=logging.ANSWER,
-            extra_environment=extra_environment,
+            environment=environment.make_environment(config),
             working_directory=working_directory,
             borg_local_path=local_path,
             borg_exit_codes=borg_exit_codes,

borgmatic/borg/repo_list.py

@@ -40,7 +40,7 @@ def resolve_archive_name(
         )
         + flags.make_flags('remote-path', remote_path)
         + flags.make_flags('umask', config.get('umask'))
-        + flags.make_flags('log-json', global_arguments.log_json)
+        + flags.make_flags('log-json', config.get('log_json'))
         + flags.make_flags('lock-wait', config.get('lock_wait'))
         + flags.make_flags('last', 1)
         + ('--short',)
@@ -49,7 +49,7 @@ def resolve_archive_name(
 
     output = execute_command_and_capture_output(
         full_command,
-        extra_environment=environment.make_environment(config),
+        environment=environment.make_environment(config),
         working_directory=borgmatic.config.paths.get_working_directory(config),
         borg_local_path=local_path,
         borg_exit_codes=config.get('borg_exit_codes'),
@@ -59,7 +59,7 @@ def resolve_archive_name(
     except IndexError:
         raise ValueError('No archives found in the repository')
 
-    logger.debug(f'{repository_path}: Latest archive is {latest_archive}')
+    logger.debug(f'Latest archive is {latest_archive}')
 
     return latest_archive
 
@@ -102,7 +102,7 @@ def make_repo_list_command(
         )
         + flags.make_flags('remote-path', remote_path)
         + flags.make_flags('umask', config.get('umask'))
-        + flags.make_flags('log-json', global_arguments.log_json)
+        + flags.make_flags('log-json', config.get('log_json'))
         + flags.make_flags('lock-wait', config.get('lock_wait'))
         + (
             (
@@ -113,7 +113,7 @@ def make_repo_list_command(
             if repo_list_arguments.prefix
             else (
                 flags.make_match_archives_flags(
-                    repo_list_arguments.match_archives or config.get('match_archives'),
+                    config.get('match_archives'),
                     config.get('archive_name_format'),
                     local_borg_version,
                 )
@@ -140,7 +140,6 @@ def list_repository(
     return JSON output).
     '''
     borgmatic.logger.add_custom_log_levels()
-    borg_environment = environment.make_environment(config)
 
     main_command = make_repo_list_command(
         repository_path,
@@ -165,7 +164,7 @@ def list_repository(
 
     json_listing = execute_command_and_capture_output(
         json_command,
-        extra_environment=borg_environment,
+        environment=environment.make_environment(config),
         working_directory=working_directory,
         borg_local_path=local_path,
         borg_exit_codes=borg_exit_codes,
@@ -179,7 +178,7 @@ def list_repository(
     execute_command(
         main_command,
         output_log_level=logging.ANSWER,
-        extra_environment=borg_environment,
+        environment=environment.make_environment(config),
         working_directory=working_directory,
         borg_local_path=local_path,
         borg_exit_codes=borg_exit_codes,

borgmatic/borg/transfer.py

@@ -31,18 +31,23 @@ def transfer_archives(
         + (('--debug', '--show-rc') if logger.isEnabledFor(logging.DEBUG) else ())
         + flags.make_flags('remote-path', remote_path)
         + flags.make_flags('umask', config.get('umask'))
-        + flags.make_flags('log-json', global_arguments.log_json)
-        + flags.make_flags('lock-wait', config.get('lock_wait', None))
+        + flags.make_flags('log-json', config.get('log_json'))
+        + flags.make_flags('lock-wait', config.get('lock_wait'))
+        + flags.make_flags('progress', config.get('progress'))
         + (
             flags.make_flags_from_arguments(
                 transfer_arguments,
-                excludes=('repository', 'source_repository', 'archive', 'match_archives'),
+                excludes=(
+                    'repository',
+                    'source_repository',
+                    'archive',
+                    'match_archives',
+                    'progress',
+                ),
             )
             or (
                 flags.make_match_archives_flags(
-                    transfer_arguments.match_archives
-                    or transfer_arguments.archive
-                    or config.get('match_archives'),
+                    transfer_arguments.archive or config.get('match_archives'),
                     config.get('archive_name_format'),
                     local_borg_version,
                 )
@@ -56,8 +61,8 @@ def transfer_archives(
     return execute_command(
         full_command,
         output_log_level=logging.ANSWER,
-        output_file=DO_NOT_CAPTURE if transfer_arguments.progress else None,
-        extra_environment=environment.make_environment(config),
+        output_file=DO_NOT_CAPTURE if config.get('progress') else None,
+        environment=environment.make_environment(config),
         working_directory=borgmatic.config.paths.get_working_directory(config),
         borg_local_path=local_path,
         borg_exit_codes=config.get('borg_exit_codes'),

borgmatic/borg/version.py

@@ -21,7 +21,7 @@ def local_borg_version(config, local_path='borg'):
     )
     output = execute_command_and_capture_output(
         full_command,
-        extra_environment=environment.make_environment(config),
+        environment=environment.make_environment(config),
         working_directory=borgmatic.config.paths.get_working_directory(config),
         borg_local_path=local_path,
         borg_exit_codes=config.get('borg_exit_codes'),

borgmatic/commands/arguments.py

@@ -1,8 +1,13 @@
 import collections
+import io
 import itertools
+import re
 import sys
 from argparse import ArgumentParser
 
+import ruamel.yaml
+
+import borgmatic.config.schema
 from borgmatic.config import collect
 
 ACTION_ALIASES = {
@@ -27,6 +32,7 @@ ACTION_ALIASES = {
     'break-lock': [],
     'key': [],
     'borg': [],
+    'recreate': [],
 }
 
 
@@ -63,9 +69,9 @@ def get_subactions_for_actions(action_parsers):
 
 def omit_values_colliding_with_action_names(unparsed_arguments, parsed_arguments):
     '''
-    Given a sequence of string arguments and a dict from action name to parsed argparse.Namespace
-    arguments, return the string arguments with any values omitted that happen to be the same as
-    the name of a borgmatic action.
+    Given unparsed arguments as a sequence of strings and a dict from action name to parsed
+    argparse.Namespace arguments, return the string arguments with any values omitted that happen to
+    be the same as the name of a borgmatic action.
 
     This prevents, for instance, "check --only extract" from triggering the "extract" action.
     '''
@@ -282,17 +288,278 @@ def parse_arguments_for_actions(unparsed_arguments, action_parsers, global_parse
     )
 
 
-def make_parsers():
+OMITTED_FLAG_NAMES = {'match-archives', 'progress', 'statistics', 'list-details'}
+
+
+def make_argument_description(schema, flag_name):
     '''
-    Build a global arguments parser, individual action parsers, and a combined parser containing
-    both. Return them as a tuple. The global parser is useful for parsing just global arguments
-    while ignoring actions, and the combined parser is handy for displaying help that includes
-    everything: global flags, a list of actions, etc.
+    Given a configuration schema dict and a flag name for it, extend the schema's description with
+    an example or additional information as appropriate based on its type. Return the updated
+    description for use in a command-line argument.
+    '''
+    description = schema.get('description')
+    schema_type = schema.get('type')
+    example = schema.get('example')
+    pieces = [description] if description else []
+
+    if '[0]' in flag_name:
+        pieces.append(
+            ' To specify a different list element, replace the "[0]" with another array index ("[1]", "[2]", etc.).'
+        )
+
+    if example and schema_type in ('array', 'object'):
+        example_buffer = io.StringIO()
+        yaml = ruamel.yaml.YAML(typ='safe')
+        yaml.default_flow_style = True
+        yaml.dump(example, example_buffer)
+
+        pieces.append(f'Example value: "{example_buffer.getvalue().strip()}"')
+
+    return ' '.join(pieces).replace('%', '%%')
+
+
+def add_array_element_arguments(arguments_group, unparsed_arguments, flag_name):
+    r'''
+    Given an argparse._ArgumentGroup instance, a sequence of unparsed argument strings, and a dotted
+    flag name, add command-line array element flags that correspond to the given unparsed arguments.
+
+    Here's the background. We want to support flags that can have arbitrary indices like:
+
+      --foo.bar[1].baz
+
+    But argparse doesn't support that natively because the index can be an arbitrary number. We
+    won't let that stop us though, will we?
+
+    If the current flag name has an array component in it (e.g. a name with "[0]"), then make a
+    pattern that would match the flag name regardless of the number that's in it. The idea is that
+    we want to look for unparsed arguments that appear like the flag name, but instead of "[0]" they
+    have, say, "[1]" or "[123]".
+
+    Next, we check each unparsed argument against that pattern. If one of them matches, add an
+    argument flag for it to the argument parser group. Example:
+
+    Let's say flag_name is:
+
+        --foo.bar[0].baz
+
+    ... then the regular expression pattern will be:
+
+        ^--foo\.bar\[\d+\]\.baz
+
+    ... and, if that matches an unparsed argument of:
+
+        --foo.bar[1].baz
+
+    ... then an argument flag will get added equal to that unparsed argument. And so the unparsed
+    argument will match it when parsing is performed! In this manner, we're using the actual user
+    CLI input to inform what exact flags we support.
+    '''
+    if '[0]' not in flag_name or not unparsed_arguments or '--help' in unparsed_arguments:
+        return
+
+    pattern = re.compile('^--' + flag_name.replace('[0]', r'\[\d+\]').replace('.', r'\.') + '$')
+
+    try:
+        # Find an existing list index flag (and its action) corresponding to the given flag name.
+        (argument_action, existing_flag_name) = next(
+            (action, action_flag_name)
+            for action in arguments_group._group_actions
+            for action_flag_name in action.option_strings
+            if pattern.match(action_flag_name)
+            if f'--{flag_name}'.startswith(action_flag_name)
+        )
+
+        # Based on the type of the action (e.g. argparse._StoreTrueAction), look up the corresponding
+        # action registry name (e.g., "store_true") to pass to add_argument(action=...) below.
+        action_registry_name = next(
+            registry_name
+            for registry_name, action_type in arguments_group._registries['action'].items()
+            # Not using isinstance() here because we only want an exact match—no parent classes.
+            if type(argument_action) is action_type
+        )
+    except StopIteration:
+        return
+
+    for unparsed in unparsed_arguments:
+        unparsed_flag_name = unparsed.split('=', 1)[0]
+        destination_name = unparsed_flag_name.lstrip('-').replace('-', '_')
+
+        if not pattern.match(unparsed_flag_name) or unparsed_flag_name == existing_flag_name:
+            continue
+
+        if action_registry_name in ('store_true', 'store_false'):
+            arguments_group.add_argument(
+                unparsed_flag_name,
+                action=action_registry_name,
+                default=argument_action.default,
+                dest=destination_name,
+                required=argument_action.nargs,
+            )
+        else:
+            arguments_group.add_argument(
+                unparsed_flag_name,
+                action=action_registry_name,
+                choices=argument_action.choices,
+                default=argument_action.default,
+                dest=destination_name,
+                nargs=argument_action.nargs,
+                required=argument_action.nargs,
+                type=argument_action.type,
+            )
+
+
+def add_arguments_from_schema(arguments_group, schema, unparsed_arguments, names=None):
+    '''
+    Given an argparse._ArgumentGroup instance, a configuration schema dict, and a sequence of
+    unparsed argument strings, convert the entire schema into corresponding command-line flags and
+    add them to the arguments group.
+
+    For instance, given a schema of:
+
+        {
+            'type': 'object',
+            'properties': {
+                'foo': {
+                    'type': 'object',
+                    'properties': {
+                        'bar': {'type': 'integer'}
+                    }
+                }
+            }
+        }
+
+    ... the following flag will be added to the arguments group:
+
+        --foo.bar
+
+    If "foo" is instead an array of objects, both of the following will get added:
+
+        --foo
+        --foo[0].bar
+
+    And if names are also passed in, they are considered to be the name components of an option
+    (e.g. "foo" and "bar") and are used to construct a resulting flag.
+
+    Bail if the schema is not a dict.
+    '''
+    if names is None:
+        names = ()
+
+    if not isinstance(schema, dict):
+        return
+
+    schema_type = schema.get('type')
+
+    # If this option has multiple types, just use the first one (that isn't "null").
+    if isinstance(schema_type, list):
+        try:
+            schema_type = next(single_type for single_type in schema_type if single_type != 'null')
+        except StopIteration:
+            raise ValueError(f'Unknown type in configuration schema: {schema_type}')
+
+    # If this is an "object" type, recurse for each child option ("property").
+    if schema_type == 'object':
+        properties = schema.get('properties')
+
+        # If there are child properties, recurse for each one. But if there are no child properties,
+        # fall through so that a flag gets added below for the (empty) object.
+        if properties:
+            for name, child in properties.items():
+                add_arguments_from_schema(
+                    arguments_group, child, unparsed_arguments, names + (name,)
+                )
+
+            return
+
+    # If this is an "array" type, recurse for each items type child option. Don't return yet so that
+    # a flag also gets added below for the array itself.
+    if schema_type == 'array':
+        items = schema.get('items', {})
+        properties = borgmatic.config.schema.get_properties(items)
+
+        if properties:
+            for name, child in properties.items():
+                add_arguments_from_schema(
+                    arguments_group,
+                    child,
+                    unparsed_arguments,
+                    names[:-1] + (f'{names[-1]}[0]',) + (name,),
+                )
+        # If there aren't any children, then this is an array of scalars. Recurse accordingly.
+        else:
+            add_arguments_from_schema(
+                arguments_group, items, unparsed_arguments, names[:-1] + (f'{names[-1]}[0]',)
+            )
+
+    flag_name = '.'.join(names).replace('_', '-')
+
+    # Certain options already have corresponding flags on individual actions (like "create
+    # --progress"), so don't bother adding them to the global flags.
+    if not flag_name or flag_name in OMITTED_FLAG_NAMES:
+        return
+
+    metavar = names[-1].upper()
+    description = make_argument_description(schema, flag_name)
+
+    # The object=str and array=str given here is to support specifying an object or an array as a
+    # YAML string on the command-line.
+    argument_type = borgmatic.config.schema.parse_type(schema_type, object=str, array=str)
+
+    # As a UX nicety, add separate true and false flags for boolean options.
+    if schema_type == 'boolean':
+        arguments_group.add_argument(
+            f'--{flag_name}',
+            action='store_true',
+            default=None,
+            help=description,
+        )
+
+        if names[-1].startswith('no_'):
+            no_flag_name = '.'.join(names[:-1] + (names[-1][len('no_') :],)).replace('_', '-')
+        else:
+            no_flag_name = '.'.join(names[:-1] + ('no-' + names[-1],)).replace('_', '-')
+
+        arguments_group.add_argument(
+            f'--{no_flag_name}',
+            dest=flag_name.replace('-', '_'),
+            action='store_false',
+            default=None,
+            help=f'Set the --{flag_name} value to false.',
+        )
+    elif flag_name == 'verbosity':
+        arguments_group.add_argument(
+            '-v',
+            '--verbosity',
+            type=argument_type,
+            metavar=metavar,
+            help=description,
+        )
+    else:
+        arguments_group.add_argument(
+            f'--{flag_name}',
+            type=argument_type,
+            metavar=metavar,
+            help=description,
+        )
+
+    add_array_element_arguments(arguments_group, unparsed_arguments, flag_name)
+
+
+def make_parsers(schema, unparsed_arguments):
+    '''
+    Given a configuration schema dict and unparsed arguments as a sequence of strings, build a
+    global arguments parser, individual action parsers, and a combined parser containing both.
+    Return them as a tuple. The global parser is useful for parsing just global arguments while
+    ignoring actions, and the combined parser is handy for displaying help that includes everything:
+    global flags, a list of actions, etc.
     '''
     config_paths = collect.get_default_config_paths(expand_home=True)
     unexpanded_config_paths = collect.get_default_config_paths(expand_home=False)
 
-    global_parser = ArgumentParser(add_help=False)
+    # Using allow_abbrev=False here prevents the global parser from erroring about "ambiguous"
+    # options like --encryption. Such options are intended for an action parser rather than the
+    # global parser, and so we don't want to error on them here.
+    global_parser = ArgumentParser(allow_abbrev=False, add_help=False)
     global_group = global_parser.add_argument_group('global arguments')
 
     global_group.add_argument(
@@ -309,65 +576,18 @@ def make_parsers():
         action='store_true',
         help='Go through the motions, but do not actually write to any repositories',
     )
-    global_group.add_argument(
-        '-nc', '--no-color', dest='no_color', action='store_true', help='Disable colored output'
-    )
-    global_group.add_argument(
-        '-v',
-        '--verbosity',
-        type=int,
-        choices=range(-2, 3),
-        default=0,
-        help='Display verbose progress to the console: -2 (disabled), -1 (errors only), 0 (responses to actions, the default), 1 (info about steps borgmatic is taking), or 2 (debug)',
-    )
-    global_group.add_argument(
-        '--syslog-verbosity',
-        type=int,
-        choices=range(-2, 3),
-        default=-2,
-        help='Log verbose progress to syslog: -2 (disabled, the default), -1 (errors only), 0 (responses to actions), 1 (info about steps borgmatic is taking), or 2 (debug)',
-    )
-    global_group.add_argument(
-        '--log-file-verbosity',
-        type=int,
-        choices=range(-2, 3),
-        default=1,
-        help='When --log-file is given, log verbose progress to file: -2 (disabled), -1 (errors only), 0 (responses to actions), 1 (info about steps borgmatic is taking, the default), or 2 (debug)',
-    )
-    global_group.add_argument(
-        '--monitoring-verbosity',
-        type=int,
-        choices=range(-2, 3),
-        default=1,
-        help='When a monitoring integration supporting logging is configured, log verbose progress to it: -2 (disabled), -1 (errors only), responses to actions (0), 1 (info about steps borgmatic is taking, the default), or 2 (debug)',
-    )
-    global_group.add_argument(
-        '--log-file',
-        type=str,
-        help='Write log messages to this file instead of syslog',
-    )
-    global_group.add_argument(
-        '--log-file-format',
-        type=str,
-        help='Log format string used for log messages written to the log file',
-    )
-    global_group.add_argument(
-        '--log-json',
-        action='store_true',
-        help='Write log messages and console output as one JSON object per log line instead of formatted text',
-    )
     global_group.add_argument(
         '--override',
         metavar='OPTION.SUBOPTION=VALUE',
         dest='overrides',
         action='append',
-        help='Configuration file option to override with specified value, see documentation for overriding list or key/value options, can specify flag multiple times',
+        help='Deprecated. Configuration file option to override with specified value, see documentation for overriding list or key/value options, can specify flag multiple times',
     )
     global_group.add_argument(
         '--no-environment-interpolation',
         dest='resolve_env',
         action='store_false',
-        help='Do not resolve environment variables in configuration file',
+        help='Do not resolve environment variables in configuration files',
     )
     global_group.add_argument(
         '--bash-completion',
@@ -388,6 +608,7 @@ def make_parsers():
         action='store_true',
         help='Display installed version number of borgmatic and exit',
     )
+    add_arguments_from_schema(global_group, schema, unparsed_arguments)
 
     global_plus_action_parser = ArgumentParser(
         description='''
@@ -415,7 +636,6 @@ def make_parsers():
         '--encryption',
         dest='encryption_mode',
         help='Borg repository encryption mode',
-        required=True,
     )
     repo_create_group.add_argument(
         '--source-repository',
@@ -434,6 +654,7 @@ def make_parsers():
     )
     repo_create_group.add_argument(
         '--append-only',
+        default=None,
         action='store_true',
         help='Create an append-only repository',
     )
@@ -443,6 +664,8 @@ def make_parsers():
     )
     repo_create_group.add_argument(
         '--make-parent-dirs',
+        dest='make_parent_directories',
+        default=None,
         action='store_true',
         help='Create any missing parent directories of the repository directory',
     )
@@ -477,7 +700,7 @@ def make_parsers():
     )
     transfer_group.add_argument(
         '--progress',
-        default=False,
+        default=None,
         action='store_true',
         help='Display progress as each archive is transferred',
     )
@@ -544,13 +767,17 @@ def make_parsers():
     )
     prune_group.add_argument(
         '--stats',
-        dest='stats',
-        default=False,
+        dest='statistics',
+        default=None,
         action='store_true',
-        help='Display statistics of the pruned archive',
+        help='Display statistics of the pruned archive [Borg 1 only]',
     )
     prune_group.add_argument(
-        '--list', dest='list_archives', action='store_true', help='List archives kept/pruned'
+        '--list',
+        dest='list_details',
+        default=None,
+        action='store_true',
+        help='List archives kept/pruned',
     )
     prune_group.add_argument(
         '--oldest',
@@ -588,8 +815,7 @@ def make_parsers():
     )
     compact_group.add_argument(
         '--progress',
-        dest='progress',
-        default=False,
+        default=None,
         action='store_true',
         help='Display progress as each segment is compacted',
     )
@@ -603,7 +829,7 @@ def make_parsers():
     compact_group.add_argument(
         '--threshold',
         type=int,
-        dest='threshold',
+        dest='compact_threshold',
         help='Minimum saved space percentage threshold for compacting a segment, defaults to 10',
     )
     compact_group.add_argument(
@@ -624,20 +850,24 @@ def make_parsers():
     )
     create_group.add_argument(
         '--progress',
-        dest='progress',
-        default=False,
+        default=None,
         action='store_true',
         help='Display progress for each file as it is backed up',
     )
     create_group.add_argument(
         '--stats',
-        dest='stats',
-        default=False,
+        dest='statistics',
+        default=None,
         action='store_true',
         help='Display statistics of archive',
     )
     create_group.add_argument(
-        '--list', '--files', dest='list_files', action='store_true', help='Show per-file details'
+        '--list',
+        '--files',
+        dest='list_details',
+        default=None,
+        action='store_true',
+        help='Show per-file details',
     )
     create_group.add_argument(
         '--json', dest='json', default=False, action='store_true', help='Output results as JSON'
@@ -658,8 +888,7 @@ def make_parsers():
     )
     check_group.add_argument(
         '--progress',
-        dest='progress',
-        default=False,
+        default=None,
         action='store_true',
         help='Display progress for each file as it is checked',
     )
@@ -716,12 +945,15 @@ def make_parsers():
     )
     delete_group.add_argument(
         '--list',
-        dest='list_archives',
+        dest='list_details',
+        default=None,
         action='store_true',
         help='Show details for the deleted archives',
     )
     delete_group.add_argument(
         '--stats',
+        dest='statistics',
+        default=None,
         action='store_true',
         help='Display statistics for the deleted archives',
     )
@@ -826,8 +1058,7 @@ def make_parsers():
     )
     extract_group.add_argument(
         '--progress',
-        dest='progress',
-        default=False,
+        default=None,
         action='store_true',
         help='Display progress for each file as it is extracted',
     )
@@ -902,8 +1133,7 @@ def make_parsers():
     )
     config_bootstrap_group.add_argument(
         '--progress',
-        dest='progress',
-        default=False,
+        default=None,
         action='store_true',
         help='Display progress for each file as it is extracted',
     )
@@ -996,7 +1226,12 @@ def make_parsers():
         '--tar-filter', help='Name of filter program to pipe data through'
     )
     export_tar_group.add_argument(
-        '--list', '--files', dest='list_files', action='store_true', help='Show per-file details'
+        '--list',
+        '--files',
+        dest='list_details',
+        default=None,
+        action='store_true',
+        help='Show per-file details',
     )
     export_tar_group.add_argument(
         '--strip-components',
@@ -1107,7 +1342,8 @@ def make_parsers():
     )
     repo_delete_group.add_argument(
         '--list',
-        dest='list_archives',
+        dest='list_details',
+        default=None,
         action='store_true',
         help='Show details for the archives in the given repository',
     )
@@ -1479,6 +1715,31 @@ def make_parsers():
         '-h', '--help', action='help', help='Show this help message and exit'
     )
 
+    key_import_parser = key_parsers.add_parser(
+        'import',
+        help='Import a copy of the repository key from backup',
+        description='Import a copy of the repository key from backup',
+        add_help=False,
+    )
+    key_import_group = key_import_parser.add_argument_group('key import arguments')
+    key_import_group.add_argument(
+        '--paper',
+        action='store_true',
+        help='Import interactively from a backup done with --paper',
+    )
+    key_import_group.add_argument(
+        '--repository',
+        help='Path of repository to import the key from, defaults to the configured repository if there is only one, quoted globs supported',
+    )
+    key_import_group.add_argument(
+        '--path',
+        metavar='PATH',
+        help='Path to import the key from backup, defaults to stdin',
+    )
+    key_import_group.add_argument(
+        '-h', '--help', action='help', help='Show this help message and exit'
+    )
+
     key_change_passphrase_parser = key_parsers.add_parser(
         'change-passphrase',
         help='Change the passphrase protecting the repository key',
@@ -1496,6 +1757,56 @@ def make_parsers():
         '-h', '--help', action='help', help='Show this help message and exit'
     )
 
+    recreate_parser = action_parsers.add_parser(
+        'recreate',
+        aliases=ACTION_ALIASES['recreate'],
+        help='Recreate an archive in a repository (with Borg 1.2+, you must run compact afterwards to actually free space)',
+        description='Recreate an archive in a repository (with Borg 1.2+, you must run compact afterwards to actually free space)',
+        add_help=False,
+    )
+    recreate_group = recreate_parser.add_argument_group('recreate arguments')
+    recreate_group.add_argument(
+        '--repository',
+        help='Path of repository containing archive to recreate, defaults to the configured repository if there is only one, quoted globs supported',
+    )
+    recreate_group.add_argument(
+        '--archive',
+        help='Archive name, hash, or series to recreate',
+    )
+    recreate_group.add_argument(
+        '--list',
+        dest='list_details',
+        default=None,
+        action='store_true',
+        help='Show per-file details',
+    )
+    recreate_group.add_argument(
+        '--target',
+        metavar='TARGET',
+        help='Create a new archive from the specified archive (via --archive), without replacing it',
+    )
+    recreate_group.add_argument(
+        '--comment',
+        metavar='COMMENT',
+        help='Add a comment text to the archive or, if an archive is not provided, to all matching archives',
+    )
+    recreate_group.add_argument(
+        '--timestamp',
+        metavar='TIMESTAMP',
+        help='Manually override the archive creation date/time (UTC)',
+    )
+    recreate_group.add_argument(
+        '-a',
+        '--match-archives',
+        '--glob-archives',
+        dest='match_archives',
+        metavar='PATTERN',
+        help='Only consider archive names, hashes, or series matching this pattern [Borg 2.x+ only]',
+    )
+    recreate_group.add_argument(
+        '-h', '--help', action='help', help='Show this help message and exit'
+    )
+
     borg_parser = action_parsers.add_parser(
         'borg',
         aliases=ACTION_ALIASES['borg'],
@@ -1523,15 +1834,18 @@ def make_parsers():
     return global_parser, action_parsers, global_plus_action_parser
 
 
-def parse_arguments(*unparsed_arguments):
+def parse_arguments(schema, *unparsed_arguments):
     '''
-    Given command-line arguments with which this script was invoked, parse the arguments and return
-    them as a dict mapping from action name (or "global") to an argparse.Namespace instance.
+    Given a configuration schema dict and the command-line arguments with which this script was
+    invoked and unparsed arguments as a sequence of strings, parse the arguments and return them as
+    a dict mapping from action name (or "global") to an argparse.Namespace instance.
 
     Raise ValueError if the arguments cannot be parsed.
     Raise SystemExit with an error code of 0 if "--help" was requested.
     '''
-    global_parser, action_parsers, global_plus_action_parser = make_parsers()
+    global_parser, action_parsers, global_plus_action_parser = make_parsers(
+        schema, unparsed_arguments
+    )
     arguments, remaining_action_arguments = parse_arguments_for_actions(
         unparsed_arguments, action_parsers.choices, global_parser
     )
@@ -1559,15 +1873,6 @@ def parse_arguments(*unparsed_arguments):
             f"Unrecognized argument{'s' if len(unknown_arguments) > 1 else ''}: {' '.join(unknown_arguments)}"
         )
 
-    if 'create' in arguments and arguments['create'].list_files and arguments['create'].progress:
-        raise ValueError(
-            'With the create action, only one of --list (--files) and --progress flags can be used.'
-        )
-    if 'create' in arguments and arguments['create'].list_files and arguments['create'].json:
-        raise ValueError(
-            'With the create action, only one of --list (--files) and --json flags can be used.'
-        )
-
     if (
         ('list' in arguments and 'repo-info' in arguments and arguments['list'].json)
         or ('list' in arguments and 'info' in arguments and arguments['list'].json)
@@ -1575,15 +1880,6 @@ def parse_arguments(*unparsed_arguments):
     ):
         raise ValueError('With the --json flag, multiple actions cannot be used together.')
 
-    if (
-        'transfer' in arguments
-        and arguments['transfer'].archive
-        and arguments['transfer'].match_archives
-    ):
-        raise ValueError(
-            'With the transfer action, only one of --archive and --match-archives flags can be used.'
-        )
-
     if 'list' in arguments and (arguments['list'].prefix and arguments['list'].match_archives):
         raise ValueError(
             'With the list action, only one of --prefix or --match-archives flags can be used.'

borgmatic/commands/completion/bash.py

@@ -1,5 +1,7 @@
 import borgmatic.commands.arguments
 import borgmatic.commands.completion.actions
+import borgmatic.commands.completion.flag
+import borgmatic.config.validate
 
 
 def parser_flags(parser):
@@ -7,7 +9,12 @@ def parser_flags(parser):
     Given an argparse.ArgumentParser instance, return its argument flags in a space-separated
     string.
     '''
-    return ' '.join(option for action in parser._actions for option in action.option_strings)
+    return ' '.join(
+        flag_variant
+        for action in parser._actions
+        for flag_name in action.option_strings
+        for flag_variant in borgmatic.commands.completion.flag.variants(flag_name)
+    )
 
 
 def bash_completion():
@@ -19,7 +26,10 @@ def bash_completion():
         unused_global_parser,
         action_parsers,
         global_plus_action_parser,
-    ) = borgmatic.commands.arguments.make_parsers()
+    ) = borgmatic.commands.arguments.make_parsers(
+        schema=borgmatic.config.validate.load_schema(borgmatic.config.validate.schema_filename()),
+        unparsed_arguments=(),
+    )
     global_flags = parser_flags(global_plus_action_parser)
 
     # Avert your eyes.

borgmatic/commands/completion/fish.py

@@ -4,6 +4,7 @@ from textwrap import dedent
 
 import borgmatic.commands.arguments
 import borgmatic.commands.completion.actions
+import borgmatic.config.validate
 
 
 def has_file_options(action: Action):
@@ -26,9 +27,11 @@ def has_choice_options(action: Action):
 def has_unknown_required_param_options(action: Action):
     '''
     A catch-all for options that take a required parameter, but we don't know what the parameter is.
-    This should be used last. These are actions that take something like a glob, a list of numbers, or a string.
+    This should be used last. These are actions that take something like a glob, a list of numbers,
+    or a string.
 
-    Actions that match this pattern should not show the normal arguments, because those are unlikely to be valid.
+    Actions that match this pattern should not show the normal arguments, because those are unlikely
+    to be valid.
     '''
     return (
         action.required is True
@@ -52,9 +55,9 @@ def has_exact_options(action: Action):
 
 def exact_options_completion(action: Action):
     '''
-    Given an argparse.Action instance, return a completion invocation that forces file completions, options completion,
-    or just that some value follow the action, if the action takes such an argument and was the last action on the
-    command line prior to the cursor.
+    Given an argparse.Action instance, return a completion invocation that forces file completions,
+    options completion, or just that some value follow the action, if the action takes such an
+    argument and was the last action on the command line prior to the cursor.
 
     Otherwise, return an empty string.
     '''
@@ -80,8 +83,9 @@ def exact_options_completion(action: Action):
 
 def dedent_strip_as_tuple(string: str):
     '''
-    Dedent a string, then strip it to avoid requiring your first line to have content, then return a tuple of the string.
-    Makes it easier to write multiline strings for completions when you join them with a tuple.
+    Dedent a string, then strip it to avoid requiring your first line to have content, then return a
+    tuple of the string. Makes it easier to write multiline strings for completions when you join
+    them with a tuple.
     '''
     return (dedent(string).strip('\n'),)
 
@@ -95,7 +99,10 @@ def fish_completion():
         unused_global_parser,
         action_parsers,
         global_plus_action_parser,
-    ) = borgmatic.commands.arguments.make_parsers()
+    ) = borgmatic.commands.arguments.make_parsers(
+        schema=borgmatic.config.validate.load_schema(borgmatic.config.validate.schema_filename()),
+        unparsed_arguments=(),
+    )
 
     all_action_parsers = ' '.join(action for action in action_parsers.choices.keys())
 

borgmatic/commands/completion/flag.py

@@ -0,0 +1,13 @@
+def variants(flag_name):
+    '''
+    Given a flag name as a string, yield it and any variations that should be complete-able as well.
+    For instance, for a string like "--foo[0].bar", yield "--foo[0].bar", "--foo[1].bar", ...,
+    "--foo[9].bar".
+    '''
+    if '[0]' in flag_name:
+        for index in range(0, 10):
+            yield flag_name.replace('[0]', f'[{index}]')
+
+        return
+
+    yield flag_name

borgmatic/config/arguments.py

@@ -0,0 +1,176 @@
+import io
+import re
+
+import ruamel.yaml
+
+import borgmatic.config.schema
+
+LIST_INDEX_KEY_PATTERN = re.compile(r'^(?P<list_name>[a-zA-z-]+)\[(?P<index>\d+)\]$')
+
+
+def set_values(config, keys, value):
+    '''
+    Given a configuration dict, a sequence of parsed key strings, and a string value, descend into
+    the configuration hierarchy based on the given keys and set the value into the right place.
+    For example, consider these keys:
+
+        ('foo', 'bar', 'baz')
+
+    This looks up "foo" in the given configuration dict. And within that, it looks up "bar". And
+    then within that, it looks up "baz" and sets it to the given value. Another example:
+
+        ('mylist[0]', 'foo')
+
+    This looks for the zeroth element of "mylist" in the given configuration. And within that, it
+    looks up "foo" and sets it to the given value.
+    '''
+    if not keys:
+        return
+
+    first_key = keys[0]
+
+    # Support "mylist[0]" list index syntax.
+    match = LIST_INDEX_KEY_PATTERN.match(first_key)
+
+    if match:
+        list_key = match.group('list_name')
+        list_index = int(match.group('index'))
+
+        try:
+            if len(keys) == 1:
+                config[list_key][list_index] = value
+
+                return
+
+            if list_key not in config:
+                config[list_key] = []
+
+            set_values(config[list_key][list_index], keys[1:], value)
+        except (IndexError, KeyError):
+            raise ValueError(f'Argument list index {first_key} is out of range')
+
+        return
+
+    if len(keys) == 1:
+        config[first_key] = value
+
+        return
+
+    if first_key not in config:
+        config[first_key] = {}
+
+    set_values(config[first_key], keys[1:], value)
+
+
+def type_for_option(schema, option_keys):
+    '''
+    Given a configuration schema dict and a sequence of keys identifying a potentially nested
+    option, e.g. ('extra_borg_options', 'create'), return the schema type of that option as a
+    string.
+
+    Return None if the option or its type cannot be found in the schema.
+    '''
+    option_schema = schema
+
+    for key in option_keys:
+        # Support "name[0]"-style list index syntax.
+        match = LIST_INDEX_KEY_PATTERN.match(key)
+        properties = borgmatic.config.schema.get_properties(option_schema)
+
+        try:
+            if match:
+                option_schema = properties[match.group('list_name')]['items']
+            else:
+                option_schema = properties[key]
+        except KeyError:
+            return None
+
+    try:
+        return option_schema['type']
+    except KeyError:
+        return None
+
+
+def convert_value_type(value, option_type):
+    '''
+    Given a string value and its schema type as a string, determine its logical type (string,
+    boolean, integer, etc.), and return it converted to that type.
+
+    If the destination option type is a string, then leave the value as-is so that special
+    characters in it don't get interpreted as YAML during conversion.
+
+    And if the source value isn't a string, return it as-is.
+
+    Raise ruamel.yaml.error.YAMLError if there's a parse issue with the YAML.
+    Raise ValueError if the parsed value doesn't match the option type.
+    '''
+    if not isinstance(value, str):
+        return value
+
+    if option_type == 'string':
+        return value
+
+    try:
+        parsed_value = ruamel.yaml.YAML(typ='safe').load(io.StringIO(value))
+    except ruamel.yaml.error.YAMLError as error:
+        raise ValueError(f'Argument value "{value}" is invalid: {error.problem}')
+
+    if not isinstance(parsed_value, borgmatic.config.schema.parse_type(option_type)):
+        raise ValueError(f'Argument value "{value}" is not of the expected type: {option_type}')
+
+    return parsed_value
+
+
+def prepare_arguments_for_config(global_arguments, schema):
+    '''
+    Given global arguments as an argparse.Namespace and a configuration schema dict, parse each
+    argument that corresponds to an option in the schema and return a sequence of tuples (keys,
+    values) for that option, where keys is a sequence of strings. For instance, given the following
+    arguments:
+
+        argparse.Namespace(**{'my_option.sub_option': 'value1', 'other_option': 'value2'})
+
+    ... return this:
+
+        (
+            (('my_option', 'sub_option'), 'value1'),
+            (('other_option',), 'value2'),
+        )
+    '''
+    prepared_values = []
+
+    for argument_name, value in global_arguments.__dict__.items():
+        if value is None:
+            continue
+
+        keys = tuple(argument_name.split('.'))
+        option_type = type_for_option(schema, keys)
+
+        # The argument doesn't correspond to any option in the schema, so ignore it. It's
+        # probably a flag that borgmatic has on the command-line but not in configuration.
+        if option_type is None:
+            continue
+
+        prepared_values.append(
+            (
+                keys,
+                convert_value_type(value, option_type),
+            )
+        )
+
+    return tuple(prepared_values)
+
+
+def apply_arguments_to_config(config, schema, arguments):
+    '''
+    Given a configuration dict, a corresponding configuration schema dict, and arguments as a dict
+    from action name to argparse.Namespace, set those given argument values into their corresponding
+    configuration options in the configuration dict.
+
+    This supports argument flags of the from "--foo.bar.baz" where each dotted component is a nested
+    configuration object. Additionally, flags like "--foo.bar[0].baz" are supported to update a list
+    element in the configuration.
+    '''
+    for action_arguments in arguments.values():
+        for keys, value in prepare_arguments_for_config(action_arguments, schema):
+            set_values(config, keys, value)

borgmatic/config/generate.py

@@ -5,6 +5,7 @@ import re
 
 import ruamel.yaml
 
+import borgmatic.config.schema
 from borgmatic.config import load, normalize
 
 INDENT = 4
@@ -21,45 +22,59 @@ def insert_newline_before_comment(config, field_name):
     )
 
 
-def get_properties(schema):
-    '''
-    Given a schema dict, return its properties. But if it's got sub-schemas with multiple different
-    potential properties, returned their merged properties instead.
-    '''
-    if 'oneOf' in schema:
-        return dict(
-            collections.ChainMap(*[sub_schema['properties'] for sub_schema in schema['oneOf']])
-        )
-
-    return schema['properties']
+SCALAR_SCHEMA_TYPES = {'string', 'boolean', 'integer', 'number'}
 
 
-def schema_to_sample_configuration(schema, level=0, parent_is_sequence=False):
+def schema_to_sample_configuration(schema, source_config=None, level=0, parent_is_sequence=False):
     '''
-    Given a loaded configuration schema, generate and return sample config for it. Include comments
-    for each option based on the schema "description".
+    Given a loaded configuration schema and a source configuration, generate and return sample
+    config for the schema. Include comments for each option based on the schema "description".
+
+    If a source config is given, walk it alongside the given schema so that both can be taken into
+    account when commenting out particular options in add_comments_to_configuration_object().
     '''
     schema_type = schema.get('type')
     example = schema.get('example')
-    if example is not None:
-        return example
 
-    if schema_type == 'array' or (isinstance(schema_type, list) and 'array' in schema_type):
+    if borgmatic.config.schema.compare_types(schema_type, {'array'}):
         config = ruamel.yaml.comments.CommentedSeq(
-            [schema_to_sample_configuration(schema['items'], level, parent_is_sequence=True)]
+            example
+            if borgmatic.config.schema.compare_types(
+                schema['items'].get('type'), SCALAR_SCHEMA_TYPES
+            )
+            else [
+                schema_to_sample_configuration(
+                    schema['items'], source_config, level, parent_is_sequence=True
+                )
+            ]
         )
         add_comments_to_configuration_sequence(config, schema, indent=(level * INDENT))
-    elif schema_type == 'object' or (isinstance(schema_type, list) and 'object' in schema_type):
-        config = ruamel.yaml.comments.CommentedMap(
-            [
-                (field_name, schema_to_sample_configuration(sub_schema, level + 1))
-                for field_name, sub_schema in get_properties(schema).items()
-            ]
+    elif borgmatic.config.schema.compare_types(schema_type, {'object'}):
+        if source_config and isinstance(source_config, list) and isinstance(source_config[0], dict):
+            source_config = dict(collections.ChainMap(*source_config))
+
+        config = (
+            ruamel.yaml.comments.CommentedMap(
+                [
+                    (
+                        field_name,
+                        schema_to_sample_configuration(
+                            sub_schema, (source_config or {}).get(field_name, {}), level + 1
+                        ),
+                    )
+                    for field_name, sub_schema in borgmatic.config.schema.get_properties(
+                        schema
+                    ).items()
+                ]
+            )
+            or example
         )
         indent = (level * INDENT) + (SEQUENCE_INDENT if parent_is_sequence else 0)
         add_comments_to_configuration_object(
-            config, schema, indent=indent, skip_first=parent_is_sequence
+            config, schema, source_config, indent=indent, skip_first=parent_is_sequence
         )
+    elif borgmatic.config.schema.compare_types(schema_type, SCALAR_SCHEMA_TYPES, match=all):
+        return example
     else:
         raise ValueError(f'Schema at level {level} is unsupported: {schema}')
 
@@ -164,7 +179,7 @@ def add_comments_to_configuration_sequence(config, schema, indent=0):
         return
 
     for field_name in config[0].keys():
-        field_schema = get_properties(schema['items']).get(field_name, {})
+        field_schema = borgmatic.config.schema.get_properties(schema['items']).get(field_name, {})
         description = field_schema.get('description')
 
         # No description to use? Skip it.
@@ -178,26 +193,35 @@ def add_comments_to_configuration_sequence(config, schema, indent=0):
         return
 
 
-REQUIRED_KEYS = {'source_directories', 'repositories', 'keep_daily'}
+DEFAULT_KEYS = {'source_directories', 'repositories', 'keep_daily'}
 COMMENTED_OUT_SENTINEL = 'COMMENT_OUT'
 
 
-def add_comments_to_configuration_object(config, schema, indent=0, skip_first=False):
+def add_comments_to_configuration_object(
+    config, schema, source_config=None, indent=0, skip_first=False
+):
     '''
     Using descriptions from a schema as a source, add those descriptions as comments to the given
-    config mapping, before each field. Indent the comment the given number of characters.
+    configuration dict, putting them before each field. Indent the comment the given number of
+    characters.
+
+    And a sentinel for commenting out options that are neither in DEFAULT_KEYS nor the the given
+    source configuration dict. The idea is that any options used in the source configuration should
+    stay active in the generated configuration.
     '''
     for index, field_name in enumerate(config.keys()):
         if skip_first and index == 0:
             continue
 
-        field_schema = get_properties(schema).get(field_name, {})
+        field_schema = borgmatic.config.schema.get_properties(schema).get(field_name, {})
         description = field_schema.get('description', '').strip()
 
-        # If this is an optional key, add an indicator to the comment flagging it to be commented
+        # If this isn't a default key, add an indicator to the comment flagging it to be commented
         # out from the sample configuration. This sentinel is consumed by downstream processing that
         # does the actual commenting out.
-        if field_name not in REQUIRED_KEYS:
+        if field_name not in DEFAULT_KEYS and (
+            source_config is None or field_name not in source_config
+        ):
             description = (
                 '\n'.join((description, COMMENTED_OUT_SENTINEL))
                 if description
@@ -217,21 +241,6 @@ def add_comments_to_configuration_object(config, schema, indent=0, skip_first=Fa
 RUAMEL_YAML_COMMENTS_INDEX = 1
 
 
-def remove_commented_out_sentinel(config, field_name):
-    '''
-    Given a configuration CommentedMap and a top-level field name in it, remove any "commented out"
-    sentinel found at the end of its YAML comments. This prevents the given field name from getting
-    commented out by downstream processing that consumes the sentinel.
-    '''
-    try:
-        last_comment_value = config.ca.items[field_name][RUAMEL_YAML_COMMENTS_INDEX][-1].value
-    except KeyError:
-        return
-
-    if last_comment_value == f'# {COMMENTED_OUT_SENTINEL}\n':
-        config.ca.items[field_name][RUAMEL_YAML_COMMENTS_INDEX].pop()
-
-
 def merge_source_configuration_into_destination(destination_config, source_config):
     '''
     Deep merge the given source configuration dict into the destination configuration CommentedMap,
@@ -246,12 +255,6 @@ def merge_source_configuration_into_destination(destination_config, source_confi
         return source_config
 
     for field_name, source_value in source_config.items():
-        # Since this key/value is from the source configuration, leave it uncommented and remove any
-        # sentinel that would cause it to get commented out.
-        remove_commented_out_sentinel(
-            ruamel.yaml.comments.CommentedMap(destination_config), field_name
-        )
-
         # This is a mapping. Recurse for this key/value.
         if isinstance(source_value, collections.abc.Mapping):
             destination_config[field_name] = merge_source_configuration_into_destination(
@@ -297,7 +300,7 @@ def generate_sample_configuration(
         normalize.normalize(source_filename, source_config)
 
     destination_config = merge_source_configuration_into_destination(
-        schema_to_sample_configuration(schema), source_config
+        schema_to_sample_configuration(schema, source_config), source_config
     )
 
     if dry_run:

borgmatic/config/load.py

@@ -69,7 +69,7 @@ def include_configuration(loader, filename_node, include_directory, config_paths
         ]
 
     raise ValueError(
-        '!include value is not supported; use a single filename or a list of filenames'
+        'The value given for the !include tag is invalid; use a single filename or a list of filenames instead'
     )
 
 

borgmatic/config/normalize.py

@@ -58,6 +58,90 @@ def normalize_sections(config_filename, config):
     return []
 
 
+def make_command_hook_deprecation_log(config_filename, option_name):  # pragma: no cover
+    '''
+    Given a configuration filename and the name of a configuration option, return a deprecation
+    warning log for it.
+    '''
+    return logging.makeLogRecord(
+        dict(
+            levelno=logging.WARNING,
+            levelname='WARNING',
+            msg=f'{config_filename}: {option_name} is deprecated and support will be removed from a future release. Use commands: instead.',
+        )
+    )
+
+
+def normalize_commands(config_filename, config):
+    '''
+    Given a configuration filename and a configuration dict, transform any "before_*"- and
+    "after_*"-style command hooks into "commands:".
+    '''
+    logs = []
+
+    # Normalize "before_actions" and "after_actions".
+    for preposition in ('before', 'after'):
+        option_name = f'{preposition}_actions'
+        commands = config.pop(option_name, None)
+
+        if commands:
+            logs.append(make_command_hook_deprecation_log(config_filename, option_name))
+            config.setdefault('commands', []).append(
+                {
+                    preposition: 'repository',
+                    'run': commands,
+                }
+            )
+
+    # Normalize "before_backup", "before_prune", "after_backup", "after_prune", etc.
+    for action_name in ('create', 'prune', 'compact', 'check', 'extract'):
+        for preposition in ('before', 'after'):
+            option_name = f'{preposition}_{"backup" if action_name == "create" else action_name}'
+            commands = config.pop(option_name, None)
+
+            if not commands:
+                continue
+
+            logs.append(make_command_hook_deprecation_log(config_filename, option_name))
+            config.setdefault('commands', []).append(
+                {
+                    preposition: 'action',
+                    'when': [action_name],
+                    'run': commands,
+                }
+            )
+
+    # Normalize "on_error".
+    commands = config.pop('on_error', None)
+
+    if commands:
+        logs.append(make_command_hook_deprecation_log(config_filename, 'on_error'))
+        config.setdefault('commands', []).append(
+            {
+                'after': 'error',
+                'when': ['create', 'prune', 'compact', 'check'],
+                'run': commands,
+            }
+        )
+
+    # Normalize "before_everything" and "after_everything".
+    for preposition in ('before', 'after'):
+        option_name = f'{preposition}_everything'
+        commands = config.pop(option_name, None)
+
+        if commands:
+            logs.append(make_command_hook_deprecation_log(config_filename, option_name))
+            config.setdefault('commands', []).append(
+                {
+                    preposition: 'everything',
+                    'when': ['create'],
+                    'run': commands,
+                }
+            )
+
+    return logs
+
+
 def normalize(config_filename, config):
     '''
     Given a configuration filename and a configuration dict of its loaded contents, apply particular
@@ -67,6 +151,7 @@ def normalize(config_filename, config):
     Raise ValueError the configuration cannot be normalized.
     '''
     logs = normalize_sections(config_filename, config)
+    logs += normalize_commands(config_filename, config)
 
     if config.get('borgmatic_source_directory'):
         logs.append(
@@ -241,7 +326,11 @@ def normalize(config_filename, config):
         config['repositories'] = []
 
         for repository_dict in repositories:
-            repository_path = repository_dict['path']
+            repository_path = repository_dict.get('path')
+
+            if repository_path is None:
+                continue
+
             if '~' in repository_path:
                 logs.append(
                     logging.makeLogRecord(

borgmatic/config/override.py

@@ -1,7 +1,10 @@
 import io
+import logging
 
 import ruamel.yaml
 
+logger = logging.getLogger(__name__)
+
 
 def set_values(config, keys, value):
     '''
@@ -134,6 +137,11 @@ def apply_overrides(config, schema, raw_overrides):
     '''
     overrides = parse_overrides(raw_overrides, schema)
 
+    if overrides:
+        logger.warning(
+            "The --override flag is deprecated and will be removed from a future release. Instead, use a command-line flag corresponding to the configuration option you'd like to set."
+        )
+
     for keys, value in overrides:
         set_values(config, keys, value)
         set_values(config, strip_section_names(keys), value)

borgmatic/config/paths.py

@@ -76,14 +76,13 @@ class Runtime_directory:
     automatically gets cleaned up as necessary.
     '''
 
-    def __init__(self, config, log_prefix):
+    def __init__(self, config):
         '''
-        Given a configuration dict and a log prefix, determine the borgmatic runtime directory,
-        creating a secure, temporary directory within it if necessary. Defaults to
-        $XDG_RUNTIME_DIR/./borgmatic or $RUNTIME_DIRECTORY/./borgmatic or
-        $TMPDIR/borgmatic-[random]/./borgmatic or $TEMP/borgmatic-[random]/./borgmatic or
-        /tmp/borgmatic-[random]/./borgmatic where "[random]" is a randomly generated string intended
-        to avoid path collisions.
+        Given a configuration dict determine the borgmatic runtime directory, creating a secure,
+        temporary directory within it if necessary. Defaults to $XDG_RUNTIME_DIR/./borgmatic or
+        $RUNTIME_DIRECTORY/./borgmatic or $TMPDIR/borgmatic-[random]/./borgmatic or
+        $TEMP/borgmatic-[random]/./borgmatic or /tmp/borgmatic-[random]/./borgmatic where "[random]"
+        is a randomly generated string intended to avoid path collisions.
 
         If XDG_RUNTIME_DIR or RUNTIME_DIRECTORY is set and already ends in "/borgmatic", then don't
         tack on a second "/borgmatic" path component.
@@ -127,7 +126,7 @@ class Runtime_directory:
         )
         os.makedirs(self.runtime_path, mode=0o700, exist_ok=True)
 
-        logger.debug(f'{log_prefix}: Using runtime directory {os.path.normpath(self.runtime_path)}')
+        logger.debug(f'Using runtime directory {os.path.normpath(self.runtime_path)}')
 
     def __enter__(self):
         '''
@@ -135,7 +134,7 @@ class Runtime_directory:
         '''
         return self.runtime_path
 
-    def __exit__(self, exception, value, traceback):
+    def __exit__(self, exception_type, exception, traceback):
         '''
         Delete any temporary directory that was created as part of initialization.
         '''

borgmatic/config/schema.py

@@ -0,0 +1,72 @@
+import decimal
+import itertools
+
+
+def get_properties(schema):
+    '''
+    Given a schema dict, return its properties. But if it's got sub-schemas with multiple different
+    potential properties, return their merged properties instead (interleaved so the first
+    properties of each sub-schema come first). The idea is that the user should see all possible
+    options even if they're not all possible together.
+    '''
+    if 'oneOf' in schema:
+        return dict(
+            item
+            for item in itertools.chain(
+                *itertools.zip_longest(
+                    *[sub_schema['properties'].items() for sub_schema in schema['oneOf']]
+                )
+            )
+            if item is not None
+        )
+
+    return schema.get('properties', {})
+
+
+SCHEMA_TYPE_TO_PYTHON_TYPE = {
+    'array': list,
+    'boolean': bool,
+    'integer': int,
+    'number': decimal.Decimal,
+    'object': dict,
+    'string': str,
+}
+
+
+def parse_type(schema_type, **overrides):
+    '''
+    Given a schema type as a string, return the corresponding Python type.
+
+    If any overrides are given in the from of a schema type string to a Python type, then override
+    the default type mapping with them.
+
+    Raise ValueError if the schema type is unknown.
+    '''
+    try:
+        return dict(
+            SCHEMA_TYPE_TO_PYTHON_TYPE,
+            **overrides,
+        )[schema_type]
+    except KeyError:
+        raise ValueError(f'Unknown type in configuration schema: {schema_type}')
+
+
+def compare_types(schema_type, target_types, match=any):
+    '''
+    Given a schema type as a string or a list of strings (representing multiple types) and a set of
+    target type strings, return whether every schema type is in the set of target types.
+
+    If the schema type is a list of strings, use the given match function (such as any or all) to
+    compare elements. For instance, if match is given as all, then every element of the schema_type
+    list must be in the target types.
+    '''
+    if isinstance(schema_type, list):
+        if match(element_schema_type in target_types for element_schema_type in schema_type):
+            return True
+
+        return False
+
+    if schema_type in target_types:
+        return True
+
+    return False

borgmatic/config/validate.py

@@ -4,7 +4,7 @@ import os
 import jsonschema
 import ruamel.yaml
 
-import borgmatic.config
+import borgmatic.config.arguments
 from borgmatic.config import constants, environment, load, normalize, override
 
 
@@ -21,6 +21,18 @@ def schema_filename():
         return schema_path
 
 
+def load_schema(schema_path):  # pragma: no cover
+    '''
+    Given a schema filename path, load the schema and return it as a dict.
+
+    Raise Validation_error if the schema could not be parsed.
+    '''
+    try:
+        return load.load_configuration(schema_path)
+    except (ruamel.yaml.error.YAMLError, RecursionError) as error:
+        raise Validation_error(schema_path, (str(error),))
+
+
 def format_json_error_path_element(path_element):
     '''
     Given a path element into a JSON data structure, format it for display as a string.
@@ -84,12 +96,17 @@ def apply_logical_validation(config_filename, parsed_configuration):
             )
 
 
-def parse_configuration(config_filename, schema_filename, overrides=None, resolve_env=True):
+def parse_configuration(
+    config_filename, schema_filename, arguments, overrides=None, resolve_env=True
+):
     '''
     Given the path to a config filename in YAML format, the path to a schema filename in a YAML
-    rendition of JSON Schema format, a sequence of configuration file override strings in the form
-    of "option.suboption=value", return the parsed configuration as a data structure of nested dicts
-    and lists corresponding to the schema. Example return value:
+    rendition of JSON Schema format, arguments as dict from action name to argparse.Namespace, a
+    sequence of configuration file override strings in the form of "option.suboption=value", and
+    whether to resolve environment variables, return the parsed configuration as a data structure of
+    nested dicts and lists corresponding to the schema. Example return value.
+
+    Example return value:
 
         {
             'source_directories': ['/home', '/etc'],
@@ -112,6 +129,7 @@ def parse_configuration(config_filename, schema_filename, overrides=None, resolv
     except (ruamel.yaml.error.YAMLError, RecursionError) as error:
         raise Validation_error(config_filename, (str(error),))
 
+    borgmatic.config.arguments.apply_arguments_to_config(config, schema, arguments)
     override.apply_overrides(config, schema, overrides)
     constants.apply_constants(config, config.get('constants') if config else {})
 
@@ -124,6 +142,7 @@ def parse_configuration(config_filename, schema_filename, overrides=None, resolv
         validator = jsonschema.Draft7Validator(schema)
     except AttributeError:  # pragma: no cover
         validator = jsonschema.Draft4Validator(schema)
+
     validation_errors = tuple(validator.iter_errors(config))
 
     if validation_errors:
@@ -136,16 +155,22 @@ def parse_configuration(config_filename, schema_filename, overrides=None, resolv
     return config, config_paths, logs
 
 
-def normalize_repository_path(repository):
+def normalize_repository_path(repository, base=None):
     '''
     Given a repository path, return the absolute path of it (for local repositories).
+    Optionally, use a base path for resolving relative paths, e.g. to the configured working directory.
     '''
     # A colon in the repository could mean that it's either a file:// URL or a remote repository.
     # If it's a remote repository, we don't want to normalize it. If it's a file:// URL, we do.
     if ':' not in repository:
-        return os.path.abspath(repository)
+        return (
+            os.path.abspath(os.path.join(base, repository)) if base else os.path.abspath(repository)
+        )
     elif repository.startswith('file://'):
-        return os.path.abspath(repository.partition('file://')[-1])
+        local_path = repository.partition('file://')[-1]
+        return (
+            os.path.abspath(os.path.join(base, local_path)) if base else os.path.abspath(local_path)
+        )
     else:
         return repository
 

borgmatic/execute.py

@@ -1,11 +1,12 @@
 import collections
 import enum
 import logging
-import os
 import select
 import subprocess
 import textwrap
 
+import borgmatic.logger
+
 logger = logging.getLogger(__name__)
 
 
@@ -241,6 +242,9 @@ def mask_command_secrets(full_command):
 MAX_LOGGED_COMMAND_LENGTH = 1000
 
 
+PREFIXES_OF_ENVIRONMENT_VARIABLES_TO_LOG = ('BORG_', 'PG', 'MARIADB_', 'MYSQL_')
+
+
 def log_command(full_command, input_file=None, output_file=None, environment=None):
     '''
     Log the given command (a sequence of command/argument strings), along with its input/output file
@@ -249,14 +253,21 @@ def log_command(full_command, input_file=None, output_file=None, environment=Non
     logger.debug(
         textwrap.shorten(
             ' '.join(
-                tuple(f'{key}=***' for key in (environment or {}).keys())
+                tuple(
+                    f'{key}=***'
+                    for key in (environment or {}).keys()
+                    if any(
+                        key.startswith(prefix)
+                        for prefix in PREFIXES_OF_ENVIRONMENT_VARIABLES_TO_LOG
+                    )
+                )
                 + mask_command_secrets(full_command)
             ),
             width=MAX_LOGGED_COMMAND_LENGTH,
             placeholder=' ...',
         )
-        + (f" < {getattr(input_file, 'name', '')}" if input_file else '')
-        + (f" > {getattr(output_file, 'name', '')}" if output_file else '')
+        + (f" < {getattr(input_file, 'name', input_file)}" if input_file else '')
+        + (f" > {getattr(output_file, 'name', output_file)}" if output_file else '')
     )
 
 
@@ -272,7 +283,7 @@ def execute_command(
     output_file=None,
     input_file=None,
     shell=False,
-    extra_environment=None,
+    environment=None,
     working_directory=None,
     borg_local_path=None,
     borg_exit_codes=None,
@@ -282,18 +293,17 @@ def execute_command(
     Execute the given command (a sequence of command/argument strings) and log its output at the
     given log level. If an open output file object is given, then write stdout to the file and only
     log stderr. If an open input file object is given, then read stdin from the file. If shell is
-    True, execute the command within a shell. If an extra environment dict is given, then use it to
-    augment the current environment, and pass the result into the command. If a working directory is
-    given, use that as the present working directory when running the command. If a Borg local path
-    is given, and the command matches it (regardless of arguments), treat exit code 1 as a warning
-    instead of an error. But if Borg exit codes are given as a sequence of exit code configuration
-    dicts, then use that configuration to decide what's an error and what's a warning. If run to
-    completion is False, then return the process for the command without executing it to completion.
+    True, execute the command within a shell. If an environment variables dict is given, then pass
+    it into the command. If a working directory is given, use that as the present working directory
+    when running the command. If a Borg local path is given, and the command matches it (regardless
+    of arguments), treat exit code 1 as a warning instead of an error. But if Borg exit codes are
+    given as a sequence of exit code configuration dicts, then use that configuration to decide
+    what's an error and what's a warning. If run to completion is False, then return the process for
+    the command without executing it to completion.
 
     Raise subprocesses.CalledProcessError if an error occurs while running the command.
     '''
-    log_command(full_command, input_file, output_file, extra_environment)
-    environment = {**os.environ, **extra_environment} if extra_environment else None
+    log_command(full_command, input_file, output_file, environment)
     do_not_capture = bool(output_file is DO_NOT_CAPTURE)
     command = ' '.join(full_command) if shell else full_command
 
@@ -305,52 +315,58 @@ def execute_command(
         shell=shell,
         env=environment,
         cwd=working_directory,
+        # Necessary for passing credentials via anonymous pipe.
+        close_fds=False,
     )
     if not run_to_completion:
         return process
 
-    log_outputs(
-        (process,),
-        (input_file, output_file),
-        output_log_level,
-        borg_local_path,
-        borg_exit_codes,
-    )
+    with borgmatic.logger.Log_prefix(None):  # Log command output without any prefix.
+        log_outputs(
+            (process,),
+            (input_file, output_file),
+            output_log_level,
+            borg_local_path,
+            borg_exit_codes,
+        )
 
 
 def execute_command_and_capture_output(
     full_command,
+    input_file=None,
     capture_stderr=False,
     shell=False,
-    extra_environment=None,
+    environment=None,
     working_directory=None,
     borg_local_path=None,
     borg_exit_codes=None,
 ):
     '''
     Execute the given command (a sequence of command/argument strings), capturing and returning its
-    output (stdout). If capture stderr is True, then capture and return stderr in addition to
-    stdout. If shell is True, execute the command within a shell. If an extra environment dict is
-    given, then use it to augment the current environment, and pass the result into the command. If
-    a working directory is given, use that as the present working directory when running the
-    command. If a Borg local path is given, and the command matches it (regardless of arguments),
-    treat exit code 1 as a warning instead of an error. But if Borg exit codes are given as a
-    sequence of exit code configuration dicts, then use that configuration to decide what's an error
-    and what's a warning.
+    output (stdout). If an input file descriptor is given, then pipe it to the command's stdin. If
+    capture stderr is True, then capture and return stderr in addition to stdout. If shell is True,
+    execute the command within a shell. If an environment variables dict is given, then pass it into
+    the command. If a working directory is given, use that as the present working directory when
+    running the command. If a Borg local path is given, and the command matches it (regardless of
+    arguments), treat exit code 1 as a warning instead of an error. But if Borg exit codes are given
+    as a sequence of exit code configuration dicts, then use that configuration to decide what's an
+    error and what's a warning.
 
     Raise subprocesses.CalledProcessError if an error occurs while running the command.
     '''
-    log_command(full_command, environment=extra_environment)
-    environment = {**os.environ, **extra_environment} if extra_environment else None
+    log_command(full_command, input_file, environment=environment)
     command = ' '.join(full_command) if shell else full_command
 
     try:
         output = subprocess.check_output(
             command,
+            stdin=input_file,
             stderr=subprocess.STDOUT if capture_stderr else None,
             shell=shell,
             env=environment,
             cwd=working_directory,
+            # Necessary for passing credentials via anonymous pipe.
+            close_fds=False,
         )
     except subprocess.CalledProcessError as error:
         if (
@@ -370,7 +386,7 @@ def execute_command_with_processes(
     output_file=None,
     input_file=None,
     shell=False,
-    extra_environment=None,
+    environment=None,
     working_directory=None,
     borg_local_path=None,
     borg_exit_codes=None,
@@ -384,19 +400,17 @@ def execute_command_with_processes(
     If an open output file object is given, then write stdout to the file and only log stderr. But
     if output log level is None, instead suppress logging and return the captured output for (only)
     the given command. If an open input file object is given, then read stdin from the file. If
-    shell is True, execute the command within a shell. If an extra environment dict is given, then
-    use it to augment the current environment, and pass the result into the command. If a working
-    directory is given, use that as the present working directory when running the command. If a
-    Borg local path is given, then for any matching command or process (regardless of arguments),
-    treat exit code 1 as a warning instead of an error. But if Borg exit codes are given as a
-    sequence of exit code configuration dicts, then use that configuration to decide what's an error
-    and what's a warning.
+    shell is True, execute the command within a shell. If an environment variables dict is given,
+    then pass it into the command. If a working directory is given, use that as the present working
+    directory when running the command. If a Borg local path is given, then for any matching command
+    or process (regardless of arguments), treat exit code 1 as a warning instead of an error. But if
+    Borg exit codes are given as a sequence of exit code configuration dicts, then use that
+    configuration to decide what's an error and what's a warning.
 
     Raise subprocesses.CalledProcessError if an error occurs while running the command or in the
     upstream process.
     '''
-    log_command(full_command, input_file, output_file, extra_environment)
-    environment = {**os.environ, **extra_environment} if extra_environment else None
+    log_command(full_command, input_file, output_file, environment)
     do_not_capture = bool(output_file is DO_NOT_CAPTURE)
     command = ' '.join(full_command) if shell else full_command
 
@@ -411,6 +425,8 @@ def execute_command_with_processes(
             shell=shell,
             env=environment,
             cwd=working_directory,
+            # Necessary for passing credentials via anonymous pipe.
+            close_fds=False,
         )
     except (subprocess.CalledProcessError, OSError):
         # Something has gone wrong. So vent each process' output buffer to prevent it from hanging.
@@ -421,13 +437,14 @@ def execute_command_with_processes(
                 process.kill()
         raise
 
-    captured_outputs = log_outputs(
-        tuple(processes) + (command_process,),
-        (input_file, output_file),
-        output_log_level,
-        borg_local_path,
-        borg_exit_codes,
-    )
+    with borgmatic.logger.Log_prefix(None):  # Log command output without any prefix.
+        captured_outputs = log_outputs(
+            tuple(processes) + (command_process,),
+            (input_file, output_file),
+            output_log_level,
+            borg_local_path,
+            borg_exit_codes,
+        )
 
     if output_log_level is None:
         return captured_outputs.get(command_process)

borgmatic/hooks/command.py

@@ -1,18 +1,34 @@
+import functools
 import logging
 import os
 import re
 import shlex
+import subprocess
 import sys
 
 import borgmatic.execute
+import borgmatic.logger
 
 logger = logging.getLogger(__name__)
 
 
 SOFT_FAIL_EXIT_CODE = 75
+BORG_PLACEHOLDERS = {
+    '{hostname}',
+    '{fqdn}',
+    '{reverse-fqdn}',
+    '{now}',
+    '{utcnow}',
+    '{user}',
+    '{pid}',
+    '{borgversion}',
+    '{borgmajor}',
+    '{borgminor}',
+    '{borgpatch}',
+}
 
 
-def interpolate_context(config_filename, hook_description, command, context):
+def interpolate_context(hook_description, command, context):
     '''
     Given a config filename, a hook description, a single hook command, and a dict of context
     names/values, interpolate the values by "{name}" into the command and return the result.
@@ -20,85 +36,226 @@ def interpolate_context(config_filename, hook_description, command, context):
     for name, value in context.items():
         command = command.replace(f'{{{name}}}', shlex.quote(str(value)))
 
-    for unsupported_variable in re.findall(r'{\w+}', command):
-        logger.warning(
-            f"{config_filename}: Variable '{unsupported_variable}' is not supported in {hook_description} hook"
-        )
+    for unsupported_variable in re.findall(r'\{\w+\}', command):
+        # Warn about variables unknown to borgmatic, but don't warn if the variable name happens to
+        # be a Borg placeholder, as Borg should hopefully consume it.
+        if unsupported_variable not in BORG_PLACEHOLDERS:
+            logger.warning(
+                f'Variable "{unsupported_variable}" is not supported in the {hook_description} hook'
+            )
 
     return command
 
 
 def make_environment(current_environment, sys_module=sys):
     '''
-    Given the existing system environment as a map from environment variable name to value, return
-    (in the same form) any extra environment variables that should be used when running command
-    hooks.
+    Given the existing system environment as a map from environment variable name to value, return a
+    copy of it, augmented with any extra environment variables that should be used when running
+    command hooks.
     '''
+    environment = dict(current_environment)
+
     # Detect whether we're running within a PyInstaller bundle. If so, set or clear LD_LIBRARY_PATH
     # based on the value of LD_LIBRARY_PATH_ORIG. This prevents library version information errors.
     if getattr(sys_module, 'frozen', False) and hasattr(sys_module, '_MEIPASS'):
-        return {'LD_LIBRARY_PATH': current_environment.get('LD_LIBRARY_PATH_ORIG', '')}
+        environment['LD_LIBRARY_PATH'] = environment.get('LD_LIBRARY_PATH_ORIG', '')
 
-    return {}
+    return environment
 
 
-def execute_hook(commands, umask, config_filename, description, dry_run, **context):
+def filter_hooks(command_hooks, before=None, after=None, action_names=None, state_names=None):
     '''
-    Given a list of hook commands to execute, a umask to execute with (or None), a config filename,
-    a hook description, and whether this is a dry run, run the given commands. Or, don't run them
-    if this is a dry run.
+    Given a sequence of command hook dicts from configuration and one or more filters (before name,
+    after name, a sequence of action names, and/or a sequence of execution result state names),
+    filter down the command hooks to just the ones that match the given filters.
+    '''
+    return tuple(
+        hook_config
+        for hook_config in command_hooks or ()
+        for config_action_names in (hook_config.get('when'),)
+        for config_state_names in (hook_config.get('states'),)
+        if before is None or hook_config.get('before') == before
+        if after is None or hook_config.get('after') == after
+        if action_names is None
+        or config_action_names is None
+        or set(config_action_names or ()).intersection(set(action_names))
+        if state_names is None
+        or config_state_names is None
+        or set(config_state_names or ()).intersection(set(state_names))
+    )
+
+
+def execute_hooks(command_hooks, umask, working_directory, dry_run, **context):
+    '''
+    Given a sequence of command hook dicts from configuration, a umask to execute with (or None), a
+    working directory to execute with, and whether this is a dry run, run the commands for each
+    hook. Or don't run them if this is a dry run.
 
     The context contains optional values interpolated by name into the hook commands.
 
-    Raise ValueError if the umask cannot be parsed.
+    Raise ValueError if the umask cannot be parsed or a hook is invalid.
     Raise subprocesses.CalledProcessError if an error occurs in a hook.
     '''
-    if not commands:
-        logger.debug(f'{config_filename}: No commands to run for {description} hook')
-        return
+    borgmatic.logger.add_custom_log_levels()
 
     dry_run_label = ' (dry run; not actually running hooks)' if dry_run else ''
 
-    context['configuration_filename'] = config_filename
-    commands = [
-        interpolate_context(config_filename, description, command, context) for command in commands
-    ]
-
-    if len(commands) == 1:
-        logger.info(f'{config_filename}: Running command for {description} hook{dry_run_label}')
-    else:
-        logger.info(
-            f'{config_filename}: Running {len(commands)} commands for {description} hook{dry_run_label}',
+    for hook_config in command_hooks:
+        commands = hook_config.get('run')
+        when_description = (
+            f"{'/'.join(hook_config.get('when'))} " if hook_config.get('when') else ''
         )
 
-    if umask:
-        parsed_umask = int(str(umask), 8)
-        logger.debug(f'{config_filename}: Set hook umask to {oct(parsed_umask)}')
-        original_umask = os.umask(parsed_umask)
-    else:
-        original_umask = None
+        if 'before' in hook_config:
+            description = f'before {when_description}{hook_config.get("before")}'
+        elif 'after' in hook_config:
+            description = f'after {when_description}{hook_config.get("after")}'
+        else:
+            raise ValueError(f'Invalid hook configuration: {hook_config}')
 
-    try:
-        for command in commands:
-            if dry_run:
-                continue
+        if not commands:
+            logger.debug(f'No commands to run for {description} hook')
+            continue
 
-            borgmatic.execute.execute_command(
-                [command],
-                output_log_level=(logging.ERROR if description == 'on-error' else logging.WARNING),
-                shell=True,
-                extra_environment=make_environment(os.environ),
+        commands = [interpolate_context(description, command, context) for command in commands]
+
+        if len(commands) == 1:
+            logger.info(f'Running {description} command hook{dry_run_label}')
+        else:
+            logger.info(
+                f'Running {len(commands)} commands for {description} hook{dry_run_label}',
             )
-    finally:
-        if original_umask:
-            os.umask(original_umask)
+
+        if umask:
+            parsed_umask = int(str(umask), 8)
+            logger.debug(f'Setting hook umask to {oct(parsed_umask)}')
+            original_umask = os.umask(parsed_umask)
+        else:
+            original_umask = None
+
+        try:
+            for command in commands:
+                if dry_run:
+                    continue
+
+                borgmatic.execute.execute_command(
+                    [command],
+                    output_log_level=(
+                        logging.ERROR if hook_config.get('after') == 'error' else logging.ANSWER
+                    ),
+                    shell=True,
+                    environment=make_environment(os.environ),
+                    working_directory=working_directory,
+                )
+        finally:
+            if original_umask:
+                os.umask(original_umask)
 
 
-def considered_soft_failure(config_filename, error):
+class Before_after_hooks:
+    '''
+    A Python context manager for executing command hooks both before and after the wrapped code.
+
+    Example use as a context manager:
+
+       with borgmatic.hooks.command.Before_after_hooks(
+           command_hooks=config.get('commands'),
+           before_after='do_stuff',
+           umask=config.get('umask'),
+           dry_run=dry_run,
+           action_names=['create'],
+       ):
+            do()
+            some()
+            stuff()
+
+    With that context manager in place, "before" command hooks execute before the wrapped code runs,
+    and "after" command hooks execute after the wrapped code completes.
+    '''
+
+    def __init__(
+        self,
+        command_hooks,
+        before_after,
+        umask,
+        working_directory,
+        dry_run,
+        action_names=None,
+        **context,
+    ):
+        '''
+        Given a sequence of command hook configuration dicts, the before/after name, a umask to run
+        commands with, a working directory to run commands with, a dry run flag, a sequence of
+        action names, and any context for the executed commands, save those data points for use
+        below.
+        '''
+        self.command_hooks = command_hooks
+        self.before_after = before_after
+        self.umask = umask
+        self.working_directory = working_directory
+        self.dry_run = dry_run
+        self.action_names = action_names
+        self.context = context
+
+    def __enter__(self):
+        '''
+        Run the configured "before" command hooks that match the initialized data points.
+        '''
+        try:
+            execute_hooks(
+                borgmatic.hooks.command.filter_hooks(
+                    self.command_hooks,
+                    before=self.before_after,
+                    action_names=self.action_names,
+                ),
+                self.umask,
+                self.working_directory,
+                self.dry_run,
+                **self.context,
+            )
+        except (OSError, subprocess.CalledProcessError) as error:
+            if considered_soft_failure(error):
+                raise
+
+            # Trigger the after hook manually, since raising here will prevent it from being run
+            # otherwise.
+            self.__exit__(exception_type=type(error), exception=error, traceback=None)
+
+            raise ValueError(f'Error running before {self.before_after} hook: {error}')
+
+    def __exit__(self, exception_type, exception, traceback):
+        '''
+        Run the configured "after" command hooks that match the initialized data points.
+        '''
+        try:
+            execute_hooks(
+                borgmatic.hooks.command.filter_hooks(
+                    self.command_hooks,
+                    after=self.before_after,
+                    action_names=self.action_names,
+                    state_names=['fail' if exception_type else 'finish'],
+                ),
+                self.umask,
+                self.working_directory,
+                self.dry_run,
+                **self.context,
+            )
+        except (OSError, subprocess.CalledProcessError) as error:
+            if considered_soft_failure(error):
+                raise
+
+            raise ValueError(f'Error running after {self.before_after} hook: {error}')
+
+
+@functools.cache
+def considered_soft_failure(error):
     '''
     Given a configuration filename and an exception object, return whether the exception object
     represents a subprocess.CalledProcessError with a return code of SOFT_FAIL_EXIT_CODE. If so,
     that indicates that the error is a "soft failure", and should not result in an error.
+
+    The results of this function are cached so that it can be called multiple times without logging
+    multiple times.
     '''
     exit_code = getattr(error, 'returncode', None)
     if exit_code is None:
@@ -106,7 +263,7 @@ def considered_soft_failure(config_filename, error):
 
     if exit_code == SOFT_FAIL_EXIT_CODE:
         logger.info(
-            f'{config_filename}: Command hook exited with soft failure exit code ({SOFT_FAIL_EXIT_CODE}); skipping remaining repository actions',
+            f'Command hook exited with soft failure exit code ({SOFT_FAIL_EXIT_CODE}); skipping remaining repository actions',
         )
         return True
 

borgmatic/hooks/credential/container.py

@@ -0,0 +1,43 @@
+import logging
+import os
+import re
+
+logger = logging.getLogger(__name__)
+
+
+SECRET_NAME_PATTERN = re.compile(r'^\w+$')
+DEFAULT_SECRETS_DIRECTORY = '/run/secrets'
+
+
+def load_credential(hook_config, config, credential_parameters):
+    '''
+    Given the hook configuration dict, the configuration dict, and a credential parameters tuple
+    containing a secret name to load, read the secret from the corresponding container secrets file
+    and return it.
+
+    Raise ValueError if the credential parameters is not one element, the secret name is invalid, or
+    the secret file cannot be read.
+    '''
+    try:
+        (secret_name,) = credential_parameters
+    except ValueError:
+        name = ' '.join(credential_parameters)
+
+        raise ValueError(f'Cannot load invalid secret name: "{name}"')
+
+    if not SECRET_NAME_PATTERN.match(secret_name):
+        raise ValueError(f'Cannot load invalid secret name: "{secret_name}"')
+
+    try:
+        with open(
+            os.path.join(
+                config.get('working_directory', ''),
+                (hook_config or {}).get('secrets_directory', DEFAULT_SECRETS_DIRECTORY),
+                secret_name,
+            )
+        ) as secret_file:
+            return secret_file.read().rstrip(os.linesep)
+    except (FileNotFoundError, OSError) as error:
+        logger.warning(error)
+
+        raise ValueError(f'Cannot load secret "{secret_name}" from file: {error.filename}')

borgmatic/hooks/credential/file.py

@@ -0,0 +1,32 @@
+import logging
+import os
+
+logger = logging.getLogger(__name__)
+
+
+def load_credential(hook_config, config, credential_parameters):
+    '''
+    Given the hook configuration dict, the configuration dict, and a credential parameters tuple
+    containing a credential path to load, load the credential from file and return it.
+
+    Raise ValueError if the credential parameters is not one element or the secret file cannot be
+    read.
+    '''
+    try:
+        (credential_path,) = credential_parameters
+    except ValueError:
+        name = ' '.join(credential_parameters)
+
+        raise ValueError(f'Cannot load invalid credential: "{name}"')
+
+    expanded_credential_path = os.path.expanduser(credential_path)
+
+    try:
+        with open(
+            os.path.join(config.get('working_directory', ''), expanded_credential_path)
+        ) as credential_file:
+            return credential_file.read().rstrip(os.linesep)
+    except (FileNotFoundError, OSError) as error:
+        logger.warning(error)
+
+        raise ValueError(f'Cannot load credential file: {error.filename}')

borgmatic/hooks/credential/keepassxc.py

@@ -0,0 +1,45 @@
+import logging
+import os
+import shlex
+
+import borgmatic.execute
+
+logger = logging.getLogger(__name__)
+
+
+def load_credential(hook_config, config, credential_parameters):
+    '''
+    Given the hook configuration dict, the configuration dict, and a credential parameters tuple
+    containing a KeePassXC database path and an attribute name to load, run keepassxc-cli to fetch
+    the corresponding KeePassXC credential and return it.
+
+    Raise ValueError if keepassxc-cli can't retrieve the credential.
+    '''
+    try:
+        (database_path, attribute_name) = credential_parameters
+    except ValueError:
+        raise ValueError(f'Invalid KeePassXC credential parameters: {credential_parameters}')
+
+    expanded_database_path = os.path.expanduser(database_path)
+
+    if not os.path.exists(expanded_database_path):
+        raise ValueError(f'KeePassXC database path does not exist: {database_path}')
+
+    # Build the keepassxc-cli command.
+    command = (
+        tuple(shlex.split((hook_config or {}).get('keepassxc_cli_command', 'keepassxc-cli')))
+        + ('show', '--show-protected', '--attributes', 'Password')
+        + (
+            ('--key-file', hook_config['key_file'])
+            if hook_config and hook_config.get('key_file')
+            else ()
+        )
+        + (
+            ('--yubikey', hook_config['yubikey'])
+            if hook_config and hook_config.get('yubikey')
+            else ()
+        )
+        + (expanded_database_path, attribute_name)  # Ensure database and entry are last.
+    )
+
+    return borgmatic.execute.execute_command_and_capture_output(command).rstrip(os.linesep)

borgmatic/hooks/credential/parse.py

@@ -0,0 +1,124 @@
+import functools
+import re
+import shlex
+
+import borgmatic.hooks.dispatch
+
+IS_A_HOOK = False
+
+
+class Hash_adapter:
+    '''
+    A Hash_adapter instance wraps an unhashable object and pretends it's hashable. This is intended
+    for passing to a @functools.cache-decorated function to prevent it from complaining that an
+    argument is unhashable. It should only be used for arguments that you don't want to actually
+    impact the cache hashing, because Hash_adapter doesn't actually hash the object's contents.
+
+    Example usage:
+
+        @functools.cache
+        def func(a, b):
+            print(a, b.actual_value)
+            return a
+
+        func(5, Hash_adapter({1: 2, 3: 4}))  # Calls func(), prints, and returns.
+        func(5, Hash_adapter({1: 2, 3: 4}))  # Hits the cache and just returns the value.
+        func(5, Hash_adapter({5: 6, 7: 8}))  # Also uses cache, since the Hash_adapter is ignored.
+
+    In the above function, the "b" value is one that has been wrapped with Hash_adappter, and
+    therefore "b.actual_value" is necessary to access the original value.
+    '''
+
+    def __init__(self, actual_value):
+        self.actual_value = actual_value
+
+    def __eq__(self, other):
+        return True
+
+    def __hash__(self):
+        return 0
+
+
+UNHASHABLE_TYPES = (dict, list, set)
+
+
+def cache_ignoring_unhashable_arguments(function):
+    '''
+    A function decorator that caches calls to the decorated function but ignores any unhashable
+    arguments when performing cache lookups. This is intended to be a drop-in replacement for
+    functools.cache.
+
+    Example usage:
+
+        @cache_ignoring_unhashable_arguments
+        def func(a, b):
+            print(a, b)
+            return a
+
+        func(5, {1: 2, 3: 4})  # Calls func(), prints, and returns.
+        func(5, {1: 2, 3: 4})  # Hits the cache and just returns the value.
+        func(5, {5: 6, 7: 8})  # Also uses cache, since the unhashable value (the dict) is ignored.
+    '''
+
+    @functools.cache
+    def cached_function(*args, **kwargs):
+        return function(
+            *(arg.actual_value if isinstance(arg, Hash_adapter) else arg for arg in args),
+            **{
+                key: value.actual_value if isinstance(value, Hash_adapter) else value
+                for (key, value) in kwargs.items()
+            },
+        )
+
+    @functools.wraps(function)
+    def wrapper_function(*args, **kwargs):
+        return cached_function(
+            *(Hash_adapter(arg) if isinstance(arg, UNHASHABLE_TYPES) else arg for arg in args),
+            **{
+                key: Hash_adapter(value) if isinstance(value, UNHASHABLE_TYPES) else value
+                for (key, value) in kwargs.items()
+            },
+        )
+
+    wrapper_function.cache_clear = cached_function.cache_clear
+
+    return wrapper_function
+
+
+CREDENTIAL_PATTERN = re.compile(r'\{credential( +(?P<hook_and_parameters>.*))?\}')
+
+
+@cache_ignoring_unhashable_arguments
+def resolve_credential(value, config):
+    '''
+    Given a configuration value containing a string like "{credential hookname credentialname}" and
+    a configuration dict, resolve the credential by calling the relevant hook to get the actual
+    credential value. If the given value does not actually contain a credential tag, then return it
+    unchanged.
+
+    Cache the value (ignoring the config for purposes of caching), so repeated calls to this
+    function don't need to load the credential repeatedly.
+
+    Raise ValueError if the config could not be parsed or the credential could not be loaded.
+    '''
+    if value is None:
+        return value
+
+    matcher = CREDENTIAL_PATTERN.match(value)
+
+    if not matcher:
+        return value
+
+    hook_and_parameters = matcher.group('hook_and_parameters')
+
+    if not hook_and_parameters:
+        raise ValueError(f'Cannot load credential with invalid syntax "{value}"')
+
+    (hook_name, *credential_parameters) = shlex.split(hook_and_parameters)
+
+    if not credential_parameters:
+        raise ValueError(f'Cannot load credential with invalid syntax "{value}"')
+
+    return borgmatic.hooks.dispatch.call_hook(
+        'load_credential', config, hook_name, tuple(credential_parameters)
+    )

borgmatic/hooks/credential/systemd.py

@@ -0,0 +1,43 @@
+import logging
+import os
+import re
+
+logger = logging.getLogger(__name__)
+
+
+CREDENTIAL_NAME_PATTERN = re.compile(r'^[\w.-]+$')
+
+
+def load_credential(hook_config, config, credential_parameters):
+    '''
+    Given the hook configuration dict, the configuration dict, and a credential parameters tuple
+    containing a credential name to load, read the credential from the corresponding systemd
+    credential file and return it.
+
+    Raise ValueError if the systemd CREDENTIALS_DIRECTORY environment variable is not set, the
+    credential name is invalid, or the credential file cannot be read.
+    '''
+    try:
+        (credential_name,) = credential_parameters
+    except ValueError:
+        name = ' '.join(credential_parameters)
+
+        raise ValueError(f'Cannot load invalid credential name: "{name}"')
+
+    credentials_directory = os.environ.get('CREDENTIALS_DIRECTORY')
+
+    if not credentials_directory:
+        raise ValueError(
+            f'Cannot load credential "{credential_name}" because the systemd CREDENTIALS_DIRECTORY environment variable is not set'
+        )
+
+    if not CREDENTIAL_NAME_PATTERN.match(credential_name):
+        raise ValueError(f'Cannot load invalid credential name "{credential_name}"')
+
+    try:
+        with open(os.path.join(credentials_directory, credential_name)) as credential_file:
+            return credential_file.read().rstrip(os.linesep)
+    except (FileNotFoundError, OSError) as error:
+        logger.warning(error)
+
+        raise ValueError(f'Cannot load credential "{credential_name}" from file: {error.filename}')

borgmatic/hooks/data_source/bootstrap.py

@@ -10,7 +10,7 @@ import borgmatic.config.paths
 logger = logging.getLogger(__name__)
 
 
-def use_streaming(hook_config, config, log_prefix):  # pragma: no cover
+def use_streaming(hook_config, config):  # pragma: no cover
     '''
     Return whether dump streaming is used for this hook. (Spoiler: It isn't.)
     '''
@@ -20,18 +20,17 @@ def use_streaming(hook_config, config, log_prefix):  # pragma: no cover
 def dump_data_sources(
     hook_config,
     config,
-    log_prefix,
     config_paths,
     borgmatic_runtime_directory,
     patterns,
     dry_run,
 ):
     '''
-    Given a bootstrap configuration dict, a configuration dict, a log prefix, the borgmatic
-    configuration file paths, the borgmatic runtime directory, the configured patterns, and whether
-    this is a dry run, create a borgmatic manifest file to store the paths of the configuration
-    files used to create the archive. But skip this if the bootstrap store_config_files option is
-    False or if this is a dry run.
+    Given a bootstrap configuration dict, a configuration dict, the borgmatic configuration file
+    paths, the borgmatic runtime directory, the configured patterns, and whether this is a dry run,
+    create a borgmatic manifest file to store the paths of the configuration files used to create
+    the archive. But skip this if the bootstrap store_config_files option is False or if this is a
+    dry run.
 
     Return an empty sequence, since there are no ongoing dump processes from this hook.
     '''
@@ -56,19 +55,27 @@ def dump_data_sources(
             manifest_file,
         )
 
-    patterns.extend(borgmatic.borg.pattern.Pattern(config_path) for config_path in config_paths)
+    patterns.extend(
+        borgmatic.borg.pattern.Pattern(
+            config_path, source=borgmatic.borg.pattern.Pattern_source.HOOK
+        )
+        for config_path in config_paths
+    )
     patterns.append(
-        borgmatic.borg.pattern.Pattern(os.path.join(borgmatic_runtime_directory, 'bootstrap'))
+        borgmatic.borg.pattern.Pattern(
+            os.path.join(borgmatic_runtime_directory, 'bootstrap'),
+            source=borgmatic.borg.pattern.Pattern_source.HOOK,
+        )
     )
 
     return []
 
 
-def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_directory, dry_run):
+def remove_data_source_dumps(hook_config, config, borgmatic_runtime_directory, dry_run):
     '''
-    Given a bootstrap configuration dict, a configuration dict, a log prefix, the borgmatic runtime
-    directory, and whether this is a dry run, then remove the manifest file created above. If this
-    is a dry run, then don't actually remove anything.
+    Given a bootstrap configuration dict, a configuration dict, the borgmatic runtime directory, and
+    whether this is a dry run, then remove the manifest file created above. If this is a dry run,
+    then don't actually remove anything.
     '''
     dry_run_label = ' (dry run; not actually removing anything)' if dry_run else ''
 
@@ -79,14 +86,12 @@ def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_
         'bootstrap',
     )
     logger.debug(
-        f'{log_prefix}: Looking for bootstrap manifest files to remove in {manifest_glob}{dry_run_label}'
+        f'Looking for bootstrap manifest files to remove in {manifest_glob}{dry_run_label}'
     )
 
     for manifest_directory in glob.glob(manifest_glob):
         manifest_file_path = os.path.join(manifest_directory, 'manifest.json')
-        logger.debug(
-            f'{log_prefix}: Removing bootstrap manifest at {manifest_file_path}{dry_run_label}'
-        )
+        logger.debug(f'Removing bootstrap manifest at {manifest_file_path}{dry_run_label}')
 
         if dry_run:
             continue
@@ -103,7 +108,7 @@ def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_
 
 
 def make_data_source_dump_patterns(
-    hook_config, config, log_prefix, borgmatic_runtime_directory, name=None
+    hook_config, config, borgmatic_runtime_directory, name=None
 ):  # pragma: no cover
     '''
     Restores are implemented via the separate, purpose-specific "bootstrap" action rather than the
@@ -115,7 +120,6 @@ def make_data_source_dump_patterns(
 def restore_data_source_dump(
     hook_config,
     config,
-    log_prefix,
     data_source,
     dry_run,
     extract_process,

borgmatic/hooks/data_source/btrfs.py

@@ -14,16 +14,16 @@ import borgmatic.hooks.data_source.snapshot
 logger = logging.getLogger(__name__)
 
 
-def use_streaming(hook_config, config, log_prefix):  # pragma: no cover
+def use_streaming(hook_config, config):  # pragma: no cover
     '''
     Return whether dump streaming is used for this hook. (Spoiler: It isn't.)
     '''
     return False
 
 
-def get_filesystem_mount_points(findmnt_command):
+def get_subvolume_mount_points(findmnt_command):
     '''
-    Given a findmnt command to run, get all top-level Btrfs filesystem mount points.
+    Given a findmnt command to run, get all sorted Btrfs subvolume mount points.
     '''
     findmnt_output = borgmatic.execute.execute_command_and_capture_output(
         tuple(findmnt_command.split(' '))
@@ -37,7 +37,7 @@ def get_filesystem_mount_points(findmnt_command):
 
     try:
         return tuple(
-            filesystem['target'] for filesystem in json.loads(findmnt_output)['filesystems']
+            sorted(filesystem['target'] for filesystem in json.loads(findmnt_output)['filesystems'])
         )
     except json.JSONDecodeError as error:
         raise ValueError(f'Invalid {findmnt_command} JSON output: {error}')
@@ -45,35 +45,48 @@ def get_filesystem_mount_points(findmnt_command):
         raise ValueError(f'Invalid {findmnt_command} output: Missing key "{error}"')
 
 
-def get_subvolumes_for_filesystem(btrfs_command, filesystem_mount_point):
-    '''
-    Given a Btrfs command to run and a Btrfs filesystem mount point, get the sorted subvolumes for
-    that filesystem. Include the filesystem itself.
-    '''
-    btrfs_output = borgmatic.execute.execute_command_and_capture_output(
+Subvolume = collections.namedtuple('Subvolume', ('path', 'contained_patterns'), defaults=((),))
+
+
+def get_subvolume_property(btrfs_command, subvolume_path, property_name):
+    output = borgmatic.execute.execute_command_and_capture_output(
         tuple(btrfs_command.split(' '))
         + (
-            'subvolume',
-            'list',
-            filesystem_mount_point,
-        )
+            'property',
+            'get',
+            '-t',  # Type.
+            'subvol',
+            subvolume_path,
+            property_name,
+        ),
     )
 
-    if not filesystem_mount_point.strip():
-        return ()
+    try:
+        value = output.strip().split('=')[1]
+    except IndexError:
+        raise ValueError(f'Invalid {btrfs_command} property output')
 
-    return (filesystem_mount_point,) + tuple(
-        sorted(
-            subvolume_path
-            for line in btrfs_output.splitlines()
-            for subvolume_subpath in (line.rstrip().split(' ')[-1],)
-            for subvolume_path in (os.path.join(filesystem_mount_point, subvolume_subpath),)
-            if subvolume_subpath.strip()
-        )
-    )
+    return {
+        'true': True,
+        'false': False,
+    }.get(value, value)
 
 
-Subvolume = collections.namedtuple('Subvolume', ('path', 'contained_patterns'), defaults=((),))
+def omit_read_only_subvolume_mount_points(btrfs_command, subvolume_paths):
+    '''
+    Given a Btrfs command to run and a sequence of Btrfs subvolume mount points, filter them down to
+    just those that are read-write. The idea is that Btrfs can't actually snapshot a read-only
+    subvolume, so we should just ignore them.
+    '''
+    retained_subvolume_paths = []
+
+    for subvolume_path in subvolume_paths:
+        if get_subvolume_property(btrfs_command, subvolume_path, 'ro'):
+            logger.debug(f'Ignoring Btrfs subvolume {subvolume_path} because it is read-only')
+        else:
+            retained_subvolume_paths.append(subvolume_path)
+
+    return tuple(retained_subvolume_paths)
 
 
 def get_subvolumes(btrfs_command, findmnt_command, patterns=None):
@@ -82,30 +95,37 @@ def get_subvolumes(btrfs_command, findmnt_command, patterns=None):
     between the current Btrfs filesystem and subvolume mount points and the paths of any patterns.
     The idea is that these pattern paths represent the requested subvolumes to snapshot.
 
-    If patterns is None, then return all subvolumes, sorted by path.
+    Only include subvolumes that contain at least one root pattern sourced from borgmatic
+    configuration (as opposed to generated elsewhere in borgmatic). But if patterns is None, then
+    return all subvolumes instead, sorted by path.
 
     Return the result as a sequence of matching subvolume mount points.
     '''
     candidate_patterns = set(patterns or ())
     subvolumes = []
 
-    # For each filesystem mount point, find its subvolumes and match them against the given patterns
-    # to find the subvolumes to backup. And within this loop, sort the subvolumes from longest to
-    # shortest mount points, so longer mount points get a whack at the candidate pattern piñata
-    # before their parents do. (Patterns are consumed during this process, so no two subvolumes end
-    # up with the same contained patterns.)
-    for mount_point in get_filesystem_mount_points(findmnt_command):
+    # For each subvolume mount point, match it against the given patterns to find the subvolumes to
+    # backup. Sort the subvolumes from longest to shortest mount points, so longer mount points get
+    # a whack at the candidate pattern piñata before their parents do. (Patterns are consumed during
+    # this process, so no two subvolumes end up with the same contained patterns.)
+    for mount_point in reversed(
+        omit_read_only_subvolume_mount_points(
+            btrfs_command, get_subvolume_mount_points(findmnt_command)
+        )
+    ):
         subvolumes.extend(
-            Subvolume(subvolume_path, contained_patterns)
-            for subvolume_path in reversed(
-                get_subvolumes_for_filesystem(btrfs_command, mount_point)
-            )
+            Subvolume(mount_point, contained_patterns)
             for contained_patterns in (
                 borgmatic.hooks.data_source.snapshot.get_contained_patterns(
-                    subvolume_path, candidate_patterns
+                    mount_point, candidate_patterns
                 ),
             )
-            if patterns is None or contained_patterns
+            if patterns is None
+            or any(
+                pattern.type == borgmatic.borg.pattern.Pattern_type.ROOT
+                and pattern.source == borgmatic.borg.pattern.Pattern_source.CONFIG
+                for pattern in contained_patterns
+            )
         )
 
     return tuple(sorted(subvolumes, key=lambda subvolume: subvolume.path))
@@ -151,8 +171,9 @@ def make_snapshot_exclude_pattern(subvolume_path):  # pragma: no cover
             subvolume_path.lstrip(os.path.sep),
             snapshot_directory,
         ),
-        borgmatic.borg.pattern.Pattern_type.EXCLUDE,
+        borgmatic.borg.pattern.Pattern_type.NO_RECURSE,
         borgmatic.borg.pattern.Pattern_style.FNMATCH,
+        source=borgmatic.borg.pattern.Pattern_source.HOOK,
     )
 
 
@@ -185,6 +206,7 @@ def make_borg_snapshot_pattern(subvolume_path, pattern):
         pattern.type,
         pattern.style,
         pattern.device,
+        source=borgmatic.borg.pattern.Pattern_source.HOOK,
     )
 
 
@@ -211,38 +233,37 @@ def snapshot_subvolume(btrfs_command, subvolume_path, snapshot_path):  # pragma:
 def dump_data_sources(
     hook_config,
     config,
-    log_prefix,
     config_paths,
     borgmatic_runtime_directory,
     patterns,
     dry_run,
 ):
     '''
-    Given a Btrfs configuration dict, a configuration dict, a log prefix, the borgmatic
-    configuration file paths, the borgmatic runtime directory, the configured patterns, and whether
-    this is a dry run, auto-detect and snapshot any Btrfs subvolume mount points listed in the given
-    patterns. Also update those patterns, replacing subvolume mount points with corresponding
-    snapshot directories so they get stored in the Borg archive instead. Use the log prefix in any
-    log entries.
+    Given a Btrfs configuration dict, a configuration dict, the borgmatic configuration file paths,
+    the borgmatic runtime directory, the configured patterns, and whether this is a dry run,
+    auto-detect and snapshot any Btrfs subvolume mount points listed in the given patterns. Also
+    update those patterns, replacing subvolume mount points with corresponding snapshot directories
+    so they get stored in the Borg archive instead.
 
     Return an empty sequence, since there are no ongoing dump processes from this hook.
 
     If this is a dry run, then don't actually snapshot anything.
     '''
     dry_run_label = ' (dry run; not actually snapshotting anything)' if dry_run else ''
-    logger.info(f'{log_prefix}: Snapshotting Btrfs subvolumes{dry_run_label}')
+    logger.info(f'Snapshotting Btrfs subvolumes{dry_run_label}')
 
-    # Based on the configured patterns, determine Btrfs subvolumes to backup.
+    # Based on the configured patterns, determine Btrfs subvolumes to backup. Only consider those
+    # patterns that came from actual user configuration (as opposed to, say, other hooks).
     btrfs_command = hook_config.get('btrfs_command', 'btrfs')
     findmnt_command = hook_config.get('findmnt_command', 'findmnt')
     subvolumes = get_subvolumes(btrfs_command, findmnt_command, patterns)
 
     if not subvolumes:
-        logger.warning(f'{log_prefix}: No Btrfs subvolumes found to snapshot{dry_run_label}')
+        logger.warning(f'No Btrfs subvolumes found to snapshot{dry_run_label}')
 
     # Snapshot each subvolume, rewriting patterns to use their snapshot paths.
     for subvolume in subvolumes:
-        logger.debug(f'{log_prefix}: Creating Btrfs snapshot for {subvolume.path} subvolume')
+        logger.debug(f'Creating Btrfs snapshot for {subvolume.path} subvolume')
 
         snapshot_path = make_snapshot_path(subvolume.path)
 
@@ -280,12 +301,11 @@ def delete_snapshot(btrfs_command, snapshot_path):  # pragma: no cover
     )
 
 
-def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_directory, dry_run):
+def remove_data_source_dumps(hook_config, config, borgmatic_runtime_directory, dry_run):
     '''
-    Given a Btrfs configuration dict, a configuration dict, a log prefix, the borgmatic runtime
-    directory, and whether this is a dry run, delete any Btrfs snapshots created by borgmatic. Use
-    the log prefix in any log entries. If this is a dry run or Btrfs isn't configured in borgmatic's
-    configuration, then don't actually remove anything.
+    Given a Btrfs configuration dict, a configuration dict, the borgmatic runtime directory, and
+    whether this is a dry run, delete any Btrfs snapshots created by borgmatic. If this is a dry run
+    or Btrfs isn't configured in borgmatic's configuration, then don't actually remove anything.
     '''
     if hook_config is None:
         return
@@ -298,10 +318,10 @@ def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_
     try:
         all_subvolumes = get_subvolumes(btrfs_command, findmnt_command)
     except FileNotFoundError as error:
-        logger.debug(f'{log_prefix}: Could not find "{error.filename}" command')
+        logger.debug(f'Could not find "{error.filename}" command')
         return
     except subprocess.CalledProcessError as error:
-        logger.debug(f'{log_prefix}: {error}')
+        logger.debug(error)
         return
 
     # Reversing the sorted subvolumes ensures that we remove longer mount point paths of child
@@ -313,14 +333,14 @@ def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_
         )
 
         logger.debug(
-            f'{log_prefix}: Looking for snapshots to remove in {subvolume_snapshots_glob}{dry_run_label}'
+            f'Looking for snapshots to remove in {subvolume_snapshots_glob}{dry_run_label}'
         )
 
         for snapshot_path in glob.glob(subvolume_snapshots_glob):
             if not os.path.isdir(snapshot_path):
                 continue
 
-            logger.debug(f'{log_prefix}: Deleting Btrfs snapshot {snapshot_path}{dry_run_label}')
+            logger.debug(f'Deleting Btrfs snapshot {snapshot_path}{dry_run_label}')
 
             if dry_run:
                 continue
@@ -328,19 +348,22 @@ def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_
             try:
                 delete_snapshot(btrfs_command, snapshot_path)
             except FileNotFoundError:
-                logger.debug(f'{log_prefix}: Could not find "{btrfs_command}" command')
+                logger.debug(f'Could not find "{btrfs_command}" command')
                 return
             except subprocess.CalledProcessError as error:
-                logger.debug(f'{log_prefix}: {error}')
+                logger.debug(error)
                 return
 
-            # Strip off the subvolume path from the end of the snapshot path and then delete the
-            # resulting directory.
-            shutil.rmtree(snapshot_path.rsplit(subvolume.path, 1)[0])
+            # Remove the snapshot parent directory if it still exists. (It might not exist if the
+            # snapshot was for "/".)
+            snapshot_parent_dir = snapshot_path.rsplit(subvolume.path, 1)[0]
+
+            if os.path.isdir(snapshot_parent_dir):
+                shutil.rmtree(snapshot_parent_dir)
 
 
 def make_data_source_dump_patterns(
-    hook_config, config, log_prefix, borgmatic_runtime_directory, name=None
+    hook_config, config, borgmatic_runtime_directory, name=None
 ):  # pragma: no cover
     '''
     Restores aren't implemented, because stored files can be extracted directly with "extract".
@@ -351,7 +374,6 @@ def make_data_source_dump_patterns(
 def restore_data_source_dump(
     hook_config,
     config,
-    log_prefix,
     data_source,
     dry_run,
     extract_process,

borgmatic/hooks/data_source/dump.py

@@ -46,14 +46,14 @@ def create_named_pipe_for_dump(dump_path):
     os.mkfifo(dump_path, mode=0o600)
 
 
-def remove_data_source_dumps(dump_path, data_source_type_name, log_prefix, dry_run):
+def remove_data_source_dumps(dump_path, data_source_type_name, dry_run):
     '''
     Remove all data source dumps in the given dump directory path (including the directory itself).
     If this is a dry run, then don't actually remove anything.
     '''
     dry_run_label = ' (dry run; not actually removing anything)' if dry_run else ''
 
-    logger.debug(f'{log_prefix}: Removing {data_source_type_name} data source dumps{dry_run_label}')
+    logger.debug(f'Removing {data_source_type_name} data source dumps{dry_run_label}')
 
     if dry_run:
         return

borgmatic/hooks/data_source/lvm.py

@@ -1,5 +1,6 @@
 import collections
 import glob
+import hashlib
 import json
 import logging
 import os
@@ -14,7 +15,7 @@ import borgmatic.hooks.data_source.snapshot
 logger = logging.getLogger(__name__)
 
 
-def use_streaming(hook_config, config, log_prefix):  # pragma: no cover
+def use_streaming(hook_config, config):  # pragma: no cover
     '''
     Return whether dump streaming is used for this hook. (Spoiler: It isn't.)
     '''
@@ -33,7 +34,9 @@ def get_logical_volumes(lsblk_command, patterns=None):
     between the current LVM logical volume mount points and the paths of any patterns. The idea is
     that these pattern paths represent the requested logical volumes to snapshot.
 
-    If patterns is None, include all logical volume mounts points, not just those in patterns.
+    Only include logical volumes that contain at least one root pattern sourced from borgmatic
+    configuration (as opposed to generated elsewhere in borgmatic). But if patterns is None, include
+    all logical volume mounts points instead, not just those in patterns.
 
     Return the result as a sequence of Logical_volume instances.
     '''
@@ -72,7 +75,12 @@ def get_logical_volumes(lsblk_command, patterns=None):
                     device['mountpoint'], candidate_patterns
                 ),
             )
-            if not patterns or contained_patterns
+            if not patterns
+            or any(
+                pattern.type == borgmatic.borg.pattern.Pattern_type.ROOT
+                and pattern.source == borgmatic.borg.pattern.Pattern_source.CONFIG
+                for pattern in contained_patterns
+            )
         )
     except KeyError as error:
         raise ValueError(f'Invalid {lsblk_command} output: Missing key "{error}"')
@@ -124,10 +132,14 @@ def mount_snapshot(mount_command, snapshot_device, snapshot_mount_path):  # prag
     )
 
 
-def make_borg_snapshot_pattern(pattern, normalized_runtime_directory):
+MOUNT_POINT_HASH_LENGTH = 10
+
+
+def make_borg_snapshot_pattern(pattern, logical_volume, normalized_runtime_directory):
     '''
-    Given a Borg pattern as a borgmatic.borg.pattern.Pattern instance, return a new Pattern with its
-    path rewritten to be in a snapshot directory based on the given runtime directory.
+    Given a Borg pattern as a borgmatic.borg.pattern.Pattern instance and a Logical_volume
+    containing it, return a new Pattern with its path rewritten to be in a snapshot directory based
+    on both the given runtime directory and the given Logical_volume's mount point.
 
     Move any initial caret in a regular expression pattern path to the beginning, so as not to break
     the regular expression.
@@ -142,6 +154,13 @@ def make_borg_snapshot_pattern(pattern, normalized_runtime_directory):
     rewritten_path = initial_caret + os.path.join(
         normalized_runtime_directory,
         'lvm_snapshots',
+        # Including this hash prevents conflicts between snapshot patterns for different logical
+        # volumes. For instance, without this, snapshotting a logical volume at /var and another at
+        # /var/spool would result in overlapping snapshot patterns and therefore colliding mount
+        # attempts.
+        hashlib.shake_256(logical_volume.mount_point.encode('utf-8')).hexdigest(
+            MOUNT_POINT_HASH_LENGTH
+        ),
         '.',  # Borg 1.4+ "slashdot" hack.
         # Included so that the source directory ends up in the Borg archive at its "original" path.
         pattern.path.lstrip('^').lstrip(os.path.sep),
@@ -152,6 +171,7 @@ def make_borg_snapshot_pattern(pattern, normalized_runtime_directory):
         pattern.type,
         pattern.style,
         pattern.device,
+        source=borgmatic.borg.pattern.Pattern_source.HOOK,
     )
 
 
@@ -161,28 +181,27 @@ DEFAULT_SNAPSHOT_SIZE = '10%ORIGIN'
 def dump_data_sources(
     hook_config,
     config,
-    log_prefix,
     config_paths,
     borgmatic_runtime_directory,
     patterns,
     dry_run,
 ):
     '''
-    Given an LVM configuration dict, a configuration dict, a log prefix, the borgmatic configuration
-    file paths, the borgmatic runtime directory, the configured patterns, and whether this is a dry
-    run, auto-detect and snapshot any LVM logical volume mount points listed in the given patterns.
-    Also update those patterns, replacing logical volume mount points with corresponding snapshot
-    directories so they get stored in the Borg archive instead. Use the log prefix in any log
-    entries.
+    Given an LVM configuration dict, a configuration dict, the borgmatic configuration file paths,
+    the borgmatic runtime directory, the configured patterns, and whether this is a dry run,
+    auto-detect and snapshot any LVM logical volume mount points listed in the given patterns. Also
+    update those patterns, replacing logical volume mount points with corresponding snapshot
+    directories so they get stored in the Borg archive instead.
 
     Return an empty sequence, since there are no ongoing dump processes from this hook.
 
     If this is a dry run, then don't actually snapshot anything.
     '''
     dry_run_label = ' (dry run; not actually snapshotting anything)' if dry_run else ''
-    logger.info(f'{log_prefix}: Snapshotting LVM logical volumes{dry_run_label}')
+    logger.info(f'Snapshotting LVM logical volumes{dry_run_label}')
 
-    # List logical volumes to get their mount points.
+    # List logical volumes to get their mount points, but only consider those patterns that came
+    # from actual user configuration (as opposed to, say, other hooks).
     lsblk_command = hook_config.get('lsblk_command', 'lsblk')
     requested_logical_volumes = get_logical_volumes(lsblk_command, patterns)
 
@@ -191,12 +210,12 @@ def dump_data_sources(
     normalized_runtime_directory = os.path.normpath(borgmatic_runtime_directory)
 
     if not requested_logical_volumes:
-        logger.warning(f'{log_prefix}: No LVM logical volumes found to snapshot{dry_run_label}')
+        logger.warning(f'No LVM logical volumes found to snapshot{dry_run_label}')
 
     for logical_volume in requested_logical_volumes:
         snapshot_name = f'{logical_volume.name}_{snapshot_suffix}'
         logger.debug(
-            f'{log_prefix}: Creating LVM snapshot {snapshot_name} of {logical_volume.mount_point}{dry_run_label}'
+            f'Creating LVM snapshot {snapshot_name} of {logical_volume.mount_point}{dry_run_label}'
         )
 
         if not dry_run:
@@ -220,11 +239,14 @@ def dump_data_sources(
         snapshot_mount_path = os.path.join(
             normalized_runtime_directory,
             'lvm_snapshots',
+            hashlib.shake_256(logical_volume.mount_point.encode('utf-8')).hexdigest(
+                MOUNT_POINT_HASH_LENGTH
+            ),
             logical_volume.mount_point.lstrip(os.path.sep),
         )
 
         logger.debug(
-            f'{log_prefix}: Mounting LVM snapshot {snapshot_name} at {snapshot_mount_path}{dry_run_label}'
+            f'Mounting LVM snapshot {snapshot_name} at {snapshot_mount_path}{dry_run_label}'
         )
 
         if dry_run:
@@ -235,7 +257,9 @@ def dump_data_sources(
         )
 
         for pattern in logical_volume.contained_patterns:
-            snapshot_pattern = make_borg_snapshot_pattern(pattern, normalized_runtime_directory)
+            snapshot_pattern = make_borg_snapshot_pattern(
+                pattern, logical_volume, normalized_runtime_directory
+            )
 
             # Attempt to update the pattern in place, since pattern order matters to Borg.
             try:
@@ -312,12 +336,12 @@ def get_snapshots(lvs_command, snapshot_name=None):
         raise ValueError(f'Invalid {lvs_command} output: Missing key "{error}"')
 
 
-def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_directory, dry_run):
+def remove_data_source_dumps(hook_config, config, borgmatic_runtime_directory, dry_run):
     '''
-    Given an LVM configuration dict, a configuration dict, a log prefix, the borgmatic runtime
-    directory, and whether this is a dry run, unmount and delete any LVM snapshots created by
-    borgmatic. Use the log prefix in any log entries. If this is a dry run or LVM isn't configured
-    in borgmatic's configuration, then don't actually remove anything.
+    Given an LVM configuration dict, a configuration dict, the borgmatic runtime directory, and
+    whether this is a dry run, unmount and delete any LVM snapshots created by borgmatic. If this is
+    a dry run or LVM isn't configured in borgmatic's configuration, then don't actually remove
+    anything.
     '''
     if hook_config is None:
         return
@@ -328,10 +352,10 @@ def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_
     try:
         logical_volumes = get_logical_volumes(hook_config.get('lsblk_command', 'lsblk'))
     except FileNotFoundError as error:
-        logger.debug(f'{log_prefix}: Could not find "{error.filename}" command')
+        logger.debug(f'Could not find "{error.filename}" command')
         return
     except subprocess.CalledProcessError as error:
-        logger.debug(f'{log_prefix}: {error}')
+        logger.debug(error)
         return
 
     snapshots_glob = os.path.join(
@@ -339,10 +363,9 @@ def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_
             os.path.normpath(borgmatic_runtime_directory),
         ),
         'lvm_snapshots',
+        '*',
     )
-    logger.debug(
-        f'{log_prefix}: Looking for snapshots to remove in {snapshots_glob}{dry_run_label}'
-    )
+    logger.debug(f'Looking for snapshots to remove in {snapshots_glob}{dry_run_label}')
     umount_command = hook_config.get('umount_command', 'umount')
 
     for snapshots_directory in glob.glob(snapshots_glob):
@@ -353,7 +376,10 @@ def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_
             snapshot_mount_path = os.path.join(
                 snapshots_directory, logical_volume.mount_point.lstrip(os.path.sep)
             )
-            if not os.path.isdir(snapshot_mount_path):
+
+            # If the snapshot mount path is empty, this is probably just a "shadow" of a nested
+            # logical volume and therefore there's nothing to unmount.
+            if not os.path.isdir(snapshot_mount_path) or not os.listdir(snapshot_mount_path):
                 continue
 
             # This might fail if the directory is already mounted, but we swallow errors here since
@@ -366,9 +392,7 @@ def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_
                 if not os.path.isdir(snapshot_mount_path):
                     continue
 
-            logger.debug(
-                f'{log_prefix}: Unmounting LVM snapshot at {snapshot_mount_path}{dry_run_label}'
-            )
+            logger.debug(f'Unmounting LVM snapshot at {snapshot_mount_path}{dry_run_label}')
 
             if dry_run:
                 continue
@@ -376,14 +400,14 @@ def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_
             try:
                 unmount_snapshot(umount_command, snapshot_mount_path)
             except FileNotFoundError:
-                logger.debug(f'{log_prefix}: Could not find "{umount_command}" command')
+                logger.debug(f'Could not find "{umount_command}" command')
                 return
             except subprocess.CalledProcessError as error:
-                logger.debug(f'{log_prefix}: {error}')
-                return
+                logger.debug(error)
+                continue
 
         if not dry_run:
-            shutil.rmtree(snapshots_directory)
+            shutil.rmtree(snapshots_directory, ignore_errors=True)
 
     # Delete snapshots.
     lvremove_command = hook_config.get('lvremove_command', 'lvremove')
@@ -391,10 +415,10 @@ def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_
     try:
         snapshots = get_snapshots(hook_config.get('lvs_command', 'lvs'))
     except FileNotFoundError as error:
-        logger.debug(f'{log_prefix}: Could not find "{error.filename}" command')
+        logger.debug(f'Could not find "{error.filename}" command')
         return
     except subprocess.CalledProcessError as error:
-        logger.debug(f'{log_prefix}: {error}')
+        logger.debug(error)
         return
 
     for snapshot in snapshots:
@@ -402,14 +426,14 @@ def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_
         if not snapshot.name.split('_')[-1].startswith(BORGMATIC_SNAPSHOT_PREFIX):
             continue
 
-        logger.debug(f'{log_prefix}: Deleting LVM snapshot {snapshot.name}{dry_run_label}')
+        logger.debug(f'Deleting LVM snapshot {snapshot.name}{dry_run_label}')
 
         if not dry_run:
             remove_snapshot(lvremove_command, snapshot.device_path)
 
 
 def make_data_source_dump_patterns(
-    hook_config, config, log_prefix, borgmatic_runtime_directory, name=None
+    hook_config, config, borgmatic_runtime_directory, name=None
 ):  # pragma: no cover
     '''
     Restores aren't implemented, because stored files can be extracted directly with "extract".
@@ -420,7 +444,6 @@ def make_data_source_dump_patterns(
 def restore_data_source_dump(
     hook_config,
     config,
-    log_prefix,
     data_source,
     dry_run,
     extract_process,

borgmatic/hooks/data_source/mariadb.py

@@ -1,10 +1,12 @@
 import copy
 import logging
 import os
+import re
 import shlex
 
 import borgmatic.borg.pattern
 import borgmatic.config.paths
+import borgmatic.hooks.credential.parse
 from borgmatic.execute import (
     execute_command,
     execute_command_and_capture_output,
@@ -22,14 +24,92 @@ def make_dump_path(base_directory):  # pragma: no cover
     return dump.make_data_source_dump_path(base_directory, 'mariadb_databases')
 
 
-SYSTEM_DATABASE_NAMES = ('information_schema', 'mysql', 'performance_schema', 'sys')
+DEFAULTS_EXTRA_FILE_FLAG_PATTERN = re.compile('^--defaults-extra-file=(?P<filename>.*)$')
 
 
-def database_names_to_dump(database, extra_environment, log_prefix, dry_run):
+def parse_extra_options(extra_options):
     '''
-    Given a requested database config, return the corresponding sequence of database names to dump.
-    In the case of "all", query for the names of databases on the configured host and return them,
-    excluding any system databases that will cause problems during restore.
+    Given an extra options string, split the options into a tuple and return it. Additionally, if
+    the first option is "--defaults-extra-file=...", then remove it from the options and return the
+    filename.
+
+    So the return value is a tuple of: (parsed options, defaults extra filename).
+
+    The intent is to support downstream merging of multiple "--defaults-extra-file"s, as
+    MariaDB/MySQL only allows one at a time.
+    '''
+    split_extra_options = tuple(shlex.split(extra_options)) if extra_options else ()
+
+    if not split_extra_options:
+        return ((), None)
+
+    match = DEFAULTS_EXTRA_FILE_FLAG_PATTERN.match(split_extra_options[0])
+
+    if not match:
+        return (split_extra_options, None)
+
+    return (split_extra_options[1:], match.group('filename'))
+
+
+def make_defaults_file_options(username=None, password=None, defaults_extra_filename=None):
+    '''
+    Given a database username and/or password, write it to an anonymous pipe and return the flags
+    for passing that file descriptor to an executed command. The idea is that this is a more secure
+    way to transmit credentials to a database client than using an environment variable.
+
+    If no username or password are given, then return the options for the given defaults extra
+    filename (if any). But if there is a username and/or password and a defaults extra filename is
+    given, then "!include" it from the generated file, effectively allowing multiple defaults extra
+    files.
+
+    Do not use the returned value for multiple different command invocations. That will not work
+    because each pipe is "used up" once read.
+    '''
+    escaped_password = None if password is None else password.replace('\\', '\\\\')
+
+    values = '\n'.join(
+        (
+            (f'user={username}' if username is not None else ''),
+            (f'password="{escaped_password}"' if escaped_password is not None else ''),
+        )
+    ).strip()
+
+    if not values:
+        if defaults_extra_filename:
+            return (f'--defaults-extra-file={defaults_extra_filename}',)
+
+        return ()
+
+    fields_message = ' and '.join(
+        field_name
+        for field_name in (
+            (f'username ({username})' if username is not None else None),
+            ('password' if password is not None else None),
+        )
+        if field_name is not None
+    )
+    include_message = f' (including {defaults_extra_filename})' if defaults_extra_filename else ''
+    logger.debug(f'Writing database {fields_message} to defaults extra file pipe{include_message}')
+
+    include = f'!include {defaults_extra_filename}\n' if defaults_extra_filename else ''
+
+    read_file_descriptor, write_file_descriptor = os.pipe()
+    os.write(write_file_descriptor, f'{include}[client]\n{values}'.encode('utf-8'))
+    os.close(write_file_descriptor)
+
+    # This plus subprocess.Popen(..., close_fds=False) in execute.py is necessary for the database
+    # client child process to inherit the file descriptor.
+    os.set_inheritable(read_file_descriptor, True)
+
+    return (f'--defaults-extra-file=/dev/fd/{read_file_descriptor}',)
+
+
+def database_names_to_dump(database, config, username, password, environment, dry_run):
+    '''
+    Given a requested database config, a configuration dict, a database username and password, an
+    environment dict, and whether this is a dry run, return the corresponding sequence of database
+    names to dump. In the case of "all", query for the names of databases on the configured host and
+    return them, excluding any system databases that will cause problems during restore.
     '''
     if database['name'] != 'all':
         return (database['name'],)
@@ -39,20 +119,23 @@ def database_names_to_dump(database, extra_environment, log_prefix, dry_run):
     mariadb_show_command = tuple(
         shlex.quote(part) for part in shlex.split(database.get('mariadb_command') or 'mariadb')
     )
+    extra_options, defaults_extra_filename = parse_extra_options(database.get('list_options'))
     show_command = (
         mariadb_show_command
-        + (tuple(database['list_options'].split(' ')) if 'list_options' in database else ())
+        + make_defaults_file_options(username, password, defaults_extra_filename)
+        + extra_options
         + (('--host', database['hostname']) if 'hostname' in database else ())
         + (('--port', str(database['port'])) if 'port' in database else ())
         + (('--protocol', 'tcp') if 'hostname' in database or 'port' in database else ())
-        + (('--user', database['username']) if 'username' in database else ())
+        + (('--ssl',) if database.get('tls') is True else ())
+        + (('--skip-ssl',) if database.get('tls') is False else ())
         + ('--skip-column-names', '--batch')
         + ('--execute', 'show schemas')
     )
-    logger.debug(f'{log_prefix}: Querying for "all" MariaDB databases to dump')
-    show_output = execute_command_and_capture_output(
-        show_command, extra_environment=extra_environment
-    )
+
+    logger.debug('Querying for "all" MariaDB databases to dump')
+
+    show_output = execute_command_and_capture_output(show_command, environment=environment)
 
     return tuple(
         show_name
@@ -61,13 +144,23 @@ def database_names_to_dump(database, extra_environment, log_prefix, dry_run):
     )
 
 
+SYSTEM_DATABASE_NAMES = ('information_schema', 'mysql', 'performance_schema', 'sys')
+
+
 def execute_dump_command(
-    database, log_prefix, dump_path, database_names, extra_environment, dry_run, dry_run_label
+    database,
+    config,
+    username,
+    password,
+    dump_path,
+    database_names,
+    environment,
+    dry_run,
+    dry_run_label,
 ):
     '''
     Kick off a dump for the given MariaDB database (provided as a configuration dict) to a named
-    pipe constructed from the given dump path and database name. Use the given log prefix in any
-    log entries.
+    pipe constructed from the given dump path and database name.
 
     Return a subprocess.Popen instance for the dump process ready to spew to a named pipe. But if
     this is a dry run, then don't actually dump anything and return None.
@@ -82,7 +175,7 @@ def execute_dump_command(
 
     if os.path.exists(dump_filename):
         logger.warning(
-            f'{log_prefix}: Skipping duplicate dump of MariaDB database "{database_name}" to {dump_filename}'
+            f'Skipping duplicate dump of MariaDB database "{database_name}" to {dump_filename}'
         )
         return None
 
@@ -90,22 +183,23 @@ def execute_dump_command(
         shlex.quote(part)
         for part in shlex.split(database.get('mariadb_dump_command') or 'mariadb-dump')
     )
+    extra_options, defaults_extra_filename = parse_extra_options(database.get('options'))
     dump_command = (
         mariadb_dump_command
-        + (tuple(database['options'].split(' ')) if 'options' in database else ())
+        + make_defaults_file_options(username, password, defaults_extra_filename)
+        + extra_options
         + (('--add-drop-database',) if database.get('add_drop_database', True) else ())
         + (('--host', database['hostname']) if 'hostname' in database else ())
         + (('--port', str(database['port'])) if 'port' in database else ())
         + (('--protocol', 'tcp') if 'hostname' in database or 'port' in database else ())
-        + (('--user', database['username']) if 'username' in database else ())
+        + (('--ssl',) if database.get('tls') is True else ())
+        + (('--skip-ssl',) if database.get('tls') is False else ())
         + ('--databases',)
         + database_names
         + ('--result-file', dump_filename)
     )
 
-    logger.debug(
-        f'{log_prefix}: Dumping MariaDB database "{database_name}" to {dump_filename}{dry_run_label}'
-    )
+    logger.debug(f'Dumping MariaDB database "{database_name}" to {dump_filename}{dry_run_label}')
     if dry_run:
         return None
 
@@ -113,19 +207,19 @@ def execute_dump_command(
 
     return execute_command(
         dump_command,
-        extra_environment=extra_environment,
+        environment=environment,
         run_to_completion=False,
     )
 
 
-def get_default_port(databases, config, log_prefix):  # pragma: no cover
+def get_default_port(databases, config):  # pragma: no cover
     return 3306
 
 
-def use_streaming(databases, config, log_prefix):
+def use_streaming(databases, config):
     '''
-    Given a sequence of MariaDB database configuration dicts, a configuration dict (ignored), and a
-    log prefix (ignored), return whether streaming will be using during dumps.
+    Given a sequence of MariaDB database configuration dicts, a configuration dict (ignored), return
+    whether streaming will be using during dumps.
     '''
     return any(databases)
 
@@ -133,7 +227,6 @@ def use_streaming(databases, config, log_prefix):
 def dump_data_sources(
     databases,
     config,
-    log_prefix,
     config_paths,
     borgmatic_runtime_directory,
     patterns,
@@ -142,8 +235,7 @@ def dump_data_sources(
     '''
     Dump the given MariaDB databases to a named pipe. The databases are supplied as a sequence of
     dicts, one dict describing each database as per the configuration schema. Use the given
-    borgmatic runtime directory to construct the destination path and the given log prefix in any
-    log entries.
+    borgmatic runtime directory to construct the destination path.
 
     Return a sequence of subprocess.Popen instances for the dump processes ready to spew to a named
     pipe. But if this is a dry run, then don't actually dump anything and return an empty sequence.
@@ -153,13 +245,19 @@ def dump_data_sources(
     dry_run_label = ' (dry run; not actually dumping anything)' if dry_run else ''
     processes = []
 
-    logger.info(f'{log_prefix}: Dumping MariaDB databases{dry_run_label}')
+    logger.info(f'Dumping MariaDB databases{dry_run_label}')
 
     for database in databases:
         dump_path = make_dump_path(borgmatic_runtime_directory)
-        extra_environment = {'MYSQL_PWD': database['password']} if 'password' in database else None
+        username = borgmatic.hooks.credential.parse.resolve_credential(
+            database.get('username'), config
+        )
+        password = borgmatic.hooks.credential.parse.resolve_credential(
+            database.get('password'), config
+        )
+        environment = dict(os.environ)
         dump_database_names = database_names_to_dump(
-            database, extra_environment, log_prefix, dry_run
+            database, config, username, password, environment, dry_run
         )
 
         if not dump_database_names:
@@ -175,10 +273,12 @@ def dump_data_sources(
                 processes.append(
                     execute_dump_command(
                         renamed_database,
-                        log_prefix,
+                        config,
+                        username,
+                        password,
                         dump_path,
                         (dump_name,),
-                        extra_environment,
+                        environment,
                         dry_run,
                         dry_run_label,
                     )
@@ -187,10 +287,12 @@ def dump_data_sources(
             processes.append(
                 execute_dump_command(
                     database,
-                    log_prefix,
+                    config,
+                    username,
+                    password,
                     dump_path,
                     dump_database_names,
-                    extra_environment,
+                    environment,
                     dry_run,
                     dry_run_label,
                 )
@@ -199,7 +301,8 @@ def dump_data_sources(
     if not dry_run:
         patterns.append(
             borgmatic.borg.pattern.Pattern(
-                os.path.join(borgmatic_runtime_directory, 'mariadb_databases')
+                os.path.join(borgmatic_runtime_directory, 'mariadb_databases'),
+                source=borgmatic.borg.pattern.Pattern_source.HOOK,
             )
         )
 
@@ -207,25 +310,23 @@ def dump_data_sources(
 
 
 def remove_data_source_dumps(
-    databases, config, log_prefix, borgmatic_runtime_directory, dry_run
+    databases, config, borgmatic_runtime_directory, dry_run
 ):  # pragma: no cover
     '''
     Remove all database dump files for this hook regardless of the given databases. Use the
-    borgmatic_runtime_directory to construct the destination path and the log prefix in any log
-    entries. If this is a dry run, then don't actually remove anything.
+    borgmatic_runtime_directory to construct the destination path. If this is a dry run, then don't
+    actually remove anything.
     '''
-    dump.remove_data_source_dumps(
-        make_dump_path(borgmatic_runtime_directory), 'MariaDB', log_prefix, dry_run
-    )
+    dump.remove_data_source_dumps(make_dump_path(borgmatic_runtime_directory), 'MariaDB', dry_run)
 
 
 def make_data_source_dump_patterns(
-    databases, config, log_prefix, borgmatic_runtime_directory, name=None
+    databases, config, borgmatic_runtime_directory, name=None
 ):  # pragma: no cover
     '''
-    Given a sequence of configurations dicts, a configuration dict, a prefix to log with, the
-    borgmatic runtime directory, and a database name to match, return the corresponding glob
-    patterns to match the database dump in an archive.
+    Given a sequence of configurations dicts, a configuration dict, the borgmatic runtime directory,
+    and a database name to match, return the corresponding glob patterns to match the database dump
+    in an archive.
     '''
     borgmatic_source_directory = borgmatic.config.paths.get_borgmatic_source_directory(config)
 
@@ -243,7 +344,6 @@ def make_data_source_dump_patterns(
 def restore_data_source_dump(
     hook_config,
     config,
-    log_prefix,
     data_source,
     dry_run,
     extract_process,
@@ -252,9 +352,9 @@ def restore_data_source_dump(
 ):
     '''
     Restore a database from the given extract stream. The database is supplied as a data source
-    configuration dict, but the given hook configuration is ignored. The given log prefix is used
-    for any log entries. If this is a dry run, then don't actually restore anything. Trigger the
-    given active extract process (an instance of subprocess.Popen) to produce output to consume.
+    configuration dict, but the given hook configuration is ignored. If this is a dry run, then
+    don't actually restore anything. Trigger the given active extract process (an instance of
+    subprocess.Popen) to produce output to consume.
     '''
     dry_run_label = ' (dry run; not actually restoring anything)' if dry_run else ''
     hostname = connection_params['hostname'] or data_source.get(
@@ -263,32 +363,40 @@ def restore_data_source_dump(
     port = str(
         connection_params['port'] or data_source.get('restore_port', data_source.get('port', ''))
     )
-    username = connection_params['username'] or data_source.get(
-        'restore_username', data_source.get('username')
+    tls = data_source.get('restore_tls', data_source.get('tls'))
+    username = borgmatic.hooks.credential.parse.resolve_credential(
+        (
+            connection_params['username']
+            or data_source.get('restore_username', data_source.get('username'))
+        ),
+        config,
     )
-    password = connection_params['password'] or data_source.get(
-        'restore_password', data_source.get('password')
+    password = borgmatic.hooks.credential.parse.resolve_credential(
+        (
+            connection_params['password']
+            or data_source.get('restore_password', data_source.get('password'))
+        ),
+        config,
     )
 
     mariadb_restore_command = tuple(
         shlex.quote(part) for part in shlex.split(data_source.get('mariadb_command') or 'mariadb')
     )
+    extra_options, defaults_extra_filename = parse_extra_options(data_source.get('restore_options'))
     restore_command = (
         mariadb_restore_command
+        + make_defaults_file_options(username, password, defaults_extra_filename)
+        + extra_options
         + ('--batch',)
-        + (
-            tuple(data_source['restore_options'].split(' '))
-            if 'restore_options' in data_source
-            else ()
-        )
         + (('--host', hostname) if hostname else ())
         + (('--port', str(port)) if port else ())
         + (('--protocol', 'tcp') if hostname or port else ())
-        + (('--user', username) if username else ())
+        + (('--ssl',) if tls is True else ())
+        + (('--skip-ssl',) if tls is False else ())
     )
-    extra_environment = {'MYSQL_PWD': password} if password else None
+    environment = dict(os.environ)
 
-    logger.debug(f"{log_prefix}: Restoring MariaDB database {data_source['name']}{dry_run_label}")
+    logger.debug(f"Restoring MariaDB database {data_source['name']}{dry_run_label}")
     if dry_run:
         return
 
@@ -299,5 +407,5 @@ def restore_data_source_dump(
         [extract_process],
         output_log_level=logging.DEBUG,
         input_file=extract_process.stdout,
-        extra_environment=extra_environment,
+        environment=environment,
     )

borgmatic/hooks/data_source/mongodb.py

@@ -4,6 +4,7 @@ import shlex
 
 import borgmatic.borg.pattern
 import borgmatic.config.paths
+import borgmatic.hooks.credential.parse
 from borgmatic.execute import execute_command, execute_command_with_processes
 from borgmatic.hooks.data_source import dump
 
@@ -17,14 +18,14 @@ def make_dump_path(base_directory):  # pragma: no cover
     return dump.make_data_source_dump_path(base_directory, 'mongodb_databases')
 
 
-def get_default_port(databases, config, log_prefix):  # pragma: no cover
+def get_default_port(databases, config):  # pragma: no cover
     return 27017
 
 
-def use_streaming(databases, config, log_prefix):
+def use_streaming(databases, config):
     '''
-    Given a sequence of MongoDB database configuration dicts, a configuration dict (ignored), and a
-    log prefix (ignored), return whether streaming will be using during dumps.
+    Given a sequence of MongoDB database configuration dicts, a configuration dict (ignored), return
+    whether streaming will be using during dumps.
     '''
     return any(database.get('format') != 'directory' for database in databases)
 
@@ -32,7 +33,6 @@ def use_streaming(databases, config, log_prefix):
 def dump_data_sources(
     databases,
     config,
-    log_prefix,
     config_paths,
     borgmatic_runtime_directory,
     patterns,
@@ -41,8 +41,7 @@ def dump_data_sources(
     '''
     Dump the given MongoDB databases to a named pipe. The databases are supplied as a sequence of
     dicts, one dict describing each database as per the configuration schema. Use the borgmatic
-    runtime directory to construct the destination path (used for the directory format and the given
-    log prefix in any log entries.
+    runtime directory to construct the destination path (used for the directory format.
 
     Return a sequence of subprocess.Popen instances for the dump processes ready to spew to a named
     pipe. But if this is a dry run, then don't actually dump anything and return an empty sequence.
@@ -51,9 +50,10 @@ def dump_data_sources(
     '''
     dry_run_label = ' (dry run; not actually dumping anything)' if dry_run else ''
 
-    logger.info(f'{log_prefix}: Dumping MongoDB databases{dry_run_label}')
+    logger.info(f'Dumping MongoDB databases{dry_run_label}')
 
     processes = []
+
     for database in databases:
         name = database['name']
         dump_filename = dump.make_data_source_dump_filename(
@@ -65,12 +65,12 @@ def dump_data_sources(
         dump_format = database.get('format', 'archive')
 
         logger.debug(
-            f'{log_prefix}: Dumping MongoDB database {name} to {dump_filename}{dry_run_label}',
+            f'Dumping MongoDB database {name} to {dump_filename}{dry_run_label}',
         )
         if dry_run:
             continue
 
-        command = build_dump_command(database, dump_filename, dump_format)
+        command = build_dump_command(database, config, dump_filename, dump_format)
 
         if dump_format == 'directory':
             dump.create_parent_directory_for_dump(dump_filename)
@@ -82,26 +82,65 @@ def dump_data_sources(
     if not dry_run:
         patterns.append(
             borgmatic.borg.pattern.Pattern(
-                os.path.join(borgmatic_runtime_directory, 'mongodb_databases')
+                os.path.join(borgmatic_runtime_directory, 'mongodb_databases'),
+                source=borgmatic.borg.pattern.Pattern_source.HOOK,
             )
         )
 
     return processes
 
 
-def build_dump_command(database, dump_filename, dump_format):
+def make_password_config_file(password):
     '''
-    Return the mongodump command from a single database configuration.
+    Given a database password, write it as a MongoDB configuration file to an anonymous pipe and
+    return its filename. The idea is that this is a more secure way to transmit a password to
+    MongoDB than providing it directly on the command-line.
+
+    Do not use the returned value for multiple different command invocations. That will not work
+    because each pipe is "used up" once read.
+    '''
+    logger.debug('Writing MongoDB password to configuration file pipe')
+
+    read_file_descriptor, write_file_descriptor = os.pipe()
+    os.write(write_file_descriptor, f'password: {password}'.encode('utf-8'))
+    os.close(write_file_descriptor)
+
+    # This plus subprocess.Popen(..., close_fds=False) in execute.py is necessary for the database
+    # client child process to inherit the file descriptor.
+    os.set_inheritable(read_file_descriptor, True)
+
+    return f'/dev/fd/{read_file_descriptor}'
+
+
+def build_dump_command(database, config, dump_filename, dump_format):
+    '''
+    Return the custom mongodump_command from a single database configuration.
     '''
     all_databases = database['name'] == 'all'
 
+    password = borgmatic.hooks.credential.parse.resolve_credential(database.get('password'), config)
+
+    dump_command = tuple(
+        shlex.quote(part) for part in shlex.split(database.get('mongodump_command') or 'mongodump')
+    )
     return (
-        ('mongodump',)
+        dump_command
         + (('--out', shlex.quote(dump_filename)) if dump_format == 'directory' else ())
         + (('--host', shlex.quote(database['hostname'])) if 'hostname' in database else ())
         + (('--port', shlex.quote(str(database['port']))) if 'port' in database else ())
-        + (('--username', shlex.quote(database['username'])) if 'username' in database else ())
-        + (('--password', shlex.quote(database['password'])) if 'password' in database else ())
+        + (
+            (
+                '--username',
+                shlex.quote(
+                    borgmatic.hooks.credential.parse.resolve_credential(
+                        database['username'], config
+                    )
+                ),
+            )
+            if 'username' in database
+            else ()
+        )
+        + (('--config', make_password_config_file(password)) if password else ())
         + (
             ('--authenticationDatabase', shlex.quote(database['authentication_database']))
             if 'authentication_database' in database
@@ -118,25 +157,23 @@ def build_dump_command(database, dump_filename, dump_format):
 
 
 def remove_data_source_dumps(
-    databases, config, log_prefix, borgmatic_runtime_directory, dry_run
+    databases, config, borgmatic_runtime_directory, dry_run
 ):  # pragma: no cover
     '''
     Remove all database dump files for this hook regardless of the given databases. Use the
-    borgmatic_runtime_directory to construct the destination path and the log prefix in any log
-    entries. If this is a dry run, then don't actually remove anything.
+    borgmatic_runtime_directory to construct the destination path. If this is a dry run, then don't
+    actually remove anything.
     '''
-    dump.remove_data_source_dumps(
-        make_dump_path(borgmatic_runtime_directory), 'MongoDB', log_prefix, dry_run
-    )
+    dump.remove_data_source_dumps(make_dump_path(borgmatic_runtime_directory), 'MongoDB', dry_run)
 
 
 def make_data_source_dump_patterns(
-    databases, config, log_prefix, borgmatic_runtime_directory, name=None
+    databases, config, borgmatic_runtime_directory, name=None
 ):  # pragma: no cover
     '''
-    Given a sequence of configurations dicts, a configuration dict, a prefix to log with, the
-    borgmatic runtime directory, and a database name to match, return the corresponding glob
-    patterns to match the database dump in an archive.
+    Given a sequence of configurations dicts, a configuration dict, the borgmatic runtime directory,
+    and a database name to match, return the corresponding glob patterns to match the database dump
+    in an archive.
     '''
     borgmatic_source_directory = borgmatic.config.paths.get_borgmatic_source_directory(config)
 
@@ -154,7 +191,6 @@ def make_data_source_dump_patterns(
 def restore_data_source_dump(
     hook_config,
     config,
-    log_prefix,
     data_source,
     dry_run,
     extract_process,
@@ -164,9 +200,9 @@ def restore_data_source_dump(
     '''
     Restore a database from the given extract stream. The database is supplied as a data source
     configuration dict, but the given hook configuration is ignored. The given configuration dict is
-    used to construct the destination path, and the given log prefix is used for any log entries. If
-    this is a dry run, then don't actually restore anything. Trigger the given active extract
-    process (an instance of subprocess.Popen) to produce output to consume.
+    used to construct the destination path. If this is a dry run, then don't actually restore
+    anything. Trigger the given active extract process (an instance of subprocess.Popen) to produce
+    output to consume.
 
     If the extract process is None, then restore the dump from the filesystem rather than from an
     extract stream.
@@ -178,10 +214,10 @@ def restore_data_source_dump(
         data_source.get('hostname'),
     )
     restore_command = build_restore_command(
-        extract_process, data_source, dump_filename, connection_params
+        extract_process, data_source, config, dump_filename, connection_params
     )
 
-    logger.debug(f"{log_prefix}: Restoring MongoDB database {data_source['name']}{dry_run_label}")
+    logger.debug(f"Restoring MongoDB database {data_source['name']}{dry_run_label}")
     if dry_run:
         return
 
@@ -195,22 +231,33 @@ def restore_data_source_dump(
     )
 
 
-def build_restore_command(extract_process, database, dump_filename, connection_params):
+def build_restore_command(extract_process, database, config, dump_filename, connection_params):
     '''
-    Return the mongorestore command from a single database configuration.
+    Return the custom mongorestore_command from a single database configuration.
     '''
     hostname = connection_params['hostname'] or database.get(
         'restore_hostname', database.get('hostname')
     )
     port = str(connection_params['port'] or database.get('restore_port', database.get('port', '')))
-    username = connection_params['username'] or database.get(
-        'restore_username', database.get('username')
+    username = borgmatic.hooks.credential.parse.resolve_credential(
+        (
+            connection_params['username']
+            or database.get('restore_username', database.get('username'))
+        ),
+        config,
     )
-    password = connection_params['password'] or database.get(
-        'restore_password', database.get('password')
+    password = borgmatic.hooks.credential.parse.resolve_credential(
+        (
+            connection_params['password']
+            or database.get('restore_password', database.get('password'))
+        ),
+        config,
     )
 
-    command = ['mongorestore']
+    command = list(
+        shlex.quote(part)
+        for part in shlex.split(database.get('mongorestore_command') or 'mongorestore')
+    )
     if extract_process:
         command.append('--archive')
     else:
@@ -224,7 +271,7 @@ def build_restore_command(extract_process, database, dump_filename, connection_p
     if username:
         command.extend(('--username', username))
     if password:
-        command.extend(('--password', password))
+        command.extend(('--config', make_password_config_file(password)))
     if 'authentication_database' in database:
         command.extend(('--authenticationDatabase', database['authentication_database']))
     if 'restore_options' in database:

borgmatic/hooks/data_source/mysql.py

@@ -5,6 +5,8 @@ import shlex
 
 import borgmatic.borg.pattern
 import borgmatic.config.paths
+import borgmatic.hooks.credential.parse
+import borgmatic.hooks.data_source.mariadb
 from borgmatic.execute import (
     execute_command,
     execute_command_and_capture_output,
@@ -25,11 +27,12 @@ def make_dump_path(base_directory):  # pragma: no cover
 SYSTEM_DATABASE_NAMES = ('information_schema', 'mysql', 'performance_schema', 'sys')
 
 
-def database_names_to_dump(database, extra_environment, log_prefix, dry_run):
+def database_names_to_dump(database, config, username, password, environment, dry_run):
     '''
-    Given a requested database config, return the corresponding sequence of database names to dump.
-    In the case of "all", query for the names of databases on the configured host and return them,
-    excluding any system databases that will cause problems during restore.
+    Given a requested database config, a configuration dict, a database username and password, an
+    environment dict, and whether this is a dry run, return the corresponding sequence of database
+    names to dump. In the case of "all", query for the names of databases on the configured host and
+    return them, excluding any system databases that will cause problems during restore.
     '''
     if database['name'] != 'all':
         return (database['name'],)
@@ -39,20 +42,27 @@ def database_names_to_dump(database, extra_environment, log_prefix, dry_run):
     mysql_show_command = tuple(
         shlex.quote(part) for part in shlex.split(database.get('mysql_command') or 'mysql')
     )
+    extra_options, defaults_extra_filename = (
+        borgmatic.hooks.data_source.mariadb.parse_extra_options(database.get('list_options'))
+    )
     show_command = (
         mysql_show_command
-        + (tuple(database['list_options'].split(' ')) if 'list_options' in database else ())
+        + borgmatic.hooks.data_source.mariadb.make_defaults_file_options(
+            username, password, defaults_extra_filename
+        )
+        + extra_options
         + (('--host', database['hostname']) if 'hostname' in database else ())
         + (('--port', str(database['port'])) if 'port' in database else ())
         + (('--protocol', 'tcp') if 'hostname' in database or 'port' in database else ())
-        + (('--user', database['username']) if 'username' in database else ())
+        + (('--ssl',) if database.get('tls') is True else ())
+        + (('--skip-ssl',) if database.get('tls') is False else ())
         + ('--skip-column-names', '--batch')
         + ('--execute', 'show schemas')
     )
-    logger.debug(f'{log_prefix}: Querying for "all" MySQL databases to dump')
-    show_output = execute_command_and_capture_output(
-        show_command, extra_environment=extra_environment
-    )
+
+    logger.debug('Querying for "all" MySQL databases to dump')
+
+    show_output = execute_command_and_capture_output(show_command, environment=environment)
 
     return tuple(
         show_name
@@ -62,12 +72,19 @@ def database_names_to_dump(database, extra_environment, log_prefix, dry_run):
 
 
 def execute_dump_command(
-    database, log_prefix, dump_path, database_names, extra_environment, dry_run, dry_run_label
+    database,
+    config,
+    username,
+    password,
+    dump_path,
+    database_names,
+    environment,
+    dry_run,
+    dry_run_label,
 ):
     '''
     Kick off a dump for the given MySQL/MariaDB database (provided as a configuration dict) to a
-    named pipe constructed from the given dump path and database name. Use the given log prefix in
-    any log entries.
+    named pipe constructed from the given dump path and database name.
 
     Return a subprocess.Popen instance for the dump process ready to spew to a named pipe. But if
     this is a dry run, then don't actually dump anything and return None.
@@ -82,29 +99,34 @@ def execute_dump_command(
 
     if os.path.exists(dump_filename):
         logger.warning(
-            f'{log_prefix}: Skipping duplicate dump of MySQL database "{database_name}" to {dump_filename}'
+            f'Skipping duplicate dump of MySQL database "{database_name}" to {dump_filename}'
         )
         return None
 
     mysql_dump_command = tuple(
         shlex.quote(part) for part in shlex.split(database.get('mysql_dump_command') or 'mysqldump')
     )
+    extra_options, defaults_extra_filename = (
+        borgmatic.hooks.data_source.mariadb.parse_extra_options(database.get('options'))
+    )
     dump_command = (
         mysql_dump_command
-        + (tuple(database['options'].split(' ')) if 'options' in database else ())
+        + borgmatic.hooks.data_source.mariadb.make_defaults_file_options(
+            username, password, defaults_extra_filename
+        )
+        + extra_options
         + (('--add-drop-database',) if database.get('add_drop_database', True) else ())
         + (('--host', database['hostname']) if 'hostname' in database else ())
         + (('--port', str(database['port'])) if 'port' in database else ())
         + (('--protocol', 'tcp') if 'hostname' in database or 'port' in database else ())
-        + (('--user', database['username']) if 'username' in database else ())
+        + (('--ssl',) if database.get('tls') is True else ())
+        + (('--skip-ssl',) if database.get('tls') is False else ())
         + ('--databases',)
         + database_names
         + ('--result-file', dump_filename)
     )
 
-    logger.debug(
-        f'{log_prefix}: Dumping MySQL database "{database_name}" to {dump_filename}{dry_run_label}'
-    )
+    logger.debug(f'Dumping MySQL database "{database_name}" to {dump_filename}{dry_run_label}')
     if dry_run:
         return None
 
@@ -112,19 +134,19 @@ def execute_dump_command(
 
     return execute_command(
         dump_command,
-        extra_environment=extra_environment,
+        environment=environment,
         run_to_completion=False,
     )
 
 
-def get_default_port(databases, config, log_prefix):  # pragma: no cover
+def get_default_port(databases, config):  # pragma: no cover
     return 3306
 
 
-def use_streaming(databases, config, log_prefix):
+def use_streaming(databases, config):
     '''
-    Given a sequence of MySQL database configuration dicts, a configuration dict (ignored), and a
-    log prefix (ignored), return whether streaming will be using during dumps.
+    Given a sequence of MySQL database configuration dicts, a configuration dict (ignored), return
+    whether streaming will be using during dumps.
     '''
     return any(databases)
 
@@ -132,7 +154,6 @@ def use_streaming(databases, config, log_prefix):
 def dump_data_sources(
     databases,
     config,
-    log_prefix,
     config_paths,
     borgmatic_runtime_directory,
     patterns,
@@ -141,8 +162,7 @@ def dump_data_sources(
     '''
     Dump the given MySQL/MariaDB databases to a named pipe. The databases are supplied as a sequence
     of dicts, one dict describing each database as per the configuration schema. Use the given
-    borgmatic runtime directory to construct the destination path and the given log prefix in any
-    log entries.
+    borgmatic runtime directory to construct the destination path.
 
     Return a sequence of subprocess.Popen instances for the dump processes ready to spew to a named
     pipe. But if this is a dry run, then don't actually dump anything and return an empty sequence.
@@ -152,13 +172,19 @@ def dump_data_sources(
     dry_run_label = ' (dry run; not actually dumping anything)' if dry_run else ''
     processes = []
 
-    logger.info(f'{log_prefix}: Dumping MySQL databases{dry_run_label}')
+    logger.info(f'Dumping MySQL databases{dry_run_label}')
 
     for database in databases:
         dump_path = make_dump_path(borgmatic_runtime_directory)
-        extra_environment = {'MYSQL_PWD': database['password']} if 'password' in database else None
+        username = borgmatic.hooks.credential.parse.resolve_credential(
+            database.get('username'), config
+        )
+        password = borgmatic.hooks.credential.parse.resolve_credential(
+            database.get('password'), config
+        )
+        environment = dict(os.environ)
         dump_database_names = database_names_to_dump(
-            database, extra_environment, log_prefix, dry_run
+            database, config, username, password, environment, dry_run
         )
 
         if not dump_database_names:
@@ -174,10 +200,12 @@ def dump_data_sources(
                 processes.append(
                     execute_dump_command(
                         renamed_database,
-                        log_prefix,
+                        config,
+                        username,
+                        password,
                         dump_path,
                         (dump_name,),
-                        extra_environment,
+                        environment,
                         dry_run,
                         dry_run_label,
                     )
@@ -186,10 +214,12 @@ def dump_data_sources(
             processes.append(
                 execute_dump_command(
                     database,
-                    log_prefix,
+                    config,
+                    username,
+                    password,
                     dump_path,
                     dump_database_names,
-                    extra_environment,
+                    environment,
                     dry_run,
                     dry_run_label,
                 )
@@ -198,7 +228,8 @@ def dump_data_sources(
     if not dry_run:
         patterns.append(
             borgmatic.borg.pattern.Pattern(
-                os.path.join(borgmatic_runtime_directory, 'mysql_databases')
+                os.path.join(borgmatic_runtime_directory, 'mysql_databases'),
+                source=borgmatic.borg.pattern.Pattern_source.HOOK,
             )
         )
 
@@ -206,25 +237,23 @@ def dump_data_sources(
 
 
 def remove_data_source_dumps(
-    databases, config, log_prefix, borgmatic_runtime_directory, dry_run
+    databases, config, borgmatic_runtime_directory, dry_run
 ):  # pragma: no cover
     '''
     Remove all database dump files for this hook regardless of the given databases. Use the
-    borgmatic runtime directory to construct the destination path and the log prefix in any log
-    entries. If this is a dry run, then don't actually remove anything.
+    borgmatic runtime directory to construct the destination path. If this is a dry run, then don't
+    actually remove anything.
     '''
-    dump.remove_data_source_dumps(
-        make_dump_path(borgmatic_runtime_directory), 'MySQL', log_prefix, dry_run
-    )
+    dump.remove_data_source_dumps(make_dump_path(borgmatic_runtime_directory), 'MySQL', dry_run)
 
 
 def make_data_source_dump_patterns(
-    databases, config, log_prefix, borgmatic_runtime_directory, name=None
+    databases, config, borgmatic_runtime_directory, name=None
 ):  # pragma: no cover
     '''
-    Given a sequence of configurations dicts, a configuration dict, a prefix to log with, the
-    borgmatic runtime directory, and a database name to match, return the corresponding glob
-    patterns to match the database dump in an archive.
+    Given a sequence of configurations dicts, a configuration dict, the borgmatic runtime directory,
+    and a database name to match, return the corresponding glob patterns to match the database dump
+    in an archive.
     '''
     borgmatic_source_directory = borgmatic.config.paths.get_borgmatic_source_directory(config)
 
@@ -242,7 +271,6 @@ def make_data_source_dump_patterns(
 def restore_data_source_dump(
     hook_config,
     config,
-    log_prefix,
     data_source,
     dry_run,
     extract_process,
@@ -251,9 +279,9 @@ def restore_data_source_dump(
 ):
     '''
     Restore a database from the given extract stream. The database is supplied as a data source
-    configuration dict, but the given hook configuration is ignored. The given log prefix is used
-    for any log entries. If this is a dry run, then don't actually restore anything. Trigger the
-    given active extract process (an instance of subprocess.Popen) to produce output to consume.
+    configuration dict, but the given hook configuration is ignored. If this is a dry run, then
+    don't actually restore anything. Trigger the given active extract process (an instance of
+    subprocess.Popen) to produce output to consume.
     '''
     dry_run_label = ' (dry run; not actually restoring anything)' if dry_run else ''
     hostname = connection_params['hostname'] or data_source.get(
@@ -262,32 +290,44 @@ def restore_data_source_dump(
     port = str(
         connection_params['port'] or data_source.get('restore_port', data_source.get('port', ''))
     )
-    username = connection_params['username'] or data_source.get(
-        'restore_username', data_source.get('username')
+    tls = data_source.get('restore_tls', data_source.get('tls'))
+    username = borgmatic.hooks.credential.parse.resolve_credential(
+        (
+            connection_params['username']
+            or data_source.get('restore_username', data_source.get('username'))
+        ),
+        config,
     )
-    password = connection_params['password'] or data_source.get(
-        'restore_password', data_source.get('password')
+    password = borgmatic.hooks.credential.parse.resolve_credential(
+        (
+            connection_params['password']
+            or data_source.get('restore_password', data_source.get('password'))
+        ),
+        config,
     )
 
     mysql_restore_command = tuple(
         shlex.quote(part) for part in shlex.split(data_source.get('mysql_command') or 'mysql')
     )
+    extra_options, defaults_extra_filename = (
+        borgmatic.hooks.data_source.mariadb.parse_extra_options(data_source.get('restore_options'))
+    )
     restore_command = (
         mysql_restore_command
-        + ('--batch',)
-        + (
-            tuple(data_source['restore_options'].split(' '))
-            if 'restore_options' in data_source
-            else ()
+        + borgmatic.hooks.data_source.mariadb.make_defaults_file_options(
+            username, password, defaults_extra_filename
         )
+        + extra_options
+        + ('--batch',)
         + (('--host', hostname) if hostname else ())
         + (('--port', str(port)) if port else ())
         + (('--protocol', 'tcp') if hostname or port else ())
-        + (('--user', username) if username else ())
+        + (('--ssl',) if tls is True else ())
+        + (('--skip-ssl',) if tls is False else ())
     )
-    extra_environment = {'MYSQL_PWD': password} if password else None
+    environment = dict(os.environ)
 
-    logger.debug(f"{log_prefix}: Restoring MySQL database {data_source['name']}{dry_run_label}")
+    logger.debug(f"Restoring MySQL database {data_source['name']}{dry_run_label}")
     if dry_run:
         return
 
@@ -298,5 +338,5 @@ def restore_data_source_dump(
         [extract_process],
         output_log_level=logging.DEBUG,
         input_file=extract_process.stdout,
-        extra_environment=extra_environment,
+        environment=environment,
     )

borgmatic/hooks/data_source/postgresql.py

@@ -7,6 +7,7 @@ import shlex
 
 import borgmatic.borg.pattern
 import borgmatic.config.paths
+import borgmatic.hooks.credential.parse
 from borgmatic.execute import (
     execute_command,
     execute_command_and_capture_output,
@@ -24,46 +25,52 @@ def make_dump_path(base_directory):  # pragma: no cover
     return dump.make_data_source_dump_path(base_directory, 'postgresql_databases')
 
 
-def make_extra_environment(database, restore_connection_params=None):
+def make_environment(database, config, restore_connection_params=None):
     '''
-    Make the extra_environment dict from the given database configuration. If restore connection
-    params are given, this is for a restore operation.
+    Make an environment dict from the current environment variables and the given database
+    configuration. If restore connection params are given, this is for a restore operation.
     '''
-    extra = dict()
+    environment = dict(os.environ)
 
     try:
         if restore_connection_params:
-            extra['PGPASSWORD'] = restore_connection_params.get('password') or database.get(
-                'restore_password', database['password']
+            environment['PGPASSWORD'] = borgmatic.hooks.credential.parse.resolve_credential(
+                (
+                    restore_connection_params.get('password')
+                    or database.get('restore_password', database['password'])
+                ),
+                config,
             )
         else:
-            extra['PGPASSWORD'] = database['password']
+            environment['PGPASSWORD'] = borgmatic.hooks.credential.parse.resolve_credential(
+                database['password'], config
+            )
     except (AttributeError, KeyError):
         pass
 
     if 'ssl_mode' in database:
-        extra['PGSSLMODE'] = database['ssl_mode']
+        environment['PGSSLMODE'] = database['ssl_mode']
     if 'ssl_cert' in database:
-        extra['PGSSLCERT'] = database['ssl_cert']
+        environment['PGSSLCERT'] = database['ssl_cert']
     if 'ssl_key' in database:
-        extra['PGSSLKEY'] = database['ssl_key']
+        environment['PGSSLKEY'] = database['ssl_key']
     if 'ssl_root_cert' in database:
-        extra['PGSSLROOTCERT'] = database['ssl_root_cert']
+        environment['PGSSLROOTCERT'] = database['ssl_root_cert']
     if 'ssl_crl' in database:
-        extra['PGSSLCRL'] = database['ssl_crl']
+        environment['PGSSLCRL'] = database['ssl_crl']
 
-    return extra
+    return environment
 
 
 EXCLUDED_DATABASE_NAMES = ('template0', 'template1')
 
 
-def database_names_to_dump(database, extra_environment, log_prefix, dry_run):
+def database_names_to_dump(database, config, environment, dry_run):
     '''
-    Given a requested database config, return the corresponding sequence of database names to dump.
-    In the case of "all" when a database format is given, query for the names of databases on the
-    configured host and return them. For "all" without a database format, just return a sequence
-    containing "all".
+    Given a requested database config and a configuration dict, return the corresponding sequence of
+    database names to dump. In the case of "all" when a database format is given, query for the
+    names of databases on the configured host and return them. For "all" without a database format,
+    just return a sequence containing "all".
     '''
     requested_name = database['name']
 
@@ -82,13 +89,18 @@ def database_names_to_dump(database, extra_environment, log_prefix, dry_run):
         + ('--list', '--no-password', '--no-psqlrc', '--csv', '--tuples-only')
         + (('--host', database['hostname']) if 'hostname' in database else ())
         + (('--port', str(database['port'])) if 'port' in database else ())
-        + (('--username', database['username']) if 'username' in database else ())
+        + (
+            (
+                '--username',
+                borgmatic.hooks.credential.parse.resolve_credential(database['username'], config),
+            )
+            if 'username' in database
+            else ()
+        )
         + (tuple(database['list_options'].split(' ')) if 'list_options' in database else ())
     )
-    logger.debug(f'{log_prefix}: Querying for "all" PostgreSQL databases to dump')
-    list_output = execute_command_and_capture_output(
-        list_command, extra_environment=extra_environment
-    )
+    logger.debug('Querying for "all" PostgreSQL databases to dump')
+    list_output = execute_command_and_capture_output(list_command, environment=environment)
 
     return tuple(
         row[0]
@@ -97,14 +109,14 @@ def database_names_to_dump(database, extra_environment, log_prefix, dry_run):
     )
 
 
-def get_default_port(databases, config, log_prefix):  # pragma: no cover
+def get_default_port(databases, config):  # pragma: no cover
     return 5432
 
 
-def use_streaming(databases, config, log_prefix):
+def use_streaming(databases, config):
     '''
-    Given a sequence of PostgreSQL database configuration dicts, a configuration dict (ignored), and
-    a log prefix (ignored), return whether streaming will be using during dumps.
+    Given a sequence of PostgreSQL database configuration dicts, a configuration dict (ignored),
+    return whether streaming will be using during dumps.
     '''
     return any(database.get('format') != 'directory' for database in databases)
 
@@ -112,7 +124,6 @@ def use_streaming(databases, config, log_prefix):
 def dump_data_sources(
     databases,
     config,
-    log_prefix,
     config_paths,
     borgmatic_runtime_directory,
     patterns,
@@ -121,8 +132,7 @@ def dump_data_sources(
     '''
     Dump the given PostgreSQL databases to a named pipe. The databases are supplied as a sequence of
     dicts, one dict describing each database as per the configuration schema. Use the given
-    borgmatic runtime directory to construct the destination path and the given log prefix in any
-    log entries.
+    borgmatic runtime directory to construct the destination path.
 
     Return a sequence of subprocess.Popen instances for the dump processes ready to spew to a named
     pipe. But if this is a dry run, then don't actually dump anything and return an empty sequence.
@@ -134,14 +144,12 @@ def dump_data_sources(
     dry_run_label = ' (dry run; not actually dumping anything)' if dry_run else ''
     processes = []
 
-    logger.info(f'{log_prefix}: Dumping PostgreSQL databases{dry_run_label}')
+    logger.info(f'Dumping PostgreSQL databases{dry_run_label}')
 
     for database in databases:
-        extra_environment = make_extra_environment(database)
+        environment = make_environment(database, config)
         dump_path = make_dump_path(borgmatic_runtime_directory)
-        dump_database_names = database_names_to_dump(
-            database, extra_environment, log_prefix, dry_run
-        )
+        dump_database_names = database_names_to_dump(database, config, environment, dry_run)
 
         if not dump_database_names:
             if dry_run:
@@ -151,6 +159,7 @@ def dump_data_sources(
 
         for database_name in dump_database_names:
             dump_format = database.get('format', None if database_name == 'all' else 'custom')
+            compression = database.get('compression')
             default_dump_command = 'pg_dumpall' if database_name == 'all' else 'pg_dump'
             dump_command = tuple(
                 shlex.quote(part)
@@ -164,7 +173,7 @@ def dump_data_sources(
             )
             if os.path.exists(dump_filename):
                 logger.warning(
-                    f'{log_prefix}: Skipping duplicate dump of PostgreSQL database "{database_name}" to {dump_filename}'
+                    f'Skipping duplicate dump of PostgreSQL database "{database_name}" to {dump_filename}'
                 )
                 continue
 
@@ -178,12 +187,20 @@ def dump_data_sources(
                 + (('--host', shlex.quote(database['hostname'])) if 'hostname' in database else ())
                 + (('--port', shlex.quote(str(database['port']))) if 'port' in database else ())
                 + (
-                    ('--username', shlex.quote(database['username']))
+                    (
+                        '--username',
+                        shlex.quote(
+                            borgmatic.hooks.credential.parse.resolve_credential(
+                                database['username'], config
+                            )
+                        ),
+                    )
                     if 'username' in database
                     else ()
                 )
                 + (('--no-owner',) if database.get('no_owner', False) else ())
                 + (('--format', shlex.quote(dump_format)) if dump_format else ())
+                + (('--compress', shlex.quote(str(compression))) if compression is not None else ())
                 + (('--file', shlex.quote(dump_filename)) if dump_format == 'directory' else ())
                 + (
                     tuple(shlex.quote(option) for option in database['options'].split(' '))
@@ -198,7 +215,7 @@ def dump_data_sources(
             )
 
             logger.debug(
-                f'{log_prefix}: Dumping PostgreSQL database "{database_name}" to {dump_filename}{dry_run_label}'
+                f'Dumping PostgreSQL database "{database_name}" to {dump_filename}{dry_run_label}'
             )
             if dry_run:
                 continue
@@ -208,7 +225,7 @@ def dump_data_sources(
                 execute_command(
                     command,
                     shell=True,
-                    extra_environment=extra_environment,
+                    environment=environment,
                 )
             else:
                 dump.create_named_pipe_for_dump(dump_filename)
@@ -216,7 +233,7 @@ def dump_data_sources(
                     execute_command(
                         command,
                         shell=True,
-                        extra_environment=extra_environment,
+                        environment=environment,
                         run_to_completion=False,
                     )
                 )
@@ -224,7 +241,8 @@ def dump_data_sources(
     if not dry_run:
         patterns.append(
             borgmatic.borg.pattern.Pattern(
-                os.path.join(borgmatic_runtime_directory, 'postgresql_databases')
+                os.path.join(borgmatic_runtime_directory, 'postgresql_databases'),
+                source=borgmatic.borg.pattern.Pattern_source.HOOK,
             )
         )
 
@@ -232,25 +250,25 @@ def dump_data_sources(
 
 
 def remove_data_source_dumps(
-    databases, config, log_prefix, borgmatic_runtime_directory, dry_run
+    databases, config, borgmatic_runtime_directory, dry_run
 ):  # pragma: no cover
     '''
     Remove all database dump files for this hook regardless of the given databases. Use the
-    borgmatic runtime directory to construct the destination path and the log prefix in any log
-    entries. If this is a dry run, then don't actually remove anything.
+    borgmatic runtime directory to construct the destination path. If this is a dry run, then don't
+    actually remove anything.
     '''
     dump.remove_data_source_dumps(
-        make_dump_path(borgmatic_runtime_directory), 'PostgreSQL', log_prefix, dry_run
+        make_dump_path(borgmatic_runtime_directory), 'PostgreSQL', dry_run
     )
 
 
 def make_data_source_dump_patterns(
-    databases, config, log_prefix, borgmatic_runtime_directory, name=None
+    databases, config, borgmatic_runtime_directory, name=None
 ):  # pragma: no cover
     '''
-    Given a sequence of configurations dicts, a configuration dict, a prefix to log with, the
-    borgmatic runtime directory, and a database name to match, return the corresponding glob
-    patterns to match the database dump in an archive.
+    Given a sequence of configurations dicts, a configuration dict, the borgmatic runtime directory,
+    and a database name to match, return the corresponding glob patterns to match the database dump
+    in an archive.
     '''
     borgmatic_source_directory = borgmatic.config.paths.get_borgmatic_source_directory(config)
 
@@ -268,7 +286,6 @@ def make_data_source_dump_patterns(
 def restore_data_source_dump(
     hook_config,
     config,
-    log_prefix,
     data_source,
     dry_run,
     extract_process,
@@ -278,10 +295,9 @@ def restore_data_source_dump(
     '''
     Restore a database from the given extract stream. The database is supplied as a data source
     configuration dict, but the given hook configuration is ignored. The given borgmatic runtime
-    directory is used to construct the destination path (used for the directory format), and the
-    given log prefix is used for any log entries. If this is a dry run, then don't actually restore
-    anything. Trigger the given active extract process (an instance of subprocess.Popen) to produce
-    output to consume.
+    directory is used to construct the destination path (used for the directory format). If this is
+    a dry run, then don't actually restore anything. Trigger the given active extract process (an
+    instance of subprocess.Popen) to produce output to consume.
 
     If the extract process is None, then restore the dump from the filesystem rather than from an
     extract stream.
@@ -296,8 +312,12 @@ def restore_data_source_dump(
     port = str(
         connection_params['port'] or data_source.get('restore_port', data_source.get('port', ''))
     )
-    username = connection_params['username'] or data_source.get(
-        'restore_username', data_source.get('username')
+    username = borgmatic.hooks.credential.parse.resolve_credential(
+        (
+            connection_params['username']
+            or data_source.get('restore_username', data_source.get('username'))
+        ),
+        config,
     )
 
     all_databases = bool(data_source['name'] == 'all')
@@ -350,13 +370,9 @@ def restore_data_source_dump(
         )
     )
 
-    extra_environment = make_extra_environment(
-        data_source, restore_connection_params=connection_params
-    )
+    environment = make_environment(data_source, config, restore_connection_params=connection_params)
 
-    logger.debug(
-        f"{log_prefix}: Restoring PostgreSQL database {data_source['name']}{dry_run_label}"
-    )
+    logger.debug(f"Restoring PostgreSQL database {data_source['name']}{dry_run_label}")
     if dry_run:
         return
 
@@ -367,6 +383,6 @@ def restore_data_source_dump(
         [extract_process] if extract_process else [],
         output_log_level=logging.DEBUG,
         input_file=extract_process.stdout if extract_process else None,
-        extra_environment=extra_environment,
+        environment=environment,
     )
-    execute_command(analyze_command, extra_environment=extra_environment)
+    execute_command(analyze_command, environment=environment)

borgmatic/hooks/data_source/snapshot.py

@@ -1,3 +1,4 @@
+import os
 import pathlib
 
 IS_A_HOOK = False
@@ -7,14 +8,18 @@ def get_contained_patterns(parent_directory, candidate_patterns):
     '''
     Given a parent directory and a set of candidate patterns potentially inside it, get the subset
     of contained patterns for which the parent directory is actually the parent, a grandparent, the
-    very same directory, etc. The idea is if, say, /var/log and /var/lib are candidate pattern
-    paths, but there's a parent directory (logical volume, dataset, subvolume, etc.) at /var, then
-    /var is what we want to snapshot.
+    very same directory, etc. The idea is if, say, "/var/log" and "/var/lib" are candidate pattern
+    paths, but there's a parent directory (logical volume, dataset, subvolume, etc.) at "/var", then
+    "/var" is what we want to snapshot.
 
-    For this to work, a candidate pattern path can't have any globs or other non-literal characters
-    in the initial portion of the path that matches the parent directory. For instance, a parent
-    directory of /var would match a candidate pattern path of /var/log/*/data, but not a pattern
-    path like /v*/log/*/data.
+    If a parent directory and a candidate pattern are on different devices, skip the pattern. That's
+    because any snapshot of a parent directory won't actually include "contained" directories if
+    they reside on separate devices.
+
+    For this function to work, a candidate pattern path can't have any globs or other non-literal
+    characters in the initial portion of the path that matches the parent directory. For instance, a
+    parent directory of "/var" would match a candidate pattern path of "/var/log/*/data", but not a
+    pattern path like "/v*/log/*/data".
 
     The one exception is that if a regular expression pattern path starts with "^", that will get
     stripped off for purposes of matching against a parent directory.
@@ -27,12 +32,17 @@ def get_contained_patterns(parent_directory, candidate_patterns):
     if not candidate_patterns:
         return ()
 
+    parent_device = os.stat(parent_directory).st_dev if os.path.exists(parent_directory) else None
+
     contained_patterns = tuple(
         candidate
         for candidate in candidate_patterns
         for candidate_path in (pathlib.PurePath(candidate.path.lstrip('^')),)
-        if pathlib.PurePath(parent_directory) == candidate_path
-        or pathlib.PurePath(parent_directory) in candidate_path.parents
+        if (
+            pathlib.PurePath(parent_directory) == candidate_path
+            or pathlib.PurePath(parent_directory) in candidate_path.parents
+        )
+        if candidate.device == parent_device
     )
     candidate_patterns -= set(contained_patterns)
 

borgmatic/hooks/data_source/sqlite.py

@@ -17,14 +17,14 @@ def make_dump_path(base_directory):  # pragma: no cover
     return dump.make_data_source_dump_path(base_directory, 'sqlite_databases')
 
 
-def get_default_port(databases, config, log_prefix):  # pragma: no cover
+def get_default_port(databases, config):  # pragma: no cover
     return None  # SQLite doesn't use a port.
 
 
-def use_streaming(databases, config, log_prefix):
+def use_streaming(databases, config):
     '''
-    Given a sequence of SQLite database configuration dicts, a configuration dict (ignored), and a
-    log prefix (ignored), return whether streaming will be using during dumps.
+    Given a sequence of SQLite database configuration dicts, a configuration dict (ignored), return
+    whether streaming will be using during dumps.
     '''
     return any(databases)
 
@@ -32,7 +32,6 @@ def use_streaming(databases, config, log_prefix):
 def dump_data_sources(
     databases,
     config,
-    log_prefix,
     config_paths,
     borgmatic_runtime_directory,
     patterns,
@@ -41,7 +40,7 @@ def dump_data_sources(
     '''
     Dump the given SQLite databases to a named pipe. The databases are supplied as a sequence of
     configuration dicts, as per the configuration schema. Use the given borgmatic runtime directory
-    to construct the destination path and the given log prefix in any log entries.
+    to construct the destination path.
 
     Return a sequence of subprocess.Popen instances for the dump processes ready to spew to a named
     pipe. But if this is a dry run, then don't actually dump anything and return an empty sequence.
@@ -51,7 +50,7 @@ def dump_data_sources(
     dry_run_label = ' (dry run; not actually dumping anything)' if dry_run else ''
     processes = []
 
-    logger.info(f'{log_prefix}: Dumping SQLite databases{dry_run_label}')
+    logger.info(f'Dumping SQLite databases{dry_run_label}')
 
     for database in databases:
         database_path = database['path']
@@ -60,7 +59,7 @@ def dump_data_sources(
             logger.warning('The "all" database name has no meaning for SQLite databases')
         if not os.path.exists(database_path):
             logger.warning(
-                f'{log_prefix}: No SQLite database at {database_path}; an empty database will be created and dumped'
+                f'No SQLite database at {database_path}; an empty database will be created and dumped'
             )
 
         dump_path = make_dump_path(borgmatic_runtime_directory)
@@ -68,19 +67,22 @@ def dump_data_sources(
 
         if os.path.exists(dump_filename):
             logger.warning(
-                f'{log_prefix}: Skipping duplicate dump of SQLite database at {database_path} to {dump_filename}'
+                f'Skipping duplicate dump of SQLite database at {database_path} to {dump_filename}'
             )
             continue
 
-        command = (
-            'sqlite3',
+        sqlite_command = tuple(
+            shlex.quote(part) for part in shlex.split(database.get('sqlite_command') or 'sqlite3')
+        )
+        command = sqlite_command + (
             shlex.quote(database_path),
             '.dump',
             '>',
             shlex.quote(dump_filename),
         )
+
         logger.debug(
-            f'{log_prefix}: Dumping SQLite database at {database_path} to {dump_filename}{dry_run_label}'
+            f'Dumping SQLite database at {database_path} to {dump_filename}{dry_run_label}'
         )
         if dry_run:
             continue
@@ -91,7 +93,8 @@ def dump_data_sources(
     if not dry_run:
         patterns.append(
             borgmatic.borg.pattern.Pattern(
-                os.path.join(borgmatic_runtime_directory, 'sqlite_databases')
+                os.path.join(borgmatic_runtime_directory, 'sqlite_databases'),
+                source=borgmatic.borg.pattern.Pattern_source.HOOK,
             )
         )
 
@@ -99,25 +102,23 @@ def dump_data_sources(
 
 
 def remove_data_source_dumps(
-    databases, config, log_prefix, borgmatic_runtime_directory, dry_run
+    databases, config, borgmatic_runtime_directory, dry_run
 ):  # pragma: no cover
     '''
     Remove all database dump files for this hook regardless of the given databases. Use the
-    borgmatic runtime directory to construct the destination path and the log prefix in any log
-    entries. If this is a dry run, then don't actually remove anything.
+    borgmatic runtime directory to construct the destination path. If this is a dry run, then don't
+    actually remove anything.
     '''
-    dump.remove_data_source_dumps(
-        make_dump_path(borgmatic_runtime_directory), 'SQLite', log_prefix, dry_run
-    )
+    dump.remove_data_source_dumps(make_dump_path(borgmatic_runtime_directory), 'SQLite', dry_run)
 
 
 def make_data_source_dump_patterns(
-    databases, config, log_prefix, borgmatic_runtime_directory, name=None
+    databases, config, borgmatic_runtime_directory, name=None
 ):  # pragma: no cover
     '''
-    Given a sequence of configurations dicts, a configuration dict, a prefix to log with, the
-    borgmatic runtime directory, and a database name to match, return the corresponding glob
-    patterns to match the database dump in an archive.
+    Given a sequence of configurations dicts, a configuration dict, the borgmatic runtime directory,
+    and a database name to match, return the corresponding glob patterns to match the database dump
+    in an archive.
     '''
     borgmatic_source_directory = borgmatic.config.paths.get_borgmatic_source_directory(config)
 
@@ -135,7 +136,6 @@ def make_data_source_dump_patterns(
 def restore_data_source_dump(
     hook_config,
     config,
-    log_prefix,
     data_source,
     dry_run,
     extract_process,
@@ -144,30 +144,30 @@ def restore_data_source_dump(
 ):
     '''
     Restore a database from the given extract stream. The database is supplied as a data source
-    configuration dict, but the given hook configuration is ignored. The given log prefix is used
-    for any log entries. If this is a dry run, then don't actually restore anything. Trigger the
-    given active extract process (an instance of subprocess.Popen) to produce output to consume.
+    configuration dict, but the given hook configuration is ignored. If this is a dry run, then
+    don't actually restore anything. Trigger the given active extract process (an instance of
+    subprocess.Popen) to produce output to consume.
     '''
     dry_run_label = ' (dry run; not actually restoring anything)' if dry_run else ''
     database_path = connection_params['restore_path'] or data_source.get(
         'restore_path', data_source.get('path')
     )
 
-    logger.debug(f'{log_prefix}: Restoring SQLite database at {database_path}{dry_run_label}')
+    logger.debug(f'Restoring SQLite database at {database_path}{dry_run_label}')
     if dry_run:
         return
 
     try:
         os.remove(database_path)
-        logger.warning(f'{log_prefix}: Removed existing SQLite database at {database_path}')
+        logger.warning(f'Removed existing SQLite database at {database_path}')
     except FileNotFoundError:  # pragma: no cover
         pass
 
-    restore_command = (
-        'sqlite3',
-        database_path,
+    sqlite_restore_command = tuple(
+        shlex.quote(part)
+        for part in shlex.split(data_source.get('sqlite_restore_command') or 'sqlite3')
     )
-
+    restore_command = sqlite_restore_command + (shlex.quote(database_path),)
     # Don't give Borg local path so as to error on warnings, as "borg extract" only gives a warning
     # if the restore paths don't exist in the archive.
     execute_command_with_processes(

borgmatic/hooks/data_source/zfs.py

@@ -1,5 +1,6 @@
 import collections
 import glob
+import hashlib
 import logging
 import os
 import shutil
@@ -13,7 +14,7 @@ import borgmatic.hooks.data_source.snapshot
 logger = logging.getLogger(__name__)
 
 
-def use_streaming(hook_config, config, log_prefix):  # pragma: no cover
+def use_streaming(hook_config, config):  # pragma: no cover
     '''
     Return whether dump streaming is used for this hook. (Spoiler: It isn't.)
     '''
@@ -38,6 +39,9 @@ def get_datasets_to_backup(zfs_command, patterns):
     pattern paths represent the requested datasets to snapshot. But also include any datasets tagged
     with a borgmatic-specific user property, whether or not they appear in the patterns.
 
+    Only include datasets that contain at least one root pattern sourced from borgmatic
+    configuration (as opposed to generated elsewhere in borgmatic).
+
     Return the result as a sequence of Dataset instances, sorted by mount point.
     '''
     list_output = borgmatic.execute.execute_command_and_capture_output(
@@ -48,7 +52,7 @@ def get_datasets_to_backup(zfs_command, patterns):
             '-t',
             'filesystem',
             '-o',
-            f'name,mountpoint,{BORGMATIC_USER_PROPERTY}',
+            f'name,mountpoint,canmount,{BORGMATIC_USER_PROPERTY}',
         )
     )
 
@@ -60,7 +64,12 @@ def get_datasets_to_backup(zfs_command, patterns):
             (
                 Dataset(dataset_name, mount_point, (user_property_value == 'auto'), ())
                 for line in list_output.splitlines()
-                for (dataset_name, mount_point, user_property_value) in (line.rstrip().split('\t'),)
+                for (dataset_name, mount_point, can_mount, user_property_value) in (
+                    line.rstrip().split('\t'),
+                )
+                # Skip datasets that are marked "canmount=off", because mounting their snapshots will
+                # result in completely empty mount points—thereby preventing us from backing them up.
+                if can_mount == 'on'
             ),
             key=lambda dataset: dataset.mount_point,
             reverse=True,
@@ -83,7 +92,12 @@ def get_datasets_to_backup(zfs_command, patterns):
                 for contained_patterns in (
                     (
                         (
-                            (borgmatic.borg.pattern.Pattern(dataset.mount_point),)
+                            (
+                                borgmatic.borg.pattern.Pattern(
+                                    dataset.mount_point,
+                                    source=borgmatic.borg.pattern.Pattern_source.HOOK,
+                                ),
+                            )
                             if dataset.auto_backup
                             else ()
                         )
@@ -92,7 +106,12 @@ def get_datasets_to_backup(zfs_command, patterns):
                         )
                     ),
                 )
-                if contained_patterns
+                if dataset.auto_backup
+                or any(
+                    pattern.type == borgmatic.borg.pattern.Pattern_type.ROOT
+                    and pattern.source == borgmatic.borg.pattern.Pattern_source.CONFIG
+                    for pattern in contained_patterns
+                )
             ),
             key=lambda dataset: dataset.mount_point,
         )
@@ -115,7 +134,16 @@ def get_all_dataset_mount_points(zfs_command):
         )
     )
 
-    return tuple(sorted(line.rstrip() for line in list_output.splitlines()))
+    return tuple(
+        sorted(
+            {
+                mount_point
+                for line in list_output.splitlines()
+                for mount_point in (line.rstrip(),)
+                if mount_point != 'none'
+            }
+        )
+    )
 
 
 def snapshot_dataset(zfs_command, full_snapshot_name):  # pragma: no cover
@@ -155,10 +183,14 @@ def mount_snapshot(mount_command, full_snapshot_name, snapshot_mount_path):  # p
     )
 
 
-def make_borg_snapshot_pattern(pattern, normalized_runtime_directory):
+MOUNT_POINT_HASH_LENGTH = 10
+
+
+def make_borg_snapshot_pattern(pattern, dataset, normalized_runtime_directory):
     '''
-    Given a Borg pattern as a borgmatic.borg.pattern.Pattern instance, return a new Pattern with its
-    path rewritten to be in a snapshot directory based on the given runtime directory.
+    Given a Borg pattern as a borgmatic.borg.pattern.Pattern instance and the Dataset containing it,
+    return a new Pattern with its path rewritten to be in a snapshot directory based on both the
+    given runtime directory and the given Dataset's mount point.
 
     Move any initial caret in a regular expression pattern path to the beginning, so as not to break
     the regular expression.
@@ -173,6 +205,10 @@ def make_borg_snapshot_pattern(pattern, normalized_runtime_directory):
     rewritten_path = initial_caret + os.path.join(
         normalized_runtime_directory,
         'zfs_snapshots',
+        # Including this hash prevents conflicts between snapshot patterns for different datasets.
+        # For instance, without this, snapshotting a dataset at /var and another at /var/spool would
+        # result in overlapping snapshot patterns and therefore colliding mount attempts.
+        hashlib.shake_256(dataset.mount_point.encode('utf-8')).hexdigest(MOUNT_POINT_HASH_LENGTH),
         '.',  # Borg 1.4+ "slashdot" hack.
         # Included so that the source directory ends up in the Borg archive at its "original" path.
         pattern.path.lstrip('^').lstrip(os.path.sep),
@@ -183,34 +219,35 @@ def make_borg_snapshot_pattern(pattern, normalized_runtime_directory):
         pattern.type,
         pattern.style,
         pattern.device,
+        source=borgmatic.borg.pattern.Pattern_source.HOOK,
     )
 
 
 def dump_data_sources(
     hook_config,
     config,
-    log_prefix,
     config_paths,
     borgmatic_runtime_directory,
     patterns,
     dry_run,
 ):
     '''
-    Given a ZFS configuration dict, a configuration dict, a log prefix, the borgmatic configuration
-    file paths, the borgmatic runtime directory, the configured patterns, and whether this is a dry
-    run, auto-detect and snapshot any ZFS dataset mount points listed in the given patterns and any
+    Given a ZFS configuration dict, a configuration dict, the borgmatic configuration file paths,
+    the borgmatic runtime directory, the configured patterns, and whether this is a dry run,
+    auto-detect and snapshot any ZFS dataset mount points listed in the given patterns and any
     dataset with a borgmatic-specific user property. Also update those patterns, replacing dataset
     mount points with corresponding snapshot directories so they get stored in the Borg archive
-    instead. Use the log prefix in any log entries.
+    instead.
 
     Return an empty sequence, since there are no ongoing dump processes from this hook.
 
     If this is a dry run, then don't actually snapshot anything.
     '''
     dry_run_label = ' (dry run; not actually snapshotting anything)' if dry_run else ''
-    logger.info(f'{log_prefix}: Snapshotting ZFS datasets{dry_run_label}')
+    logger.info(f'Snapshotting ZFS datasets{dry_run_label}')
 
-    # List ZFS datasets to get their mount points.
+    # List ZFS datasets to get their mount points, but only consider those patterns that came from
+    # actual user configuration (as opposed to, say, other hooks).
     zfs_command = hook_config.get('zfs_command', 'zfs')
     requested_datasets = get_datasets_to_backup(zfs_command, patterns)
 
@@ -219,12 +256,12 @@ def dump_data_sources(
     normalized_runtime_directory = os.path.normpath(borgmatic_runtime_directory)
 
     if not requested_datasets:
-        logger.warning(f'{log_prefix}: No ZFS datasets found to snapshot{dry_run_label}')
+        logger.warning(f'No ZFS datasets found to snapshot{dry_run_label}')
 
     for dataset in requested_datasets:
         full_snapshot_name = f'{dataset.name}@{snapshot_name}'
         logger.debug(
-            f'{log_prefix}: Creating ZFS snapshot {full_snapshot_name} of {dataset.mount_point}{dry_run_label}'
+            f'Creating ZFS snapshot {full_snapshot_name} of {dataset.mount_point}{dry_run_label}'
         )
 
         if not dry_run:
@@ -235,11 +272,14 @@ def dump_data_sources(
         snapshot_mount_path = os.path.join(
             normalized_runtime_directory,
             'zfs_snapshots',
+            hashlib.shake_256(dataset.mount_point.encode('utf-8')).hexdigest(
+                MOUNT_POINT_HASH_LENGTH
+            ),
             dataset.mount_point.lstrip(os.path.sep),
         )
 
         logger.debug(
-            f'{log_prefix}: Mounting ZFS snapshot {full_snapshot_name} at {snapshot_mount_path}{dry_run_label}'
+            f'Mounting ZFS snapshot {full_snapshot_name} at {snapshot_mount_path}{dry_run_label}'
         )
 
         if dry_run:
@@ -250,7 +290,9 @@ def dump_data_sources(
         )
 
         for pattern in dataset.contained_patterns:
-            snapshot_pattern = make_borg_snapshot_pattern(pattern, normalized_runtime_directory)
+            snapshot_pattern = make_borg_snapshot_pattern(
+                pattern, dataset, normalized_runtime_directory
+            )
 
             # Attempt to update the pattern in place, since pattern order matters to Borg.
             try:
@@ -306,12 +348,12 @@ def get_all_snapshots(zfs_command):
     return tuple(line.rstrip() for line in list_output.splitlines())
 
 
-def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_directory, dry_run):
+def remove_data_source_dumps(hook_config, config, borgmatic_runtime_directory, dry_run):
     '''
-    Given a ZFS configuration dict, a configuration dict, a log prefix, the borgmatic runtime
-    directory, and whether this is a dry run, unmount and destroy any ZFS snapshots created by
-    borgmatic. Use the log prefix in any log entries. If this is a dry run or ZFS isn't configured
-    in borgmatic's configuration, then don't actually remove anything.
+    Given a ZFS configuration dict, a configuration dict, the borgmatic runtime directory, and
+    whether this is a dry run, unmount and destroy any ZFS snapshots created by borgmatic. If this
+    is a dry run or ZFS isn't configured in borgmatic's configuration, then don't actually remove
+    anything.
     '''
     if hook_config is None:
         return
@@ -324,10 +366,10 @@ def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_
     try:
         dataset_mount_points = get_all_dataset_mount_points(zfs_command)
     except FileNotFoundError:
-        logger.debug(f'{log_prefix}: Could not find "{zfs_command}" command')
+        logger.debug(f'Could not find "{zfs_command}" command')
         return
     except subprocess.CalledProcessError as error:
-        logger.debug(f'{log_prefix}: {error}')
+        logger.debug(error)
         return
 
     snapshots_glob = os.path.join(
@@ -335,10 +377,9 @@ def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_
             os.path.normpath(borgmatic_runtime_directory),
         ),
         'zfs_snapshots',
+        '*',
     )
-    logger.debug(
-        f'{log_prefix}: Looking for snapshots to remove in {snapshots_glob}{dry_run_label}'
-    )
+    logger.debug(f'Looking for snapshots to remove in {snapshots_glob}{dry_run_label}')
     umount_command = hook_config.get('umount_command', 'umount')
 
     for snapshots_directory in glob.glob(snapshots_glob):
@@ -349,7 +390,10 @@ def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_
         # child datasets before the shorter mount point paths of parent datasets.
         for mount_point in reversed(dataset_mount_points):
             snapshot_mount_path = os.path.join(snapshots_directory, mount_point.lstrip(os.path.sep))
-            if not os.path.isdir(snapshot_mount_path):
+
+            # If the snapshot mount path is empty, this is probably just a "shadow" of a nested
+            # dataset and therefore there's nothing to unmount.
+            if not os.path.isdir(snapshot_mount_path) or not os.listdir(snapshot_mount_path):
                 continue
 
             # This might fail if the path is already mounted, but we swallow errors here since we'll
@@ -363,22 +407,20 @@ def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_
                 if not os.path.isdir(snapshot_mount_path):
                     continue
 
-            logger.debug(
-                f'{log_prefix}: Unmounting ZFS snapshot at {snapshot_mount_path}{dry_run_label}'
-            )
+            logger.debug(f'Unmounting ZFS snapshot at {snapshot_mount_path}{dry_run_label}')
 
             if not dry_run:
                 try:
                     unmount_snapshot(umount_command, snapshot_mount_path)
                 except FileNotFoundError:
-                    logger.debug(f'{log_prefix}: Could not find "{umount_command}" command')
+                    logger.debug(f'Could not find "{umount_command}" command')
                     return
                 except subprocess.CalledProcessError as error:
-                    logger.debug(f'{log_prefix}: {error}')
-                    return
+                    logger.debug(error)
+                    continue
 
         if not dry_run:
-            shutil.rmtree(snapshots_directory)
+            shutil.rmtree(snapshot_mount_path, ignore_errors=True)
 
     # Destroy snapshots.
     full_snapshot_names = get_all_snapshots(zfs_command)
@@ -388,14 +430,14 @@ def remove_data_source_dumps(hook_config, config, log_prefix, borgmatic_runtime_
         if not full_snapshot_name.split('@')[-1].startswith(BORGMATIC_SNAPSHOT_PREFIX):
             continue
 
-        logger.debug(f'{log_prefix}: Destroying ZFS snapshot {full_snapshot_name}{dry_run_label}')
+        logger.debug(f'Destroying ZFS snapshot {full_snapshot_name}{dry_run_label}')
 
         if not dry_run:
             destroy_snapshot(zfs_command, full_snapshot_name)
 
 
 def make_data_source_dump_patterns(
-    hook_config, config, log_prefix, borgmatic_runtime_directory, name=None
+    hook_config, config, borgmatic_runtime_directory, name=None
 ):  # pragma: no cover
     '''
     Restores aren't implemented, because stored files can be extracted directly with "extract".
@@ -406,7 +448,6 @@ def make_data_source_dump_patterns(
 def restore_data_source_dump(
     hook_config,
     config,
-    log_prefix,
     data_source,
     dry_run,
     extract_process,

borgmatic/hooks/dispatch.py

@@ -3,6 +3,8 @@ import importlib
 import logging
 import pkgutil
 
+import borgmatic.hooks.command
+import borgmatic.hooks.credential
 import borgmatic.hooks.data_source
 import borgmatic.hooks.monitoring
 
@@ -10,6 +12,7 @@ logger = logging.getLogger(__name__)
 
 
 class Hook_type(enum.Enum):
+    CREDENTIAL = 'credential'
     DATA_SOURCE = 'data_source'
     MONITORING = 'monitoring'
 
@@ -21,12 +24,12 @@ def get_submodule_names(parent_module):  # pragma: no cover
     return tuple(module_info.name for module_info in pkgutil.iter_modules(parent_module.__path__))
 
 
-def call_hook(function_name, config, log_prefix, hook_name, *args, **kwargs):
+def call_hook(function_name, config, hook_name, *args, **kwargs):
     '''
-    Given a configuration dict and a prefix to use in log entries, call the requested function of
-    the Python module corresponding to the given hook name. Supply that call with the configuration
-    for this hook (if any), the log prefix, and any given args and kwargs. Return the return value
-    of that call or None if the module in question is not a hook.
+    Given a configuration dict, call the requested function of the Python module corresponding to
+    the given hook name. Supply that call with the configuration for this hook (if any) and any
+    given args and kwargs. Return the return value of that call or None if the module in question is
+    not a hook.
 
     Raise ValueError if the hook name is unknown.
     Raise AttributeError if the function name is not found in the module.
@@ -40,7 +43,11 @@ def call_hook(function_name, config, log_prefix, hook_name, *args, **kwargs):
     module_name = hook_name.split('_databases')[0]
 
     # Probe for a data source or monitoring hook module corresponding to the hook name.
-    for parent_module in (borgmatic.hooks.data_source, borgmatic.hooks.monitoring):
+    for parent_module in (
+        borgmatic.hooks.credential,
+        borgmatic.hooks.data_source,
+        borgmatic.hooks.monitoring,
+    ):
         if module_name not in get_submodule_names(parent_module):
             continue
 
@@ -54,17 +61,16 @@ def call_hook(function_name, config, log_prefix, hook_name, *args, **kwargs):
     else:
         raise ValueError(f'Unknown hook name: {hook_name}')
 
-    logger.debug(f'{log_prefix}: Calling {hook_name} hook function {function_name}')
+    logger.debug(f'Calling {hook_name} hook function {function_name}')
 
-    return getattr(module, function_name)(hook_config, config, log_prefix, *args, **kwargs)
+    return getattr(module, function_name)(hook_config, config, *args, **kwargs)
 
 
-def call_hooks(function_name, config, log_prefix, hook_type, *args, **kwargs):
+def call_hooks(function_name, config, hook_type, *args, **kwargs):
     '''
-    Given a configuration dict and a prefix to use in log entries, call the requested function of
-    the Python module corresponding to each hook of the given hook type (either "data_source" or
-    "monitoring"). Supply each call with the configuration for that hook, the log prefix, and any
-    given args and kwargs.
+    Given a configuration dict, call the requested function of the Python module corresponding to
+    each hook of the given hook type ("credential", "data_source", or "monitoring"). Supply each
+    call with the configuration for that hook, and any given args and kwargs.
 
     Collect any return values into a dict from module name to return value. Note that the module
     name is the name of the hook module itself, which might be different from the hook configuration
@@ -78,7 +84,7 @@ def call_hooks(function_name, config, log_prefix, hook_type, *args, **kwargs):
     Raise anything else that a called function raises. An error stops calls to subsequent functions.
     '''
     return {
-        hook_name: call_hook(function_name, config, log_prefix, hook_name, *args, **kwargs)
+        hook_name: call_hook(function_name, config, hook_name, *args, **kwargs)
         for hook_name in get_submodule_names(
             importlib.import_module(f'borgmatic.hooks.{hook_type.value}')
         )
@@ -86,18 +92,18 @@ def call_hooks(function_name, config, log_prefix, hook_type, *args, **kwargs):
     }
 
 
-def call_hooks_even_if_unconfigured(function_name, config, log_prefix, hook_type, *args, **kwargs):
+def call_hooks_even_if_unconfigured(function_name, config, hook_type, *args, **kwargs):
     '''
-    Given a configuration dict and a prefix to use in log entries, call the requested function of
-    the Python module corresponding to each hook of the given hook type (either "data_source" or
-    "monitoring"). Supply each call with the configuration for that hook, the log prefix, and any
-    given args and kwargs. Collect any return values into a dict from hook name to return value.
+    Given a configuration dict, call the requested function of the Python module corresponding to
+    each hook of the given hook type ("credential", "data_source", or "monitoring"). Supply each
+    call with the configuration for that hook and any given args and kwargs. Collect any return
+    values into a dict from hook name to return value.
 
     Raise AttributeError if the function name is not found in the module.
     Raise anything else that a called function raises. An error stops calls to subsequent functions.
     '''
     return {
-        hook_name: call_hook(function_name, config, log_prefix, hook_name, *args, **kwargs)
+        hook_name: call_hook(function_name, config, hook_name, *args, **kwargs)
         for hook_name in get_submodule_names(
             importlib.import_module(f'borgmatic.hooks.{hook_type.value}')
         )

borgmatic/hooks/monitoring/apprise.py

@@ -66,12 +66,12 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
     )
 
     if not hook_config.get('services'):
-        logger.info(f'{config_filename}: No Apprise services to ping')
+        logger.info('No Apprise services to ping')
         return
 
     dry_run_string = ' (dry run; not actually pinging)' if dry_run else ''
     labels_string = ', '.join(map(operator.itemgetter('label'), hook_config.get('services')))
-    logger.info(f'{config_filename}: Pinging Apprise services: {labels_string}{dry_run_string}')
+    logger.info(f'Pinging Apprise services: {labels_string}{dry_run_string}')
 
     apprise_object = apprise.Apprise()
     apprise_object.add(list(map(operator.itemgetter('url'), hook_config.get('services'))))
@@ -100,10 +100,10 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
     )
 
     if result is False:
-        logger.warning(f'{config_filename}: Error sending some Apprise notifications')
+        logger.warning('Error sending some Apprise notifications')
 
 
-def destroy_monitor(hook_config, config, config_filename, monitoring_log_level, dry_run):
+def destroy_monitor(hook_config, config, monitoring_log_level, dry_run):
     '''
     Remove the monitor handler that was added to the root logger. This prevents the handler from
     getting reused by other instances of this monitor.

borgmatic/hooks/monitoring/cronhub.py

@@ -28,9 +28,7 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
     filename in any log entries. If this is a dry run, then don't actually ping anything.
     '''
     if state not in MONITOR_STATE_TO_CRONHUB:
-        logger.debug(
-            f'{config_filename}: Ignoring unsupported monitoring {state.name.lower()} in Cronhub hook'
-        )
+        logger.debug(f'Ignoring unsupported monitoring state {state.name.lower()} in Cronhub hook')
         return
 
     dry_run_label = ' (dry run; not actually pinging)' if dry_run else ''
@@ -41,8 +39,8 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
         .replace('/ping/', formatted_state)
     )
 
-    logger.info(f'{config_filename}: Pinging Cronhub {state.name.lower()}{dry_run_label}')
-    logger.debug(f'{config_filename}: Using Cronhub ping URL {ping_url}')
+    logger.info(f'Pinging Cronhub {state.name.lower()}{dry_run_label}')
+    logger.debug(f'Using Cronhub ping URL {ping_url}')
 
     if not dry_run:
         logging.getLogger('urllib3').setLevel(logging.ERROR)
@@ -51,12 +49,10 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
             if not response.ok:
                 response.raise_for_status()
         except requests.exceptions.RequestException as error:
-            logger.warning(f'{config_filename}: Cronhub error: {error}')
+            logger.warning(f'Cronhub error: {error}')
 
 
-def destroy_monitor(
-    ping_url_or_uuid, config, config_filename, monitoring_log_level, dry_run
-):  # pragma: no cover
+def destroy_monitor(ping_url_or_uuid, config, monitoring_log_level, dry_run):  # pragma: no cover
     '''
     No destruction is necessary for this monitor.
     '''

borgmatic/hooks/monitoring/cronitor.py

@@ -28,16 +28,14 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
     filename in any log entries. If this is a dry run, then don't actually ping anything.
     '''
     if state not in MONITOR_STATE_TO_CRONITOR:
-        logger.debug(
-            f'{config_filename}: Ignoring unsupported monitoring {state.name.lower()} in Cronitor hook'
-        )
+        logger.debug(f'Ignoring unsupported monitoring state {state.name.lower()} in Cronitor hook')
         return
 
     dry_run_label = ' (dry run; not actually pinging)' if dry_run else ''
     ping_url = f"{hook_config['ping_url']}/{MONITOR_STATE_TO_CRONITOR[state]}"
 
-    logger.info(f'{config_filename}: Pinging Cronitor {state.name.lower()}{dry_run_label}')
-    logger.debug(f'{config_filename}: Using Cronitor ping URL {ping_url}')
+    logger.info(f'Pinging Cronitor {state.name.lower()}{dry_run_label}')
+    logger.debug(f'Using Cronitor ping URL {ping_url}')
 
     if not dry_run:
         logging.getLogger('urllib3').setLevel(logging.ERROR)
@@ -46,12 +44,10 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
             if not response.ok:
                 response.raise_for_status()
         except requests.exceptions.RequestException as error:
-            logger.warning(f'{config_filename}: Cronitor error: {error}')
+            logger.warning(f'Cronitor error: {error}')
 
 
-def destroy_monitor(
-    ping_url_or_uuid, config, config_filename, monitoring_log_level, dry_run
-):  # pragma: no cover
+def destroy_monitor(ping_url_or_uuid, config, monitoring_log_level, dry_run):  # pragma: no cover
     '''
     No destruction is necessary for this monitor.
     '''

borgmatic/hooks/monitoring/healthchecks.py

@@ -55,9 +55,7 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
     dry_run_label = ' (dry run; not actually pinging)' if dry_run else ''
 
     if 'states' in hook_config and state.name.lower() not in hook_config['states']:
-        logger.info(
-            f'{config_filename}: Skipping Healthchecks {state.name.lower()} ping due to configured states'
-        )
+        logger.info(f'Skipping Healthchecks {state.name.lower()} ping due to configured states')
         return
 
     ping_url_is_uuid = re.search(r'\w{8}-\w{4}-\w{4}-\w{4}-\w{12}$', ping_url)
@@ -68,14 +66,12 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
 
     if hook_config.get('create_slug'):
         if ping_url_is_uuid:
-            logger.warning(
-                f'{config_filename}: Healthchecks UUIDs do not support auto provisionning; ignoring'
-            )
+            logger.warning('Healthchecks UUIDs do not support auto provisionning; ignoring')
         else:
             ping_url = f'{ping_url}?create=1'
 
-    logger.info(f'{config_filename}: Pinging Healthchecks {state.name.lower()}{dry_run_label}')
-    logger.debug(f'{config_filename}: Using Healthchecks ping URL {ping_url}')
+    logger.info(f'Pinging Healthchecks {state.name.lower()}{dry_run_label}')
+    logger.debug(f'Using Healthchecks ping URL {ping_url}')
 
     if state in (monitor.State.FINISH, monitor.State.FAIL, monitor.State.LOG):
         payload = borgmatic.hooks.monitoring.logs.format_buffered_logs_for_payload(
@@ -93,10 +89,10 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
             if not response.ok:
                 response.raise_for_status()
         except requests.exceptions.RequestException as error:
-            logger.warning(f'{config_filename}: Healthchecks error: {error}')
+            logger.warning(f'Healthchecks error: {error}')
 
 
-def destroy_monitor(hook_config, config, config_filename, monitoring_log_level, dry_run):
+def destroy_monitor(hook_config, config, monitoring_log_level, dry_run):
     '''
     Remove the monitor handler that was added to the root logger. This prevents the handler from
     getting reused by other instances of this monitor.

borgmatic/hooks/monitoring/logs.py

@@ -38,11 +38,13 @@ class Forgetful_buffering_handler(logging.Handler):
             self.forgot = True
 
 
-def add_handler(handler):  # pragma: no cover
+def add_handler(handler):
     '''
     Add the given handler to the global logger.
     '''
-    logging.getLogger().addHandler(handler)
+    logger = logging.getLogger()
+    logger.addHandler(handler)
+    logger.setLevel(min(handler.level for handler in logger.handlers))
 
 
 def get_handler(identifier):
@@ -64,7 +66,7 @@ def get_handler(identifier):
 def format_buffered_logs_for_payload(identifier):
     '''
     Get the handler previously added to the root logger, and slurp buffered logs out of it to
-    send to Healthchecks.
+    send to the monitoring service.
     '''
     try:
         buffering_handler = get_handler(identifier)
@@ -90,3 +92,5 @@ def remove_handler(identifier):
         logger.removeHandler(get_handler(identifier))
     except ValueError:
         pass
+
+    logger.setLevel(min(handler.level for handler in logger.handlers))

borgmatic/hooks/monitoring/loki.py

@@ -139,10 +139,10 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
     for handler in tuple(logging.getLogger().handlers):
         if isinstance(handler, Loki_log_handler):
             if state in MONITOR_STATE_TO_LOKI.keys():
-                handler.raw(f'{config_filename}: {MONITOR_STATE_TO_LOKI[state]} backup')
+                handler.raw(f'{MONITOR_STATE_TO_LOKI[state]} backup')
 
 
-def destroy_monitor(hook_config, config, config_filename, monitoring_log_level, dry_run):
+def destroy_monitor(hook_config, config, monitoring_log_level, dry_run):
     '''
     Remove the monitor handler that was added to the root logger.
     '''

borgmatic/hooks/monitoring/ntfy.py

@@ -2,6 +2,8 @@ import logging
 
 import requests
 
+import borgmatic.hooks.credential.parse
+
 logger = logging.getLogger(__name__)
 
 
@@ -37,8 +39,8 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
         base_url = hook_config.get('server', 'https://ntfy.sh')
         topic = hook_config.get('topic')
 
-        logger.info(f'{config_filename}: Pinging ntfy topic {topic}{dry_run_label}')
-        logger.debug(f'{config_filename}: Using Ntfy ping URL {base_url}/{topic}')
+        logger.info(f'Pinging ntfy topic {topic}{dry_run_label}')
+        logger.debug(f'Using Ntfy ping URL {base_url}/{topic}')
 
         headers = {
             'X-Title': state_config.get('title'),
@@ -47,28 +49,35 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
             'X-Tags': state_config.get('tags'),
         }
 
-        username = hook_config.get('username')
-        password = hook_config.get('password')
-        access_token = hook_config.get('access_token')
+        try:
+            username = borgmatic.hooks.credential.parse.resolve_credential(
+                hook_config.get('username'), config
+            )
+            password = borgmatic.hooks.credential.parse.resolve_credential(
+                hook_config.get('password'), config
+            )
+            access_token = borgmatic.hooks.credential.parse.resolve_credential(
+                hook_config.get('access_token'), config
+            )
+        except ValueError as error:
+            logger.warning(f'Ntfy credential error: {error}')
+            return
+
         auth = None
 
         if access_token is not None:
             if username or password:
                 logger.warning(
-                    f'{config_filename}: ntfy access_token is set but so is username/password, only using access_token'
+                    'ntfy access_token is set but so is username/password, only using access_token'
                 )
             auth = requests.auth.HTTPBasicAuth('', access_token)
         elif (username and password) is not None:
             auth = requests.auth.HTTPBasicAuth(username, password)
-            logger.info(f'{config_filename}: Using basic auth with user {username} for ntfy')
+            logger.info(f'Using basic auth with user {username} for ntfy')
         elif username is not None:
-            logger.warning(
-                f'{config_filename}: Password missing for ntfy authentication, defaulting to no auth'
-            )
+            logger.warning('Password missing for ntfy authentication, defaulting to no auth')
         elif password is not None:
-            logger.warning(
-                f'{config_filename}: Username missing for ntfy authentication, defaulting to no auth'
-            )
+            logger.warning('Username missing for ntfy authentication, defaulting to no auth')
 
         if not dry_run:
             logging.getLogger('urllib3').setLevel(logging.ERROR)
@@ -77,12 +86,10 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
                 if not response.ok:
                     response.raise_for_status()
             except requests.exceptions.RequestException as error:
-                logger.warning(f'{config_filename}: ntfy error: {error}')
+                logger.warning(f'ntfy error: {error}')
 
 
-def destroy_monitor(
-    ping_url_or_uuid, config, config_filename, monitoring_log_level, dry_run
-):  # pragma: no cover
+def destroy_monitor(ping_url_or_uuid, config, monitoring_log_level, dry_run):  # pragma: no cover
     '''
     No destruction is necessary for this monitor.
     '''

borgmatic/hooks/monitoring/pagerduty.py

@@ -5,20 +5,37 @@ import platform
 
 import requests
 
+import borgmatic.hooks.credential.parse
+import borgmatic.hooks.monitoring.logs
 from borgmatic.hooks.monitoring import monitor
 
 logger = logging.getLogger(__name__)
 
 EVENTS_API_URL = 'https://events.pagerduty.com/v2/enqueue'
+DEFAULT_LOGS_PAYLOAD_LIMIT_BYTES = 10000
+HANDLER_IDENTIFIER = 'pagerduty'
 
 
-def initialize_monitor(
-    integration_key, config, config_filename, monitoring_log_level, dry_run
-):  # pragma: no cover
+def initialize_monitor(hook_config, config, config_filename, monitoring_log_level, dry_run):
     '''
-    No initialization is necessary for this monitor.
+    Add a handler to the root logger that stores in memory the most recent logs emitted. That way,
+    we can send them all to PagerDuty upon a failure state. But skip this if the "send_logs" option
+    is false.
     '''
-    pass
+    if hook_config.get('send_logs') is False:
+        return
+
+    ping_body_limit = max(
+        DEFAULT_LOGS_PAYLOAD_LIMIT_BYTES
+        - len(borgmatic.hooks.monitoring.logs.PAYLOAD_TRUNCATION_INDICATOR),
+        0,
+    )
+
+    borgmatic.hooks.monitoring.logs.add_handler(
+        borgmatic.hooks.monitoring.logs.Forgetful_buffering_handler(
+            HANDLER_IDENTIFIER, ping_body_limit, monitoring_log_level
+        )
+    )
 
 
 def ping_monitor(hook_config, config, config_filename, state, monitoring_log_level, dry_run):
@@ -29,21 +46,30 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
     '''
     if state != monitor.State.FAIL:
         logger.debug(
-            f'{config_filename}: Ignoring unsupported monitoring {state.name.lower()} in PagerDuty hook',
+            f'Ignoring unsupported monitoring state {state.name.lower()} in PagerDuty hook',
         )
         return
 
     dry_run_label = ' (dry run; not actually sending)' if dry_run else ''
-    logger.info(f'{config_filename}: Sending failure event to PagerDuty {dry_run_label}')
+    logger.info(f'Sending failure event to PagerDuty {dry_run_label}')
 
-    if dry_run:
+    try:
+        integration_key = borgmatic.hooks.credential.parse.resolve_credential(
+            hook_config.get('integration_key'), config
+        )
+    except ValueError as error:
+        logger.warning(f'PagerDuty credential error: {error}')
         return
 
+    logs_payload = borgmatic.hooks.monitoring.logs.format_buffered_logs_for_payload(
+        HANDLER_IDENTIFIER
+    )
+
     hostname = platform.node()
     local_timestamp = datetime.datetime.now(datetime.timezone.utc).astimezone().isoformat()
     payload = json.dumps(
         {
-            'routing_key': hook_config['integration_key'],
+            'routing_key': integration_key,
             'event_action': 'trigger',
             'payload': {
                 'summary': f'backup failed on {hostname}',
@@ -57,11 +83,14 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
                     'hostname': hostname,
                     'configuration filename': config_filename,
                     'server time': local_timestamp,
+                    'logs': logs_payload,
                 },
             },
         }
     )
-    logger.debug(f'{config_filename}: Using PagerDuty payload: {payload}')
+
+    if dry_run:
+        return
 
     logging.getLogger('urllib3').setLevel(logging.ERROR)
     try:
@@ -69,13 +98,12 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
         if not response.ok:
             response.raise_for_status()
     except requests.exceptions.RequestException as error:
-        logger.warning(f'{config_filename}: PagerDuty error: {error}')
+        logger.warning(f'PagerDuty error: {error}')
 
 
-def destroy_monitor(
-    ping_url_or_uuid, config, config_filename, monitoring_log_level, dry_run
-):  # pragma: no cover
+def destroy_monitor(ping_url_or_uuid, config, monitoring_log_level, dry_run):  # pragma: no cover
     '''
-    No destruction is necessary for this monitor.
+    Remove the monitor handler that was added to the root logger. This prevents the handler from
+    getting reused by other instances of this monitor.
     '''
-    pass
+    borgmatic.hooks.monitoring.logs.remove_handler(HANDLER_IDENTIFIER)

borgmatic/hooks/monitoring/pushover.py

@@ -2,6 +2,8 @@ import logging
 
 import requests
 
+import borgmatic.hooks.credential.parse
+
 logger = logging.getLogger(__name__)
 
 
@@ -32,17 +34,23 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
 
     state_config = hook_config.get(state.name.lower(), {})
 
-    token = hook_config.get('token')
-    user = hook_config.get('user')
+    try:
+        token = borgmatic.hooks.credential.parse.resolve_credential(
+            hook_config.get('token'), config
+        )
+        user = borgmatic.hooks.credential.parse.resolve_credential(hook_config.get('user'), config)
+    except ValueError as error:
+        logger.warning(f'Pushover credential error: {error}')
+        return
 
-    logger.info(f'{config_filename}: Updating Pushover{dry_run_label}')
+    logger.info(f'Updating Pushover{dry_run_label}')
 
     if state_config.get('priority') == EMERGENCY_PRIORITY:
         if 'expire' not in state_config:
-            logger.info(f'{config_filename}: Setting expire to default (10 min).')
+            logger.info('Setting expire to default (10 min)')
             state_config['expire'] = 600
         if 'retry' not in state_config:
-            logger.info(f'{config_filename}: Setting retry to default (30 sec).')
+            logger.info('Setting retry to default (30 sec)')
             state_config['retry'] = 30
     else:
         if 'expire' in state_config or 'retry' in state_config:
@@ -75,12 +83,10 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
             if not response.ok:
                 response.raise_for_status()
         except requests.exceptions.RequestException as error:
-            logger.warning(f'{config_filename}: Pushover error: {error}')
+            logger.warning(f'Pushover error: {error}')
 
 
-def destroy_monitor(
-    ping_url_or_uuid, config, config_filename, monitoring_log_level, dry_run
-):  # pragma: no cover
+def destroy_monitor(ping_url_or_uuid, config, monitoring_log_level, dry_run):  # pragma: no cover
     '''
     No destruction is necessary for this monitor.
     '''

borgmatic/hooks/monitoring/sentry.py

@@ -16,7 +16,7 @@ def initialize_monitor(
 
 
 DATA_SOURCE_NAME_URL_PATTERN = re.compile(
-    '^(?P<protocol>.*)://(?P<username>.*)@(?P<hostname>.*)/(?P<project_id>.*)$'
+    '^(?P<protocol>.+)://(?P<username>.+)@(?P<hostname>.+)/(?P<project_id>.+)$'
 )
 
 
@@ -38,15 +38,13 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
     match = DATA_SOURCE_NAME_URL_PATTERN.match(data_source_name_url)
 
     if not match:
-        logger.warning(
-            'f{config_filename}: Invalid Sentry data source name URL: {data_source_name_url}'
-        )
+        logger.warning(f'Invalid Sentry data source name URL: {data_source_name_url}')
         return
 
     cron_url = f'{match.group("protocol")}://{match.group("hostname")}/api/{match.group("project_id")}/cron/{monitor_slug}/{match.group("username")}/'
 
-    logger.info(f'{config_filename}: Pinging Sentry {state.name.lower()}{dry_run_label}')
-    logger.debug(f'{config_filename}: Using Sentry cron URL {cron_url}')
+    logger.info(f'Pinging Sentry {state.name.lower()}{dry_run_label}')
+    logger.debug(f'Using Sentry cron URL {cron_url}')
 
     status = {
         'start': 'in_progress',
@@ -55,7 +53,7 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
     }.get(state.name.lower())
 
     if not status:
-        logger.warning('f{config_filename}: Invalid Sentry state')
+        logger.warning('Invalid Sentry state')
         return
 
     if dry_run:
@@ -67,12 +65,10 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
         if not response.ok:
             response.raise_for_status()
     except requests.exceptions.RequestException as error:
-        logger.warning(f'{config_filename}: Sentry error: {error}')
+        logger.warning(f'Sentry error: {error}')
 
 
-def destroy_monitor(
-    ping_url_or_uuid, config, config_filename, monitoring_log_level, dry_run
-):  # pragma: no cover
+def destroy_monitor(ping_url_or_uuid, config, monitoring_log_level, dry_run):  # pragma: no cover
     '''
     No destruction is necessary for this monitor.
     '''

borgmatic/hooks/monitoring/uptime_kuma.py

@@ -28,10 +28,8 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
     status = 'down' if state.name.lower() == 'fail' else 'up'
     push_url = hook_config.get('push_url', 'https://example.uptime.kuma/api/push/abcd1234')
     query = f'status={status}&msg={state.name.lower()}'
-    logger.info(
-        f'{config_filename}: Pushing Uptime Kuma push_url {push_url}?{query} {dry_run_label}'
-    )
-    logger.debug(f'{config_filename}: Full Uptime Kuma state URL {push_url}?{query}')
+    logger.info(f'Pushing Uptime Kuma push_url {push_url}?{query} {dry_run_label}')
+    logger.debug(f'Full Uptime Kuma state URL {push_url}?{query}')
 
     if dry_run:
         return
@@ -39,16 +37,14 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
     logging.getLogger('urllib3').setLevel(logging.ERROR)
 
     try:
-        response = requests.get(f'{push_url}?{query}')
+        response = requests.get(f'{push_url}?{query}', verify=hook_config.get('verify_tls', True))
         if not response.ok:
             response.raise_for_status()
     except requests.exceptions.RequestException as error:
-        logger.warning(f'{config_filename}: Uptime Kuma error: {error}')
+        logger.warning(f'Uptime Kuma error: {error}')
 
 
-def destroy_monitor(
-    push_url_or_uuid, config, config_filename, monitoring_log_level, dry_run
-):  # pragma: no cover
+def destroy_monitor(push_url_or_uuid, config, monitoring_log_level, dry_run):  # pragma: no cover
     '''
     No destruction is necessary for this monitor.
     '''

borgmatic/hooks/monitoring/zabbix.py

@@ -2,6 +2,8 @@ import logging
 
 import requests
 
+import borgmatic.hooks.credential.parse
+
 logger = logging.getLogger(__name__)
 
 
@@ -14,6 +16,42 @@ def initialize_monitor(
     pass
 
 
+def send_zabbix_request(server, headers, data):
+    '''
+    Given a Zabbix server URL, HTTP headers as a dict, and valid Zabbix JSON payload data as a dict,
+    send a request to the Zabbix server via API.
+
+    Return the response "result" value or None.
+    '''
+    logging.getLogger('urllib3').setLevel(logging.ERROR)
+
+    logger.debug(f'Sending a "{data["method"]}" request to the Zabbix server')
+
+    try:
+        response = requests.post(server, headers=headers, json=data)
+
+        if not response.ok:
+            response.raise_for_status()
+    except requests.exceptions.RequestException as error:
+        logger.warning(f'Zabbix error: {error}')
+
+        return None
+
+    try:
+        result = response.json().get('result')
+        error_message = result['data'][0]['error']
+    except requests.exceptions.JSONDecodeError:
+        logger.warning('Zabbix error: Cannot parse API response')
+
+        return None
+    except (TypeError, KeyError, IndexError):
+        return result
+    else:
+        logger.warning(f'Zabbix error: {error_message}')
+
+        return None
+
+
 def ping_monitor(hook_config, config, config_filename, state, monitoring_log_level, dry_run):
     '''
     Update the configured Zabbix item using either the itemid, or a host and key.
@@ -34,26 +72,34 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
         },
     )
 
+    try:
+        username = borgmatic.hooks.credential.parse.resolve_credential(
+            hook_config.get('username'), config
+        )
+        password = borgmatic.hooks.credential.parse.resolve_credential(
+            hook_config.get('password'), config
+        )
+        api_key = borgmatic.hooks.credential.parse.resolve_credential(
+            hook_config.get('api_key'), config
+        )
+    except ValueError as error:
+        logger.warning(f'Zabbix credential error: {error}')
+
+        return
+
     server = hook_config.get('server')
-    username = hook_config.get('username')
-    password = hook_config.get('password')
-    api_key = hook_config.get('api_key')
     itemid = hook_config.get('itemid')
     host = hook_config.get('host')
     key = hook_config.get('key')
     value = state_config.get('value')
     headers = {'Content-Type': 'application/json-rpc'}
 
-    logger.info(f'{config_filename}: Updating Zabbix{dry_run_label}')
-    logger.debug(f'{config_filename}: Using Zabbix URL: {server}')
-
-    if server is None:
-        logger.warning(f'{config_filename}: Server missing for Zabbix')
-        return
+    logger.info(f'Pinging Zabbix{dry_run_label}')
+    logger.debug(f'Using Zabbix URL: {server}')
 
     # Determine the Zabbix method used to store the value: itemid or host/key
     if itemid is not None:
-        logger.info(f'{config_filename}: Updating {itemid} on Zabbix')
+        logger.info(f'Updating {itemid} on Zabbix')
         data = {
             'jsonrpc': '2.0',
             'method': 'history.push',
@@ -61,8 +107,8 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
             'id': 1,
         }
 
-    elif (host and key) is not None:
-        logger.info(f'{config_filename}: Updating Host:{host} and Key:{key} on Zabbix')
+    elif host is not None and key is not None:
+        logger.info(f'Updating Host: "{host}" and Key: "{key}" on Zabbix')
         data = {
             'jsonrpc': '2.0',
             'method': 'history.push',
@@ -71,64 +117,67 @@ def ping_monitor(hook_config, config, config_filename, state, monitoring_log_lev
         }
 
     elif host is not None:
-        logger.warning(f'{config_filename}: Key missing for Zabbix')
-        return
+        logger.warning('Key missing for Zabbix')
 
+        return
     elif key is not None:
-        logger.warning(f'{config_filename}: Host missing for Zabbix.')
+        logger.warning('Host missing for Zabbix')
+
         return
     else:
-        logger.warning(f'{config_filename}: No zabbix itemid or host/key provided.')
+        logger.warning('No Zabbix itemid or host/key provided')
+
         return
 
     # Determine the authentication method: API key or username/password
     if api_key is not None:
-        logger.info(f'{config_filename}: Using API key auth for Zabbix')
-        headers['Authorization'] = 'Bearer ' + api_key
-
-    elif (username and password) is not None:
-        logger.info(f'{config_filename}: Using user/pass auth with user {username} for Zabbix')
-        auth_data = {
+        logger.info('Using API key auth for Zabbix')
+        headers['Authorization'] = f'Bearer {api_key}'
+    elif username is not None and password is not None:
+        logger.info(f'Using user/pass auth with user {username} for Zabbix')
+        login_data = {
             'jsonrpc': '2.0',
             'method': 'user.login',
             'params': {'username': username, 'password': password},
             'id': 1,
         }
+
         if not dry_run:
-            logging.getLogger('urllib3').setLevel(logging.ERROR)
-            try:
-                response = requests.post(server, headers=headers, json=auth_data)
-                data['auth'] = response.json().get('result')
-                if not response.ok:
-                    response.raise_for_status()
-            except requests.exceptions.RequestException as error:
-                logger.warning(f'{config_filename}: Zabbix error: {error}')
+            result = send_zabbix_request(server, headers, login_data)
+
+            if not result:
                 return
 
+            headers['Authorization'] = f'Bearer {result}'
     elif username is not None:
-        logger.warning(f'{config_filename}: Password missing for Zabbix authentication')
-        return
+        logger.warning('Password missing for Zabbix authentication')
 
+        return
     elif password is not None:
-        logger.warning(f'{config_filename}: Username missing for Zabbix authentication')
+        logger.warning('Username missing for Zabbix authentication')
+
         return
     else:
-        logger.warning(f'{config_filename}: Authentication data missing for Zabbix')
+        logger.warning('Authentication data missing for Zabbix')
+
         return
 
     if not dry_run:
-        logging.getLogger('urllib3').setLevel(logging.ERROR)
-        try:
-            response = requests.post(server, headers=headers, json=data)
-            if not response.ok:
-                response.raise_for_status()
-        except requests.exceptions.RequestException as error:
-            logger.warning(f'{config_filename}: Zabbix error: {error}')
+        send_zabbix_request(server, headers, data)
+
+    if username is not None and password is not None:
+        logout_data = {
+            'jsonrpc': '2.0',
+            'method': 'user.logout',
+            'params': [],
+            'id': 1,
+        }
+
+        if not dry_run:
+            send_zabbix_request(server, headers, logout_data)
 
 
-def destroy_monitor(
-    ping_url_or_uuid, config, config_filename, monitoring_log_level, dry_run
-):  # pragma: no cover
+def destroy_monitor(ping_url_or_uuid, config, monitoring_log_level, dry_run):  # pragma: no cover
     '''
     No destruction is necessary for this monitor.
     '''